RNA–Protein interactions for RNA: ENST00000524762.5

UBXN1-204, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 763 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-204ENST00000524762 BEGAINQ9BUH8 593 aa23.34■■□□□ 1.33
UBXN1-204ENST00000524762 TLR7Q9NYK1 1049 aaKnown RBP23.34■■□□□ 1.33
UBXN1-204ENST00000524762 RPAP1Q9BWH6 1393 aaPredicted RBP23.34■■□□□ 1.33
UBXN1-204ENST00000524762 HMMRO75330 724 aa23.33■■□□□ 1.33
UBXN1-204ENST00000524762 HSP90AB4PQ58FF6 505 aa23.33■■□□□ 1.33
UBXN1-204ENST00000524762 TTC39AQ5SRH9 613 aa23.33■■□□□ 1.33
UBXN1-204ENST00000524762 CDC42EP5Q6NZY7 148 aa23.33■■□□□ 1.33
UBXN1-204ENST00000524762 DZIP1Q86YF9 867 aaKnown RBP23.33■■□□□ 1.33
UBXN1-204ENST00000524762 ZNF384Q8TF68 577 aa23.33■■□□□ 1.33
UBXN1-204ENST00000524762 ZNF512BQ96KM6 892 aaPredicted RBP23.33■■□□□ 1.33
UBXN1-204ENST00000524762 PRDM10Q9NQV6 1147 aa23.33■■□□□ 1.33
UBXN1-204ENST00000524762 USP2O75604 605 aaPredicted RBP23.32■■□□□ 1.32
UBXN1-204ENST00000524762 LBX1P52954 281 aa23.32■■□□□ 1.32
UBXN1-204ENST00000524762 CCDC158Q5M9N0 1113 aa23.32■■□□□ 1.32
UBXN1-204ENST00000524762 ERICH6Q7L0X2 663 aa23.32■■□□□ 1.32
UBXN1-204ENST00000524762 FAM163AQ96GL9 167 aaPredicted RBP23.32■■□□□ 1.32
UBXN1-204ENST00000524762 CCDC8Q9H0W5 538 aaPredicted RBP23.32■■□□□ 1.32
UBXN1-204ENST00000524762 RFX7Q2KHR2 1363 aa23.31■■□□□ 1.32
UBXN1-204ENST00000524762 MYO5AQ9Y4I1 1855 aaKnown RBP23.31■■□□□ 1.32
UBXN1-204ENST00000524762 UNCXA6NJT0 531 aa23.31■■□□□ 1.32
UBXN1-204ENST00000524762 CA12O43570 354 aa23.31■■□□□ 1.32
UBXN1-204ENST00000524762 MECOMQ03112 1051 aa23.31■■□□□ 1.32
UBXN1-204ENST00000524762 TBC1D9Q6ZT07 1266 aa23.31■■□□□ 1.32
UBXN1-204ENST00000524762 RHPN1Q8TCX5 695 aa23.31■■□□□ 1.32
UBXN1-204ENST00000524762 MROH7-TTC4A0A0A0MT08 1334 aa23.31■■□□□ 1.32
UBXN1-204ENST00000524762 IREB2P48200 963 aaKnown RBP23.3■■□□□ 1.32
UBXN1-204ENST00000524762 SLF2Q8IX21 1173 aa23.3■■□□□ 1.32
UBXN1-204ENST00000524762 CLMNQ96JQ2 1002 aa23.3■■□□□ 1.32
UBXN1-204ENST00000524762 CSRNP1Q96S65 589 aa23.3■■□□□ 1.32
UBXN1-204ENST00000524762 RRP1P56182 461 aaKnown RBP23.29■■□□□ 1.32
UBXN1-204ENST00000524762 NFIAQ12857 509 aa23.29■■□□□ 1.32
UBXN1-204ENST00000524762 NSUN4Q96CB9 384 aaKnown RBP23.29■■□□□ 1.32
UBXN1-204ENST00000524762 SNRKQ9NRH2 765 aa23.29■■□□□ 1.32
UBXN1-204ENST00000524762 USP40Q9NVE5 1235 aa23.29■■□□□ 1.32
UBXN1-204ENST00000524762 TSKSQ9UJT2 592 aa23.29■■□□□ 1.32
UBXN1-204ENST00000524762 AACSQ86V21 672 aa23.28■■□□□ 1.32
UBXN1-204ENST00000524762 REM2Q8IYK8 340 aaPredicted RBP23.28■■□□□ 1.32
UBXN1-204ENST00000524762 FAM151AQ8WW52 585 aa23.28■■□□□ 1.32
UBXN1-204ENST00000524762 KIF1BPQ96EK5 621 aa23.28■■□□□ 1.32
UBXN1-204ENST00000524762 IL1RAPL2Q9NP60 686 aa23.28■■□□□ 1.32
UBXN1-204ENST00000524762 FAM198AQ9UFP1 575 aa23.28■■□□□ 1.32
UBXN1-204ENST00000524762 DOCK2Q92608 1830 aa23.28■■□□□ 1.32
UBXN1-204ENST00000524762 CYP2E1P05181 493 aaPredicted RBP23.27■■□□□ 1.32
UBXN1-204ENST00000524762 SPRYD7Q5W111 196 aa23.27■■□□□ 1.32
UBXN1-204ENST00000524762 ANKRD13AQ8IZ07 590 aa23.27■■□□□ 1.32
UBXN1-204ENST00000524762 SAGE1Q9NXZ1 904 aa23.27■■□□□ 1.32
UBXN1-204ENST00000524762 GPR75-ASB3A0A0A6YYF3 556 aa23.26■■□□□ 1.31
UBXN1-204ENST00000524762 RAB11FIP3O75154 756 aa23.26■■□□□ 1.31
UBXN1-204ENST00000524762 BTDP43251 543 aa23.26■■□□□ 1.31
UBXN1-204ENST00000524762 MKRN3Q13064 507 aaKnown RBP23.26■■□□□ 1.31
UBXN1-204ENST00000524762 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.26■■□□□ 1.314e-9■□□□□ 9
UBXN1-204ENST00000524762 SLC10A4Q96EP9 437 aa23.26■■□□□ 1.31
UBXN1-204ENST00000524762 WNK4Q96J92 1243 aa23.26■■□□□ 1.31
UBXN1-204ENST00000524762 IDI2Q9BXS1 227 aa23.26■■□□□ 1.31
UBXN1-204ENST00000524762 RAI14Q9P0K7 980 aa23.26■■□□□ 1.31
UBXN1-204ENST00000524762 ZAP70P43403 619 aa23.25■■□□□ 1.31
UBXN1-204ENST00000524762 GSTO1P78417 241 aa23.25■■□□□ 1.31
UBXN1-204ENST00000524762 TCP10Q12799 353 aa23.25■■□□□ 1.31
UBXN1-204ENST00000524762 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.25■■□□□ 1.31
UBXN1-204ENST00000524762 RNF186Q9NXI6 227 aa23.25■■□□□ 1.31
UBXN1-204ENST00000524762 LRP2BPQ9P2M1 347 aa23.25■■□□□ 1.31
UBXN1-204ENST00000524762 AK9Q5TCS8 1911 aa23.24■■□□□ 1.31
UBXN1-204ENST00000524762 APBB1O00213 710 aa23.24■■□□□ 1.31
UBXN1-204ENST00000524762 ZBTB48P10074 688 aaPredicted RBP23.24■■□□□ 1.31
UBXN1-204ENST00000524762 RHBDL3P58872 404 aa23.24■■□□□ 1.31
UBXN1-204ENST00000524762 HOOK2Q96ED9 719 aa23.24■■□□□ 1.31
UBXN1-204ENST00000524762 WDHD1O75717 1129 aaPredicted RBP23.23■■□□□ 1.31
UBXN1-204ENST00000524762 LDHCP07864 332 aa23.23■■□□□ 1.31
UBXN1-204ENST00000524762 GJA5P36382 358 aa23.23■■□□□ 1.31
UBXN1-204ENST00000524762 TM4SF4P48230 202 aa23.23■■□□□ 1.31
UBXN1-204ENST00000524762 RGS3P49796 1198 aa23.23■■□□□ 1.31
UBXN1-204ENST00000524762 ZFPM1Q8IX07 1006 aa23.23■■□□□ 1.31
UBXN1-204ENST00000524762 CLASRPQ8N2M8 674 aaKnown RBP23.23■■□□□ 1.31
UBXN1-204ENST00000524762 PIH1D3Q9NQM4 214 aaKnown RBP23.23■■□□□ 1.31
UBXN1-204ENST00000524762 CDK5RAP2Q96SN8 1893 aa23.22■■□□□ 1.31
UBXN1-204ENST00000524762 ENTPD3O75355 529 aa23.22■■□□□ 1.31
UBXN1-204ENST00000524762 MAP3K9P80192 1104 aa23.22■■□□□ 1.31
UBXN1-204ENST00000524762 VGLL4Q14135 290 aa23.22■■□□□ 1.31
UBXN1-204ENST00000524762 DDX4Q9NQI0 724 aaKnown RBP23.22■■□□□ 1.31
UBXN1-204ENST00000524762 ATRNL1Q5VV63 1379 aa23.22■■□□□ 1.31
UBXN1-204ENST00000524762 IGSF3O75054 1194 aa23.21■■□□□ 1.31
UBXN1-204ENST00000524762 TRPA1O75762 1119 aa23.21■■□□□ 1.31
UBXN1-204ENST00000524762 SREBF2Q12772 1141 aa23.21■■□□□ 1.31
UBXN1-204ENST00000524762 DCAF15Q66K64 600 aa23.21■■□□□ 1.31
UBXN1-204ENST00000524762 TNS4Q8IZW8 715 aa23.21■■□□□ 1.31
UBXN1-204ENST00000524762 ELP3Q9H9T3 547 aa23.21■■□□□ 1.31
UBXN1-204ENST00000524762 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.21■■□□□ 1.31
UBXN1-204ENST00000524762 FOCADQ5VW36 1801 aa23.21■■□□□ 1.31
UBXN1-204ENST00000524762 MAP4K4O95819 1239 aaPredicted RBP23.2■■□□□ 1.3
UBXN1-204ENST00000524762 NAA16Q6N069 864 aaPredicted RBP23.2■■□□□ 1.3
UBXN1-204ENST00000524762 SH3BP5LQ7L8J4 393 aa23.2■■□□□ 1.3
UBXN1-204ENST00000524762 WRNIP1Q96S55 665 aa23.2■■□□□ 1.3
UBXN1-204ENST00000524762 NDUFB9Q9Y6M9 179 aa23.2■■□□□ 1.3
UBXN1-204ENST00000524762 MANSC4A6NHS7 340 aaPredicted RBP23.19■■□□□ 1.3
UBXN1-204ENST00000524762 NPM3O75607 178 aaKnown RBP23.19■■□□□ 1.3
UBXN1-204ENST00000524762 MIGA2Q7L4E1 593 aa23.19■■□□□ 1.3
UBXN1-204ENST00000524762 ADGRA1Q86SQ6 560 aa23.19■■□□□ 1.3
UBXN1-204ENST00000524762 OPTNQ96CV9 577 aa23.19■■□□□ 1.3
UBXN1-204ENST00000524762 ZNF341Q9BYN7 854 aa23.19■■□□□ 1.3
UBXN1-204ENST00000524762 CSADQ9Y600 493 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms