RNA–Protein interactions for RNA: ENST00000524563.1

NUP98-213, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-213ENST00000524563 FAM205AQ6ZU69 1335 aa8.11□□□□□ -1.11
NUP98-213ENST00000524563 IRS2Q9Y4H2 1338 aa8.11□□□□□ -1.11
NUP98-213ENST00000524563 PHIPQ8WWQ0 1821 aa8.11□□□□□ -1.11
NUP98-213ENST00000524563 POTEFA5A3E0 1075 aa8.11□□□□□ -1.11
NUP98-213ENST00000524563 UNCXA6NJT0 531 aa8.11□□□□□ -1.11
NUP98-213ENST00000524563 GJA5P36382 358 aa8.11□□□□□ -1.11
NUP98-213ENST00000524563 RFX5P48382 616 aaPredicted RBP8.11□□□□□ -1.11
NUP98-213ENST00000524563 VGLL4Q14135 290 aa8.11□□□□□ -1.11
NUP98-213ENST00000524563 DCAF15Q66K64 600 aa8.11□□□□□ -1.11
NUP98-213ENST00000524563 NBPF11Q86T75 865 aa8.11□□□□□ -1.11
NUP98-213ENST00000524563 ITPRIPQ8IWB1 547 aa8.11□□□□□ -1.11
NUP98-213ENST00000524563 ANP32EQ9BTT0 268 aa8.11□□□□□ -1.11
NUP98-213ENST00000524563 PUS3Q9BZE2 481 aaKnown RBP8.11□□□□□ -1.11
NUP98-213ENST00000524563 PPP4R2Q9NY27 417 aa8.11□□□□□ -1.11
NUP98-213ENST00000524563 PTPN22Q9Y2R2 807 aa8.11□□□□□ -1.11
NUP98-213ENST00000524563 RBM19Q9Y4C8 960 aaKnown RBP8.11□□□□□ -1.11
NUP98-213ENST00000524563 USP2O75604 605 aaPredicted RBP8.1□□□□□ -1.11
NUP98-213ENST00000524563 GNAI3P08754 354 aa8.1□□□□□ -1.11
NUP98-213ENST00000524563 IFIT1P09914 478 aaKnown RBP8.1□□□□□ -1.11
NUP98-213ENST00000524563 SLC5A1P13866 664 aa8.1□□□□□ -1.11
NUP98-213ENST00000524563 CACNB3P54284 484 aa8.1□□□□□ -1.11
NUP98-213ENST00000524563 LRRC24Q50LG9 513 aa8.1□□□□□ -1.11
NUP98-213ENST00000524563 C20orf194Q5TEA3 1177 aa8.1□□□□□ -1.11
NUP98-213ENST00000524563 C1orf115Q9H7X2 142 aa8.1□□□□□ -1.11
NUP98-213ENST00000524563 PTCH2Q9Y6C5 1203 aa8.1□□□□□ -1.11
NUP98-213ENST00000524563 RPAP1Q9BWH6 1393 aaPredicted RBP8.1□□□□□ -1.11
NUP98-213ENST00000524563 HTTP42858 3142 aa8.09□□□□□ -1.11
NUP98-213ENST00000524563 ALPK3Q96L96 1907 aa8.09□□□□□ -1.11
NUP98-213ENST00000524563 FOCADQ5VW36 1801 aa8.09□□□□□ -1.11
NUP98-213ENST00000524563 ZBTB7BO15156 539 aaPredicted RBP8.09□□□□□ -1.11
NUP98-213ENST00000524563 GNAI2P04899 355 aa8.09□□□□□ -1.11
NUP98-213ENST00000524563 CETPP11597 493 aa8.09□□□□□ -1.11
NUP98-213ENST00000524563 MAP3K9P80192 1104 aa8.09□□□□□ -1.11
NUP98-213ENST00000524563 SNAPC2Q13487 334 aa8.09□□□□□ -1.11
NUP98-213ENST00000524563 MTX1Q13505 466 aa8.09□□□□□ -1.11
NUP98-213ENST00000524563 PUM3Q15397 648 aaKnown RBP8.09□□□□□ -1.11
NUP98-213ENST00000524563 CDAN1Q8IWY9 1227 aa8.09□□□□□ -1.11
NUP98-213ENST00000524563 VGLL2Q8N8G2 317 aa8.09□□□□□ -1.11
NUP98-213ENST00000524563 TDRD7Q8NHU6 1098 aaKnown RBP8.09□□□□□ -1.11
NUP98-213ENST00000524563 BRI3BPQ8WY22 251 aa8.09□□□□□ -1.11
NUP98-213ENST00000524563 PA2G4Q9UQ80 394 aaKnown RBP8.09□□□□□ -1.11
NUP98-213ENST00000524563 RIPOR2Q9Y4F9 1068 aa8.09□□□□□ -1.11
NUP98-213ENST00000524563 LOC285556D6RIA3 1793 aa8.09□□□□□ -1.11
NUP98-213ENST00000524563 MYH1P12882 1939 aa8.09□□□□□ -1.11
NUP98-213ENST00000524563 CENPFP49454 3210 aa8.08□□□□□ -1.12
NUP98-213ENST00000524563 PNMA6EA0A0J9YXQ4 647 aa8.08□□□□□ -1.12
NUP98-213ENST00000524563 EYA2O00167 538 aa8.08□□□□□ -1.12
NUP98-213ENST00000524563 SRGAP3O43295 1099 aa8.08□□□□□ -1.12
NUP98-213ENST00000524563 MVPQ14764 893 aaKnown RBP8.08□□□□□ -1.12
NUP98-213ENST00000524563 ATG9AQ7Z3C6 839 aa8.08□□□□□ -1.12
NUP98-213ENST00000524563 ERO1BQ86YB8 467 aa8.08□□□□□ -1.12
NUP98-213ENST00000524563 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.08□□□□□ -1.12
NUP98-213ENST00000524563 ARMC5Q96C12 935 aa8.08□□□□□ -1.12
NUP98-213ENST00000524563 FAM84BQ96KN1 310 aaPredicted RBP8.08□□□□□ -1.12
NUP98-213ENST00000524563 ZNF341Q9BYN7 854 aa8.08□□□□□ -1.12
NUP98-213ENST00000524563 SIL1Q9H173 461 aa8.08□□□□□ -1.12
NUP98-213ENST00000524563 COPRSQ9NQ92 184 aa8.08□□□□□ -1.12
NUP98-213ENST00000524563 BIN2Q9UBW5 565 aaPredicted RBP8.08□□□□□ -1.12
NUP98-213ENST00000524563 COG6Q9Y2V7 657 aa8.08□□□□□ -1.12
NUP98-213ENST00000524563 SPDYE5A6NIY4 337 aa8.07□□□□□ -1.12
NUP98-213ENST00000524563 MS4A1P11836 297 aa8.07□□□□□ -1.12
NUP98-213ENST00000524563 EN2P19622 333 aaPredicted RBP8.07□□□□□ -1.12
NUP98-213ENST00000524563 RRP1P56182 461 aaKnown RBP8.07□□□□□ -1.12
NUP98-213ENST00000524563 TCP10Q12799 353 aa8.07□□□□□ -1.12
NUP98-213ENST00000524563 PPIL2Q13356 520 aa8.07□□□□□ -1.12
NUP98-213ENST00000524563 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.07□□□□□ -1.12
NUP98-213ENST00000524563 FAM43AQ8N2R8 423 aa8.07□□□□□ -1.12
NUP98-213ENST00000524563 RAET1EQ8TD07 263 aa8.07□□□□□ -1.12
NUP98-213ENST00000524563 ZNF333Q96JL9 665 aa8.07□□□□□ -1.12
NUP98-213ENST00000524563 GNL3LQ9NVN8 582 aaKnown RBP8.07□□□□□ -1.12
NUP98-213ENST00000524563 RNF216Q9NWF9 866 aaPredicted RBP8.07□□□□□ -1.12
NUP98-213ENST00000524563 HDAC5Q9UQL6 1122 aa8.07□□□□□ -1.12
NUP98-213ENST00000524563 SNCAIPQ9Y6H5 919 aa8.07□□□□□ -1.12
NUP98-213ENST00000524563 FRMPD3Q5JV73 1810 aa8.07□□□□□ -1.12
NUP98-213ENST00000524563 MYH7P12883 1935 aa8.07□□□□□ -1.12
NUP98-213ENST00000524563 TESPA1A2RU30 521 aaPredicted RBP8.06□□□□□ -1.12
NUP98-213ENST00000524563 CIAO1O76071 339 aa8.06□□□□□ -1.12
NUP98-213ENST00000524563 PDE8BO95263 885 aa8.06□□□□□ -1.12
NUP98-213ENST00000524563 BCAMP50895 628 aa8.06□□□□□ -1.12
NUP98-213ENST00000524563 HDLBPQ00341 1268 aaKnown RBP8.06□□□□□ -1.12
NUP98-213ENST00000524563 POLA2Q14181 598 aa8.06□□□□□ -1.12
NUP98-213ENST00000524563 PDE3AQ14432 1141 aa8.06□□□□□ -1.12
NUP98-213ENST00000524563 HABP4Q5JVS0 413 aaKnown RBP8.06□□□□□ -1.12
NUP98-213ENST00000524563 DZIP1Q86YF9 867 aaKnown RBP8.06□□□□□ -1.12
NUP98-213ENST00000524563 ZSCAN29Q8IWY8 852 aaPredicted RBP8.06□□□□□ -1.12
NUP98-213ENST00000524563 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.06□□□□□ -1.12
NUP98-213ENST00000524563 WDR66Q8TBY9 1149 aa8.06□□□□□ -1.12
NUP98-213ENST00000524563 SH3TC2Q8TF17 1288 aa8.06□□□□□ -1.12
NUP98-213ENST00000524563 ZKSCAN4Q969J2 545 aaPredicted RBP8.06□□□□□ -1.12
NUP98-213ENST00000524563 MS4A4AQ96JQ5 239 aa8.06□□□□□ -1.12
NUP98-213ENST00000524563 ZDHHC15Q96MV8 337 aa8.06□□□□□ -1.12
NUP98-213ENST00000524563 PARK7Q99497 189 aaKnown RBP8.06□□□□□ -1.12
NUP98-213ENST00000524563 PTPN18Q99952 460 aa8.06□□□□□ -1.12
NUP98-213ENST00000524563 DDX19BQ9UMR2 479 aa8.06□□□□□ -1.12
NUP98-213ENST00000524563 SUGT1Q9Y2Z0 365 aa8.06□□□□□ -1.12
NUP98-213ENST00000524563 NAV1Q8NEY1 1877 aa8.06□□□□□ -1.12
NUP98-213ENST00000524563 MYPNQ86TC9 1320 aa8.05□□□□□ -1.12
NUP98-213ENST00000524563 BTBD19C9JJ37 291 aa8.05□□□□□ -1.12
NUP98-213ENST00000524563 TLR2O60603 784 aa8.05□□□□□ -1.12
NUP98-213ENST00000524563 FMNL1O95466 1100 aaPredicted RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms