RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 LRP2BPQ9P2M1 347 aa14.43□□□□□ -0.1
PVT1-215ENST00000522963 ECM29Q5VYK3 1845 aa14.43□□□□□ -0.1
PVT1-215ENST00000522963 PITPNM2Q9BZ72 1349 aa14.42□□□□□ -0.1
PVT1-215ENST00000522963 CHGBP05060 677 aa14.42□□□□□ -0.1
PVT1-215ENST00000522963 DIXDC1Q155Q3 683 aa14.42□□□□□ -0.1
PVT1-215ENST00000522963 SPTY2D1Q68D10 685 aaPredicted RBP14.42□□□□□ -0.1
PVT1-215ENST00000522963 DZIP1Q86YF9 867 aaKnown RBP14.42□□□□□ -0.1
PVT1-215ENST00000522963 APOBEC3FQ8IUX4 373 aaKnown RBP14.42□□□□□ -0.1
PVT1-215ENST00000522963 RAI14Q9P0K7 980 aa14.42□□□□□ -0.1
PVT1-215ENST00000522963 ZNF70Q9UC06 446 aaPredicted RBP14.42□□□□□ -0.1
PVT1-215ENST00000522963 SUGT1Q9Y2Z0 365 aa14.42□□□□□ -0.1
PVT1-215ENST00000522963 MYH2Q9UKX2 1941 aa14.41□□□□□ -0.1
PVT1-215ENST00000522963 TCP10L2B9ZVM9 353 aa14.41□□□□□ -0.1
PVT1-215ENST00000522963 MECOMQ03112 1051 aa14.41□□□□□ -0.1
PVT1-215ENST00000522963 MAP3K12Q12852 859 aa14.41□□□□□ -0.1
PVT1-215ENST00000522963 PRKG1Q13976 671 aa14.41□□□□□ -0.1
PVT1-215ENST00000522963 TTLL12Q14166 644 aaPredicted RBP14.41□□□□□ -0.1
PVT1-215ENST00000522963 SLFNL1Q499Z3 407 aa14.41□□□□□ -0.1
PVT1-215ENST00000522963 ZNF384Q8TF68 577 aa14.41□□□□□ -0.1
PVT1-215ENST00000522963 NSUN4Q96CB9 384 aaKnown RBP14.41□□□□□ -0.1
PVT1-215ENST00000522963 GBA2Q9HCG7 927 aaPredicted RBP14.41□□□□□ -0.1
PVT1-215ENST00000522963 PDE6AP16499 860 aa14.4□□□□□ -0.1
PVT1-215ENST00000522963 ADD2P35612 726 aa14.4□□□□□ -0.1
PVT1-215ENST00000522963 CACNB3P54284 484 aa14.4□□□□□ -0.1
PVT1-215ENST00000522963 HDLBPQ00341 1268 aaKnown RBP14.4□□□□□ -0.1
PVT1-215ENST00000522963 DEFB115Q30KQ5 88 aa14.4□□□□□ -0.1
PVT1-215ENST00000522963 SLC9C2Q5TAH2 1124 aa14.4□□□□□ -0.1
PVT1-215ENST00000522963 DNAJC5GQ8N7S2 189 aa14.4□□□□□ -0.1
PVT1-215ENST00000522963 MAGEB6Q8N7X4 407 aa14.4□□□□□ -0.1
PVT1-215ENST00000522963 C2orf69Q8N8R5 385 aa14.4□□□□□ -0.1
PVT1-215ENST00000522963 KLRG1Q96E93 195 aa14.4□□□□□ -0.1
PVT1-215ENST00000522963 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.4□□□□□ -0.1
PVT1-215ENST00000522963 TMOD2Q9NZR1 351 aa14.4□□□□□ -0.1
PVT1-215ENST00000522963 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.4□□□□□ -0.1
PVT1-215ENST00000522963 AK9Q5TCS8 1911 aa14.39□□□□□ -0.11
PVT1-215ENST00000522963 RFX7Q2KHR2 1363 aa14.39□□□□□ -0.11
PVT1-215ENST00000522963 TCRBV5S4A2TA0A5A2 114 aa14.39□□□□□ -0.11
PVT1-215ENST00000522963 RNF113AO15541 343 aaKnown RBP14.39□□□□□ -0.11
PVT1-215ENST00000522963 IGSF3O75054 1194 aa14.39□□□□□ -0.11
PVT1-215ENST00000522963 NF2P35240 595 aa14.39□□□□□ -0.11
PVT1-215ENST00000522963 SPDYE2Q495Y8 402 aa14.39□□□□□ -0.11
PVT1-215ENST00000522963 NAA16Q6N069 864 aaPredicted RBP14.39□□□□□ -0.11
PVT1-215ENST00000522963 HHIPL2Q6UWX4 724 aa14.39□□□□□ -0.11
PVT1-215ENST00000522963 ZDHHC15Q96MV8 337 aa14.39□□□□□ -0.11
PVT1-215ENST00000522963 DEFB129Q9H1M3 183 aa14.39□□□□□ -0.11
PVT1-215ENST00000522963 DAGLAQ9Y4D2 1042 aa14.39□□□□□ -0.11
PVT1-215ENST00000522963 TLL2Q9Y6L7 1015 aa14.39□□□□□ -0.11
PVT1-215ENST00000522963 ZNF532Q9HCE3 1301 aa14.39□□□□□ -0.11
PVT1-215ENST00000522963 MYO5AQ9Y4I1 1855 aaKnown RBP14.38□□□□□ -0.11
PVT1-215ENST00000522963 ZFYP08048 801 aaPredicted RBP14.38□□□□□ -0.11
PVT1-215ENST00000522963 CYP7A1P22680 504 aa14.38□□□□□ -0.11
PVT1-215ENST00000522963 CHMLP26374 656 aa14.38□□□□□ -0.11
PVT1-215ENST00000522963 HUNKP57058 714 aa14.38□□□□□ -0.11
PVT1-215ENST00000522963 UBE3CQ15386 1083 aa14.38□□□□□ -0.11
PVT1-215ENST00000522963 LRRFIP1Q32MZ4 808 aaKnown RBP14.38□□□□□ -0.11
PVT1-215ENST00000522963 ZSCAN25Q6NSZ9 544 aa14.38□□□□□ -0.11
PVT1-215ENST00000522963 APOBEC3HQ6NTF7 200 aaKnown RBP14.38□□□□□ -0.11
PVT1-215ENST00000522963 MOB2Q70IA6 237 aa14.38□□□□□ -0.11
PVT1-215ENST00000522963 TICAM2Q86XR7 235 aa14.38□□□□□ -0.11
PVT1-215ENST00000522963 CNTNAP1P78357 1384 aa14.37□□□□□ -0.11
PVT1-215ENST00000522963 CDC45O75419 566 aa14.37□□□□□ -0.11
PVT1-215ENST00000522963 TNNI2P48788 182 aa14.37□□□□□ -0.11
PVT1-215ENST00000522963 VEGFBP49765 207 aa14.37□□□□□ -0.11
PVT1-215ENST00000522963 NMIQ13287 307 aaPredicted RBP14.37□□□□□ -0.11
PVT1-215ENST00000522963 TNFAIP1Q13829 316 aa14.37□□□□□ -0.11
PVT1-215ENST00000522963 RASA3Q14644 834 aa14.37□□□□□ -0.11
PVT1-215ENST00000522963 ZMYM1Q5SVZ6 1142 aa14.37□□□□□ -0.11
PVT1-215ENST00000522963 CYP4F22Q6NT55 531 aa14.37□□□□□ -0.11
PVT1-215ENST00000522963 ADGRA1Q86SQ6 560 aa14.37□□□□□ -0.11
PVT1-215ENST00000522963 SAPCD2Q86UD0 394 aa14.37□□□□□ -0.11
PVT1-215ENST00000522963 SLF2Q8IX21 1173 aa14.37□□□□□ -0.11
PVT1-215ENST00000522963 OSBP2Q969R2 916 aa14.37□□□□□ -0.11
PVT1-215ENST00000522963 FAM227BQ96M60 508 aa14.37□□□□□ -0.11
PVT1-215ENST00000522963 MRIQ9BWK5 157 aa14.37□□□□□ -0.11
PVT1-215ENST00000522963 DIAPH3Q9NSV4 1193 aa14.37□□□□□ -0.11
PVT1-215ENST00000522963 USP40Q9NVE5 1235 aa14.37□□□□□ -0.11
PVT1-215ENST00000522963 A0A0D9SFI3 127 aa14.36□□□□□ -0.11
PVT1-215ENST00000522963 HIP1O00291 1037 aa14.36□□□□□ -0.11
PVT1-215ENST00000522963 GSTO1P78417 241 aa14.36□□□□□ -0.11
PVT1-215ENST00000522963 TMED8Q6PL24 325 aaPredicted RBP14.36□□□□□ -0.11
PVT1-215ENST00000522963 APPBP2Q92624 585 aa14.36□□□□□ -0.11
PVT1-215ENST00000522963 FAM163AQ96GL9 167 aaPredicted RBP14.36□□□□□ -0.11
PVT1-215ENST00000522963 SEC62Q99442 399 aaKnown RBP14.36□□□□□ -0.11
PVT1-215ENST00000522963 TMEM39BQ9GZU3 492 aa14.36□□□□□ -0.11
PVT1-215ENST00000522963 FZD1Q9UP38 647 aa14.36□□□□□ -0.11
PVT1-215ENST00000522963 MROH7-TTC4A0A0A0MT08 1334 aa14.36□□□□□ -0.11
PVT1-215ENST00000522963 GAKO14976 1311 aa14.36□□□□□ -0.11
PVT1-215ENST00000522963 RASSF10A6NK89 507 aa14.35□□□□□ -0.11
PVT1-215ENST00000522963 UBE2Q2LH0YL09 131 aa14.35□□□□□ -0.11
PVT1-215ENST00000522963 M0R2C6 588 aa14.35□□□□□ -0.11
PVT1-215ENST00000522963 LDHCP07864 332 aa14.35□□□□□ -0.11
PVT1-215ENST00000522963 BTDP43251 543 aa14.35□□□□□ -0.11
PVT1-215ENST00000522963 TCP10Q12799 353 aa14.35□□□□□ -0.11
PVT1-215ENST00000522963 NBPF12Q5TAG4 269 aaPredicted RBP14.35□□□□□ -0.11
PVT1-215ENST00000522963 CDC42EP5Q6NZY7 148 aa14.35□□□□□ -0.11
PVT1-215ENST00000522963 CWC27Q6UX04 472 aaKnown RBP14.35□□□□□ -0.11
PVT1-215ENST00000522963 MIGA1Q8NAN2 632 aa14.35□□□□□ -0.11
PVT1-215ENST00000522963 CAPNS2Q96L46 248 aa14.35□□□□□ -0.11
PVT1-215ENST00000522963 PUS7LQ9H0K6 701 aaKnown RBP14.35□□□□□ -0.11
PVT1-215ENST00000522963 IL25Q9H293 177 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms