RNA–Protein interactions for RNA: ENST00000521941.1

CTNNA1-231, Transcript of catenin alpha 1, human

TSL 3

Gene CTNNA1, Length 224 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-231	ENST00000521941	MECOM	Q03112	1051 aa		10.23	□□□□□ -0.77
CTNNA1-231	ENST00000521941	TCP10	Q12799	353 aa		10.23	□□□□□ -0.77
CTNNA1-231	ENST00000521941	MKRN3	Q13064	507 aa	Known RBP	10.23	□□□□□ -0.77
CTNNA1-231	ENST00000521941	ARMC9	Q7Z3E5	817 aa		10.23	□□□□□ -0.77
CTNNA1-231	ENST00000521941	LRRCC1	Q9C099	1032 aa		10.23	□□□□□ -0.77
CTNNA1-231	ENST00000521941	USP40	Q9NVE5	1235 aa		10.23	□□□□□ -0.77
CTNNA1-231	ENST00000521941	PCDHB15	Q9Y5E8	787 aa		10.23	□□□□□ -0.77
CTNNA1-231	ENST00000521941	PPP2R3B	Q9Y5P8	575 aa		10.23	□□□□□ -0.77
CTNNA1-231	ENST00000521941	MROH7-TTC4	A0A0A0MT08	1334 aa		10.23	□□□□□ -0.77
CTNNA1-231	ENST00000521941	DOCK2	Q92608	1830 aa		10.23	□□□□□ -0.77
CTNNA1-231	ENST00000521941	CYP2E1	P05181	493 aa	Predicted RBP	10.22	□□□□□ -0.77
CTNNA1-231	ENST00000521941	CDC42EP5	Q6NZY7	148 aa		10.22	□□□□□ -0.77
CTNNA1-231	ENST00000521941	SLF2	Q8IX21	1173 aa		10.22	□□□□□ -0.77
CTNNA1-231	ENST00000521941	DNAJC2	Q99543	621 aa	Known RBP	10.22	□□□□□ -0.77
CTNNA1-231	ENST00000521941	PIH1D3	Q9NQM4	214 aa	Known RBP	10.22	□□□□□ -0.77
CTNNA1-231	ENST00000521941	PPP1R12B	O60237	982 aa	Predicted RBP	10.21	□□□□□ -0.77
CTNNA1-231	ENST00000521941	IDH1	O75874	414 aa	Known RBP	10.21	□□□□□ -0.77
CTNNA1-231	ENST00000521941	FKBP1B	P68106	108 aa		10.21	□□□□□ -0.77
CTNNA1-231	ENST00000521941	GSTO1	P78417	241 aa		10.21	□□□□□ -0.77
CTNNA1-231	ENST00000521941	NFIA	Q12857	509 aa		10.21	□□□□□ -0.77
CTNNA1-231	ENST00000521941	PICALM	Q13492	652 aa		10.21	□□□□□ -0.77
CTNNA1-231	ENST00000521941	SUPT20HL1	Q3ZLR7	823 aa		10.21	□□□□□ -0.77
CTNNA1-231	ENST00000521941	NAA16	Q6N069	864 aa	Predicted RBP	10.21	□□□□□ -0.77
CTNNA1-231	ENST00000521941	RASAL3	Q86YV0	1011 aa		10.21	□□□□□ -0.77
CTNNA1-231	ENST00000521941	EXOC6	Q8TAG9	804 aa		10.21	□□□□□ -0.77
CTNNA1-231	ENST00000521941	ZNF384	Q8TF68	577 aa		10.21	□□□□□ -0.77
CTNNA1-231	ENST00000521941	AIDA	Q96BJ3	306 aa		10.21	□□□□□ -0.77
CTNNA1-231	ENST00000521941	NSUN4	Q96CB9	384 aa	Known RBP	10.21	□□□□□ -0.77
CTNNA1-231	ENST00000521941	HHIPL1	Q96JK4	782 aa		10.21	□□□□□ -0.77
CTNNA1-231	ENST00000521941	ZIC5	Q96T25	663 aa		10.21	□□□□□ -0.77
CTNNA1-231	ENST00000521941	NOL10	Q9BSC4	688 aa	Known RBP	10.21	□□□□□ -0.77
CTNNA1-231	ENST00000521941	MRI	Q9BWK5	157 aa		10.21	□□□□□ -0.77
CTNNA1-231	ENST00000521941	ANTXR1	Q9H6X2	564 aa		10.21	□□□□□ -0.77
CTNNA1-231	ENST00000521941	GAK	O14976	1311 aa		10.21	□□□□□ -0.78
CTNNA1-231	ENST00000521941	ZBTB22	O15209	634 aa		10.2	□□□□□ -0.78
CTNNA1-231	ENST00000521941	PCNT	O95613	3336 aa		10.2	□□□□□ -0.78
CTNNA1-231	ENST00000521941	SLC10A3	P09131	477 aa		10.2	□□□□□ -0.78
CTNNA1-231	ENST00000521941	RGS3	P49796	1198 aa		10.2	□□□□□ -0.78
CTNNA1-231	ENST00000521941	NOG	Q13253	232 aa		10.2	□□□□□ -0.78
CTNNA1-231	ENST00000521941	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	10.2	□□□□□ -0.78
CTNNA1-231	ENST00000521941	CLMN	Q96JQ2	1002 aa		10.2	□□□□□ -0.78
CTNNA1-231	ENST00000521941	ZNF512B	Q96KM6	892 aa	Predicted RBP	10.2	□□□□□ -0.78
CTNNA1-231	ENST00000521941	TEPSIN	Q96N21	525 aa		10.2	□□□□□ -0.78
CTNNA1-231	ENST00000521941	BOLA2	Q9H3K6	86 aa		10.2	□□□□□ -0.78
CTNNA1-231	ENST00000521941	AATF	Q9NY61	560 aa	Known RBP eCLIP	10.2	□□□□□ -0.78
CTNNA1-231	ENST00000521941	TSKS	Q9UJT2	592 aa		10.2	□□□□□ -0.78
CTNNA1-231	ENST00000521941	CDK5RAP2	Q96SN8	1893 aa		10.19	□□□□□ -0.78
CTNNA1-231	ENST00000521941	FAM155A	B1AL88	458 aa	Predicted RBP	10.19	□□□□□ -0.78
CTNNA1-231	ENST00000521941	GOLIM4	O00461	696 aa		10.19	□□□□□ -0.78
CTNNA1-231	ENST00000521941	FOXN1	O15353	648 aa		10.19	□□□□□ -0.78
CTNNA1-231	ENST00000521941	LDHC	P07864	332 aa		10.19	□□□□□ -0.78
CTNNA1-231	ENST00000521941	CYP7A1	P22680	504 aa		10.19	□□□□□ -0.78
CTNNA1-231	ENST00000521941	IREB2	P48200	963 aa	Known RBP	10.19	□□□□□ -0.78
CTNNA1-231	ENST00000521941	KIF23	Q02241	960 aa	Predicted RBP	10.19	□□□□□ -0.78
CTNNA1-231	ENST00000521941	MAP2K1	Q02750	393 aa	Predicted RBP	10.19	□□□□□ -0.78
CTNNA1-231	ENST00000521941	TSHZ3	Q63HK5	1081 aa		10.19	□□□□□ -0.78
CTNNA1-231	ENST00000521941	MIGA2	Q7L4E1	593 aa		10.19	□□□□□ -0.78
CTNNA1-231	ENST00000521941	FAM83A	Q86UY5	434 aa		10.19	□□□□□ -0.78
CTNNA1-231	ENST00000521941	TEX11	Q8IYF3	940 aa		10.19	□□□□□ -0.78
CTNNA1-231	ENST00000521941	CCDC102A	Q96A19	550 aa		10.19	□□□□□ -0.78
CTNNA1-231	ENST00000521941	EDC3	Q96F86	508 aa	Known RBP	10.19	□□□□□ -0.78
CTNNA1-231	ENST00000521941	BEGAIN	Q9BUH8	593 aa		10.19	□□□□□ -0.78
CTNNA1-231	ENST00000521941	DCTPP1	Q9H773	170 aa		10.19	□□□□□ -0.78
CTNNA1-231	ENST00000521941	FAM198A	Q9UFP1	575 aa		10.19	□□□□□ -0.78
CTNNA1-231	ENST00000521941	MYH7	P12883	1935 aa		10.19	□□□□□ -0.78
CTNNA1-231	ENST00000521941	RPAP1	Q9BWH6	1393 aa	Predicted RBP	10.18	□□□□□ -0.78
CTNNA1-231	ENST00000521941	USP2	O75604	605 aa	Predicted RBP	10.18	□□□□□ -0.78
CTNNA1-231	ENST00000521941	FKBP1C	Q5VVH2	108 aa		10.18	□□□□□ -0.78
CTNNA1-231	ENST00000521941	ADGRA1	Q86SQ6	560 aa		10.18	□□□□□ -0.78
CTNNA1-231	ENST00000521941	ZFPM1	Q8IX07	1006 aa		10.18	□□□□□ -0.78
CTNNA1-231	ENST00000521941	MAGEB6	Q8N7X4	407 aa		10.18	□□□□□ -0.78
CTNNA1-231	ENST00000521941	MIGA1	Q8NAN2	632 aa		10.18	□□□□□ -0.78
CTNNA1-231	ENST00000521941	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	10.18	□□□□□ -0.78
CTNNA1-231	ENST00000521941	FAM151A	Q8WW52	585 aa		10.18	□□□□□ -0.78
CTNNA1-231	ENST00000521941	WRNIP1	Q96S55	665 aa		10.18	□□□□□ -0.78
CTNNA1-231	ENST00000521941	ELP3	Q9H9T3	547 aa		10.18	□□□□□ -0.78
CTNNA1-231	ENST00000521941	DDX4	Q9NQI0	724 aa	Known RBP	10.18	□□□□□ -0.78
CTNNA1-231	ENST00000521941	ZBTB47	Q9UFB7	747 aa	Predicted RBP	10.18	□□□□□ -0.78
CTNNA1-231	ENST00000521941	RFX7	Q2KHR2	1363 aa		10.17	□□□□□ -0.78
CTNNA1-231	ENST00000521941	FOCAD	Q5VW36	1801 aa		10.17	□□□□□ -0.78
CTNNA1-231	ENST00000521941	GPR75-ASB3	A0A0A6YYF3	556 aa		10.17	□□□□□ -0.78
CTNNA1-231	ENST00000521941	WDHD1	O75717	1129 aa	Predicted RBP	10.17	□□□□□ -0.78
CTNNA1-231	ENST00000521941	BAG3	O95817	575 aa		10.17	□□□□□ -0.78
CTNNA1-231	ENST00000521941	MAP2K2	P36507	400 aa		10.17	□□□□□ -0.78
CTNNA1-231	ENST00000521941	RHBDL3	P58872	404 aa		10.17	□□□□□ -0.78
CTNNA1-231	ENST00000521941	DYNLL1	P63167	89 aa	Known RBP	10.17	□□□□□ -0.78
CTNNA1-231	ENST00000521941	MAP3K12	Q12852	859 aa		10.17	□□□□□ -0.78
CTNNA1-231	ENST00000521941	SLC4A8	Q2Y0W8	1093 aa		10.17	□□□□□ -0.78
CTNNA1-231	ENST00000521941	DCAF15	Q66K64	600 aa		10.17	□□□□□ -0.78
CTNNA1-231	ENST00000521941	ANKRD13A	Q8IZ07	590 aa		10.17	□□□□□ -0.78
CTNNA1-231	ENST00000521941	SLC10A4	Q96EP9	437 aa		10.17	□□□□□ -0.78
CTNNA1-231	ENST00000521941	FAM163A	Q96GL9	167 aa	Predicted RBP	10.17	□□□□□ -0.78
CTNNA1-231	ENST00000521941	GPATCH3	Q96I76	525 aa		10.17	□□□□□ -0.78
CTNNA1-231	ENST00000521941	CSRNP1	Q96S65	589 aa		10.17	□□□□□ -0.78
CTNNA1-231	ENST00000521941	PAG1	Q9NWQ8	432 aa		10.17	□□□□□ -0.78
CTNNA1-231	ENST00000521941	WBP1L	Q9NX94	342 aa		10.17	□□□□□ -0.78
CTNNA1-231	ENST00000521941	CSAD	Q9Y600	493 aa		10.17	□□□□□ -0.78
CTNNA1-231	ENST00000521941	NAV1	Q8NEY1	1877 aa		10.17	□□□□□ -0.78
CTNNA1-231	ENST00000521941	DDTL	A6NHG4	134 aa	Predicted RBP	10.16	□□□□□ -0.78
CTNNA1-231	ENST00000521941	SLURP2	P0DP57	97 aa		10.16	□□□□□ -0.78

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