RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 CICQ96RK0 1608 aaPredicted RBP5.99□□□□□ -1.45
VPS13B-208ENST00000521037 QRICH2Q9H0J4 1663 aa5.98□□□□□ -1.45
VPS13B-208ENST00000521037 NUP155O75694 1391 aa5.98□□□□□ -1.45
VPS13B-208ENST00000521037 DHX57Q6P158 1386 aaKnown RBP5.98□□□□□ -1.45
VPS13B-208ENST00000521037 USP17L5A8MUK1 530 aa5.98□□□□□ -1.45
VPS13B-208ENST00000521037 ZNF326Q5BKZ1 582 aaKnown RBP5.98□□□□□ -1.45
VPS13B-208ENST00000521037 CCDC102BQ68D86 513 aa5.98□□□□□ -1.45
VPS13B-208ENST00000521037 TMEM132EQ6IEE7 984 aa5.98□□□□□ -1.45
VPS13B-208ENST00000521037 PSAPL1Q6NUJ1 521 aa5.98□□□□□ -1.45
VPS13B-208ENST00000521037 STAG2Q8N3U4 1231 aa5.98□□□□□ -1.45
VPS13B-208ENST00000521037 TPCN2Q8NHX9 752 aa5.98□□□□□ -1.45
VPS13B-208ENST00000521037 PMFBP1Q8TBY8 1022 aa5.98□□□□□ -1.45
VPS13B-208ENST00000521037 ZNF526Q8TF50 670 aaPredicted RBP5.98□□□□□ -1.45
VPS13B-208ENST00000521037 WFDC12Q8WWY7 111 aa5.98□□□□□ -1.45
VPS13B-208ENST00000521037 PRDM11Q9NQV5 511 aa5.98□□□□□ -1.45
VPS13B-208ENST00000521037 DNAJB12Q9NXW2 375 aaKnown RBP5.98□□□□□ -1.45
VPS13B-208ENST00000521037 USP35Q9P2H5 1018 aa5.98□□□□□ -1.45
VPS13B-208ENST00000521037 WWC3Q9ULE0 1092 aa5.98□□□□□ -1.45
VPS13B-208ENST00000521037 QSER1Q2KHR3 1735 aa5.98□□□□□ -1.45
VPS13B-208ENST00000521037 ARHGEF28Q8N1W1 1705 aaKnown RBP5.98□□□□□ -1.45
VPS13B-208ENST00000521037 ANKARQ7Z5J8 1434 aa5.98□□□□□ -1.45
VPS13B-208ENST00000521037 PNPLA7Q6ZV29 1317 aa5.98□□□□□ -1.45
VPS13B-208ENST00000521037 TUBGCP6Q96RT7 1819 aa5.97□□□□□ -1.45
VPS13B-208ENST00000521037 CPDO75976 1380 aa5.97□□□□□ -1.45
VPS13B-208ENST00000521037 ZBTB42B2RXF5 422 aa5.97□□□□□ -1.45
VPS13B-208ENST00000521037 NOS3P29474 1203 aa5.97□□□□□ -1.45
VPS13B-208ENST00000521037 FBXO11Q86XK2 927 aa5.97□□□□□ -1.45
VPS13B-208ENST00000521037 PLEKHM2Q8IWE5 1019 aa5.97□□□□□ -1.45
VPS13B-208ENST00000521037 ALDH16A1Q8IZ83 802 aa5.97□□□□□ -1.45
VPS13B-208ENST00000521037 DTWD1Q8N5C7 304 aa5.97□□□□□ -1.45
VPS13B-208ENST00000521037 ADAMTS19Q8TE59 1207 aa5.97□□□□□ -1.45
VPS13B-208ENST00000521037 UBE2OQ9C0C9 1292 aaKnown RBP5.97□□□□□ -1.45
VPS13B-208ENST00000521037 STK32BQ9NY57 414 aa5.97□□□□□ -1.45
VPS13B-208ENST00000521037 YTHDC2Q9H6S0 1430 aaKnown RBP5.97□□□□□ -1.45
VPS13B-208ENST00000521037 BTBD11A6QL63 1104 aa5.96□□□□□ -1.46
VPS13B-208ENST00000521037 GRIN3BO60391 1043 aa5.96□□□□□ -1.46
VPS13B-208ENST00000521037 TOMM70O94826 608 aa5.96□□□□□ -1.46
VPS13B-208ENST00000521037 PLAURQ03405 335 aa5.96□□□□□ -1.46
VPS13B-208ENST00000521037 MSL1Q68DK7 614 aa5.96□□□□□ -1.46
VPS13B-208ENST00000521037 C2orf49Q9BVC5 232 aaPredicted RBP5.96□□□□□ -1.46
VPS13B-208ENST00000521037 STK26Q9P289 416 aa5.96□□□□□ -1.46
VPS13B-208ENST00000521037 BCS1LQ9Y276 419 aa5.96□□□□□ -1.46
VPS13B-208ENST00000521037 THRAP3Q9Y2W1 955 aaKnown RBP5.96□□□□□ -1.46
VPS13B-208ENST00000521037 WNK3Q9BYP7 1800 aa5.96□□□□□ -1.46
VPS13B-208ENST00000521037 PIK3C2GO75747 1445 aa5.96□□□□□ -1.46
VPS13B-208ENST00000521037 USP19O94966 1318 aa5.96□□□□□ -1.46
VPS13B-208ENST00000521037 COL18A1P39060 1754 aa5.95□□□□□ -1.46
VPS13B-208ENST00000521037 ROCK1Q13464 1354 aa5.95□□□□□ -1.46
VPS13B-208ENST00000521037 TULP4Q9NRJ4 1543 aa5.95□□□□□ -1.46
VPS13B-208ENST00000521037 TOPAZ1Q8N9V7 1692 aa5.95□□□□□ -1.46
VPS13B-208ENST00000521037 RGS9O75916 674 aaPredicted RBP5.95□□□□□ -1.46
VPS13B-208ENST00000521037 HSPA1AP0DMV8 641 aaKnown RBP5.95□□□□□ -1.46
VPS13B-208ENST00000521037 HSPA1BP0DMV9 641 aaKnown RBP5.95□□□□□ -1.46
VPS13B-208ENST00000521037 ZC3H6P61129 1189 aaKnown RBP5.95□□□□□ -1.46
VPS13B-208ENST00000521037 IER5Q5VY09 327 aa5.95□□□□□ -1.46
VPS13B-208ENST00000521037 SPATA31E1Q6ZUB1 1445 aa5.95□□□□□ -1.46
VPS13B-208ENST00000521037 TRIM50Q86XT4 487 aa5.95□□□□□ -1.46
VPS13B-208ENST00000521037 LARGE2Q8N3Y3 721 aa5.95□□□□□ -1.46
VPS13B-208ENST00000521037 MEGF10Q96KG7 1140 aa5.95□□□□□ -1.46
VPS13B-208ENST00000521037 LPIN3Q9BQK8 851 aa5.95□□□□□ -1.46
VPS13B-208ENST00000521037 ZMYND15Q9H091 742 aa5.95□□□□□ -1.46
VPS13B-208ENST00000521037 IGFLR1Q9H665 355 aa5.95□□□□□ -1.46
VPS13B-208ENST00000521037 NMRK2Q9NPI5 230 aa5.95□□□□□ -1.46
VPS13B-208ENST00000521037 RPGRIP1LQ68CZ1 1315 aa5.95□□□□□ -1.46
VPS13B-208ENST00000521037 NHSQ6T4R5 1651 aa5.94□□□□□ -1.46
VPS13B-208ENST00000521037 DEAF1O75398 565 aaPredicted RBP5.94□□□□□ -1.46
VPS13B-208ENST00000521037 MAP3K6O95382 1288 aa5.94□□□□□ -1.46
VPS13B-208ENST00000521037 IREB2P48200 963 aaKnown RBP5.94□□□□□ -1.46
VPS13B-208ENST00000521037 RGS19P49795 217 aa5.94□□□□□ -1.46
VPS13B-208ENST00000521037 CCINQ13939 588 aa5.94□□□□□ -1.46
VPS13B-208ENST00000521037 MCTP1Q6DN14 999 aa5.94□□□□□ -1.46
VPS13B-208ENST00000521037 DZIP1LQ8IYY4 767 aaKnown RBP5.94□□□□□ -1.46
VPS13B-208ENST00000521037 SIX5Q8N196 739 aa5.94□□□□□ -1.46
VPS13B-208ENST00000521037 TSEN2Q8NCE0 465 aaKnown RBP5.94□□□□□ -1.46
VPS13B-208ENST00000521037 TTC9Q92623 222 aa5.94□□□□□ -1.46
VPS13B-208ENST00000521037 UCN2Q96RP3 112 aa5.94□□□□□ -1.46
VPS13B-208ENST00000521037 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.94□□□□□ -1.46
VPS13B-208ENST00000521037 KIAA1551Q9HCM1 1747 aa5.94□□□□□ -1.46
VPS13B-208ENST00000521037 KIAA1210Q9ULL0 1709 aa5.94□□□□□ -1.46
VPS13B-208ENST00000521037 CRB1P82279 1406 aa5.93□□□□□ -1.46
VPS13B-208ENST00000521037 USP17L3A6NCW0 530 aa5.93□□□□□ -1.46
VPS13B-208ENST00000521037 USP17L4A6NCW7 530 aa5.93□□□□□ -1.46
VPS13B-208ENST00000521037 USP17L2Q6R6M4 530 aa5.93□□□□□ -1.46
VPS13B-208ENST00000521037 IGF2-ASQ6U949 168 aa5.93□□□□□ -1.46
VPS13B-208ENST00000521037 PRR23CQ6ZRP0 262 aa5.93□□□□□ -1.46
VPS13B-208ENST00000521037 USP17L1Q7RTZ2 530 aa5.93□□□□□ -1.46
VPS13B-208ENST00000521037 OGFOD1Q8N543 542 aa5.93□□□□□ -1.46
VPS13B-208ENST00000521037 FRRS1LQ9P0K9 344 aa5.93□□□□□ -1.46
VPS13B-208ENST00000521037 ZFATQ9P243 1243 aa5.93□□□□□ -1.46
VPS13B-208ENST00000521037 KIF1BO60333 1816 aa5.92□□□□□ -1.46
VPS13B-208ENST00000521037 TRPM1Q7Z4N2 1603 aa5.92□□□□□ -1.46
VPS13B-208ENST00000521037 PALM3A6NDB9 673 aaPredicted RBP5.92□□□□□ -1.46
VPS13B-208ENST00000521037 DLL1O00548 723 aa5.92□□□□□ -1.46
VPS13B-208ENST00000521037 PPP1R12BO60237 982 aaPredicted RBP5.92□□□□□ -1.46
VPS13B-208ENST00000521037 NFKB1P19838 968 aa5.92□□□□□ -1.46
VPS13B-208ENST00000521037 ATP1A2P50993 1020 aa5.92□□□□□ -1.46
VPS13B-208ENST00000521037 TBC1D8BQ0IIM8 1120 aa5.92□□□□□ -1.46
VPS13B-208ENST00000521037 PERM1Q5SV97 790 aa5.92□□□□□ -1.46
VPS13B-208ENST00000521037 SLC51AQ86UW1 340 aa5.92□□□□□ -1.46
VPS13B-208ENST00000521037 TRPM4Q8TD43 1214 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms