RNA–Protein interactions for RNA: ENST00000520571.1

DENND3-213, Transcript of DENN domain containing 3, humanhuman

TSL 2

Gene DENND3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-213ENST00000520571 CDC42EP5Q6NZY7 148 aa16.88■□□□□ 0.29
DENND3-213ENST00000520571 CDAN1Q8IWY9 1227 aa16.88■□□□□ 0.29
DENND3-213ENST00000520571 MAP2K2P36507 400 aa16.87■□□□□ 0.29
DENND3-213ENST00000520571 MAP2K1Q02750 393 aaPredicted RBP16.87■□□□□ 0.29
DENND3-213ENST00000520571 TCP10Q12799 353 aa16.87■□□□□ 0.29
DENND3-213ENST00000520571 NOGQ13253 232 aa16.87■□□□□ 0.29
DENND3-213ENST00000520571 ZIC5Q96T25 663 aa16.87■□□□□ 0.29
DENND3-213ENST00000520571 BEGAINQ9BUH8 593 aa16.87■□□□□ 0.29
DENND3-213ENST00000520571 AK9Q5TCS8 1911 aa16.87■□□□□ 0.29
DENND3-213ENST00000520571 SMARCA5O60264 1052 aaPredicted RBP16.86■□□□□ 0.29
DENND3-213ENST00000520571 ZAP70P43403 619 aa16.86■□□□□ 0.29
DENND3-213ENST00000520571 GSTO1P78417 241 aa16.86■□□□□ 0.29
DENND3-213ENST00000520571 MKRN3Q13064 507 aaKnown RBP16.86■□□□□ 0.29
DENND3-213ENST00000520571 ZNF512BQ96KM6 892 aaPredicted RBP16.86■□□□□ 0.29
DENND3-213ENST00000520571 PCDHB15Q9Y5E8 787 aa16.86■□□□□ 0.29
DENND3-213ENST00000520571 NDUFB9Q9Y6M9 179 aa16.86■□□□□ 0.29
DENND3-213ENST00000520571 AKAP11Q9UKA4 1901 aa16.86■□□□□ 0.29
DENND3-213ENST00000520571 FAM155AB1AL88 458 aaPredicted RBP16.85■□□□□ 0.29
DENND3-213ENST00000520571 CYP2E1P05181 493 aaPredicted RBP16.85■□□□□ 0.29
DENND3-213ENST00000520571 SLC10A3P09131 477 aa16.85■□□□□ 0.29
DENND3-213ENST00000520571 BTDP43251 543 aa16.85■□□□□ 0.29
DENND3-213ENST00000520571 NFIAQ12857 509 aa16.85■□□□□ 0.29
DENND3-213ENST00000520571 FKBP1CQ5VVH2 108 aa16.85■□□□□ 0.29
DENND3-213ENST00000520571 RASAL3Q86YV0 1011 aa16.85■□□□□ 0.29
DENND3-213ENST00000520571 NSUN4Q96CB9 384 aaKnown RBP16.85■□□□□ 0.29
DENND3-213ENST00000520571 TEPSINQ96N21 525 aa16.85■□□□□ 0.29
DENND3-213ENST00000520571 LRRCC1Q9C099 1032 aa16.85■□□□□ 0.29
DENND3-213ENST00000520571 WBP1LQ9NX94 342 aa16.85■□□□□ 0.29
DENND3-213ENST00000520571 MROH7-TTC4A0A0A0MT08 1334 aa16.85■□□□□ 0.29
DENND3-213ENST00000520571 GAKO14976 1311 aa16.85■□□□□ 0.29
DENND3-213ENST00000520571 SSC5DA1L4H1 1573 aa16.85■□□□□ 0.29
DENND3-213ENST00000520571 LDHCP07864 332 aa16.84■□□□□ 0.29
DENND3-213ENST00000520571 IREB2P48200 963 aaKnown RBP16.84■□□□□ 0.29
DENND3-213ENST00000520571 KIF23Q02241 960 aaPredicted RBP16.84■□□□□ 0.29
DENND3-213ENST00000520571 NAA16Q6N069 864 aaPredicted RBP16.84■□□□□ 0.29
DENND3-213ENST00000520571 FAM83AQ86UY5 434 aa16.84■□□□□ 0.29
DENND3-213ENST00000520571 ZNF384Q8TF68 577 aa16.84■□□□□ 0.29
DENND3-213ENST00000520571 PIH1D3Q9NQM4 214 aaKnown RBP16.84■□□□□ 0.29
DENND3-213ENST00000520571 FOXN1O15353 648 aa16.83■□□□□ 0.28
DENND3-213ENST00000520571 USP2O75604 605 aaPredicted RBP16.83■□□□□ 0.28
DENND3-213ENST00000520571 IDH1O75874 414 aaKnown RBP16.83■□□□□ 0.28
DENND3-213ENST00000520571 LDLRAD1Q5T700 205 aa16.83■□□□□ 0.28
DENND3-213ENST00000520571 FAM151AQ8WW52 585 aa16.83■□□□□ 0.28
DENND3-213ENST00000520571 SLC10A4Q96EP9 437 aa16.83■□□□□ 0.28
DENND3-213ENST00000520571 FAM163AQ96GL9 167 aaPredicted RBP16.83■□□□□ 0.28
DENND3-213ENST00000520571 NOL10Q9BSC4 688 aaKnown RBP16.83■□□□□ 0.28
DENND3-213ENST00000520571 MYO5AQ9Y4I1 1855 aaKnown RBP16.83■□□□□ 0.28
DENND3-213ENST00000520571 SUPT16HQ9Y5B9 1047 aaKnown RBP16.83■□□□□ 0.28
DENND3-213ENST00000520571 GPR75-ASB3A0A0A6YYF3 556 aa16.82■□□□□ 0.28
DENND3-213ENST00000520571 RGS3P49796 1198 aa16.82■□□□□ 0.28
DENND3-213ENST00000520571 PICALMQ13492 652 aa16.82■□□□□ 0.28
DENND3-213ENST00000520571 CLMNQ96JQ2 1002 aa16.82■□□□□ 0.28
DENND3-213ENST00000520571 DCTPP1Q9H773 170 aa16.82■□□□□ 0.28
DENND3-213ENST00000520571 FAM198AQ9UFP1 575 aa16.82■□□□□ 0.28
DENND3-213ENST00000520571 CTCFP49711 727 aaPredicted RBP16.81■□□□□ 0.28
DENND3-213ENST00000520571 MIGA2Q7L4E1 593 aa16.81■□□□□ 0.28
DENND3-213ENST00000520571 ZSCAN29Q8IWY8 852 aaPredicted RBP16.81■□□□□ 0.28
DENND3-213ENST00000520571 ZFPM1Q8IX07 1006 aa16.81■□□□□ 0.28
DENND3-213ENST00000520571 HOOK2Q96ED9 719 aa16.81■□□□□ 0.28
DENND3-213ENST00000520571 DNAJC2Q99543 621 aaKnown RBP16.81■□□□□ 0.28
DENND3-213ENST00000520571 ANTXR1Q9H6X2 564 aa16.81■□□□□ 0.28
DENND3-213ENST00000520571 TSKSQ9UJT2 592 aa16.81■□□□□ 0.28
DENND3-213ENST00000520571 THSD7BQ9C0I4 1608 aa16.81■□□□□ 0.28
DENND3-213ENST00000520571 MAP3K11Q16584 847 aa16.8■□□□□ 0.28
DENND3-213ENST00000520571 ANKRD13AQ8IZ07 590 aa16.8■□□□□ 0.28
DENND3-213ENST00000520571 GOLIM4O00461 696 aa16.79■□□□□ 0.28
DENND3-213ENST00000520571 WDHD1O75717 1129 aaPredicted RBP16.79■□□□□ 0.28
DENND3-213ENST00000520571 BAG3O95817 575 aa16.79■□□□□ 0.28
DENND3-213ENST00000520571 CYP7A1P22680 504 aa16.79■□□□□ 0.28
DENND3-213ENST00000520571 LBX1P52954 281 aa16.79■□□□□ 0.28
DENND3-213ENST00000520571 MAP3K12Q12852 859 aa16.79■□□□□ 0.28
DENND3-213ENST00000520571 DCAF15Q66K64 600 aa16.79■□□□□ 0.28
DENND3-213ENST00000520571 MAGEB6Q8N7X4 407 aa16.79■□□□□ 0.28
DENND3-213ENST00000520571 SH3RF3Q8TEJ3 882 aaPredicted RBP16.79■□□□□ 0.28
DENND3-213ENST00000520571 CSRNP1Q96S65 589 aa16.79■□□□□ 0.28
DENND3-213ENST00000520571 IDI2Q9BXS1 227 aa16.79■□□□□ 0.28
DENND3-213ENST00000520571 BOLA2Q9H3K6 86 aa16.79■□□□□ 0.28
DENND3-213ENST00000520571 ELP3Q9H9T3 547 aa16.79■□□□□ 0.28
DENND3-213ENST00000520571 AATFQ9NY61 560 aaKnown RBP eCLIP16.79■□□□□ 0.28
DENND3-213ENST00000520571 ENTPD3O75355 529 aa16.78■□□□□ 0.28
DENND3-213ENST00000520571 RHBDL3P58872 404 aa16.78■□□□□ 0.28
DENND3-213ENST00000520571 MAP3K9P80192 1104 aa16.78■□□□□ 0.28
DENND3-213ENST00000520571 SPRYD7Q5W111 196 aa16.78■□□□□ 0.28
DENND3-213ENST00000520571 ADGRA1Q86SQ6 560 aa16.78■□□□□ 0.28
DENND3-213ENST00000520571 TEX11Q8IYF3 940 aa16.78■□□□□ 0.28
DENND3-213ENST00000520571 WRNIP1Q96S55 665 aa16.78■□□□□ 0.28
DENND3-213ENST00000520571 CSADQ9Y600 493 aa16.78■□□□□ 0.28
DENND3-213ENST00000520571 MAST2Q6P0Q8 1798 aa16.77■□□□□ 0.28
DENND3-213ENST00000520571 HSPA8P11142 646 aaKnown RBP16.77■□□□□ 0.28
DENND3-213ENST00000520571 VGLL4Q14135 290 aa16.77■□□□□ 0.28
DENND3-213ENST00000520571 TTF1Q15361 905 aaPredicted RBP16.77■□□□□ 0.28
DENND3-213ENST00000520571 EXOC6Q8TAG9 804 aa16.77■□□□□ 0.28
DENND3-213ENST00000520571 WNK4Q96J92 1243 aa16.77■□□□□ 0.28
DENND3-213ENST00000520571 ZNF341Q9BYN7 854 aa16.77■□□□□ 0.28
DENND3-213ENST00000520571 DDX4Q9NQI0 724 aaKnown RBP16.77■□□□□ 0.28
DENND3-213ENST00000520571 ZBTB47Q9UFB7 747 aaPredicted RBP16.77■□□□□ 0.28
DENND3-213ENST00000520571 RPAP1Q9BWH6 1393 aaPredicted RBP16.77■□□□□ 0.27
DENND3-213ENST00000520571 UNCXA6NJT0 531 aa16.76■□□□□ 0.27
DENND3-213ENST00000520571 CA12O43570 354 aa16.76■□□□□ 0.27
DENND3-213ENST00000520571 TRPA1O75762 1119 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms