RNA–Protein interactions for RNA: ENST00000519848.1

PABPC1-213, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 676 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-213ENST00000519848 CNNM1Q9NRU3 951 aa10.93□□□□□ -0.66
PABPC1-213ENST00000519848 CCDC85CA6NKD9 419 aa10.92□□□□□ -0.66
PABPC1-213ENST00000519848 E9PSI1 815 aa10.92□□□□□ -0.66
PABPC1-213ENST00000519848 IGF2BP3O00425 579 aaKnown RBP eCLIP10.92□□□□□ -0.661e-9■■■■■ 34.4
PABPC1-213ENST00000519848 RGS20O76081 388 aa10.92□□□□□ -0.66
PABPC1-213ENST00000519848 BCAMP50895 628 aa10.92□□□□□ -0.66
PABPC1-213ENST00000519848 MFSD14BQ5SR56 506 aa10.92□□□□□ -0.66
PABPC1-213ENST00000519848 SPRYD7Q5W111 196 aa10.92□□□□□ -0.66
PABPC1-213ENST00000519848 ZNF804AQ7Z570 1209 aa10.92□□□□□ -0.66
PABPC1-213ENST00000519848 CCDC102AQ96A19 550 aa10.92□□□□□ -0.66
PABPC1-213ENST00000519848 TDRD3Q9H7E2 651 aaKnown RBP10.92□□□□□ -0.66
PABPC1-213ENST00000519848 SAGE1Q9NXZ1 904 aa10.92□□□□□ -0.66
PABPC1-213ENST00000519848 ANGEL1Q9UNK9 670 aaKnown RBP10.92□□□□□ -0.66
PABPC1-213ENST00000519848 PTPRCP08575 1304 aa10.91□□□□□ -0.66
PABPC1-213ENST00000519848 RIOK3O14730 519 aaKnown RBP10.91□□□□□ -0.66
PABPC1-213ENST00000519848 CA12O43570 354 aa10.91□□□□□ -0.66
PABPC1-213ENST00000519848 SLURP2P0DP57 97 aa10.91□□□□□ -0.66
PABPC1-213ENST00000519848 FKBP1AP62942 108 aaKnown RBP10.91□□□□□ -0.66
PABPC1-213ENST00000519848 FKBP1BP68106 108 aa10.91□□□□□ -0.66
PABPC1-213ENST00000519848 UBE4AQ14139 1066 aa10.91□□□□□ -0.66
PABPC1-213ENST00000519848 DLGAP5Q15398 846 aa10.91□□□□□ -0.66
PABPC1-213ENST00000519848 MAP3K11Q16584 847 aa10.91□□□□□ -0.66
PABPC1-213ENST00000519848 APOBEC3FQ8IUX4 373 aaKnown RBP10.91□□□□□ -0.66
PABPC1-213ENST00000519848 OGFOD1Q8N543 542 aa10.91□□□□□ -0.66
PABPC1-213ENST00000519848 ZNF296Q8WUU4 475 aaPredicted RBP10.91□□□□□ -0.66
PABPC1-213ENST00000519848 MEIS3Q99687 375 aa10.91□□□□□ -0.66
PABPC1-213ENST00000519848 BEGAINQ9BUH8 593 aa10.91□□□□□ -0.66
PABPC1-213ENST00000519848 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.91□□□□□ -0.66
PABPC1-213ENST00000519848 ZNF70Q9UC06 446 aaPredicted RBP10.91□□□□□ -0.66
PABPC1-213ENST00000519848 PA2G4Q9UQ80 394 aaKnown RBP10.91□□□□□ -0.66
PABPC1-213ENST00000519848 USP2O75604 605 aaPredicted RBP10.9□□□□□ -0.66
PABPC1-213ENST00000519848 PSEN2P49810 448 aa10.9□□□□□ -0.66
PABPC1-213ENST00000519848 SOX10P56693 466 aa10.9□□□□□ -0.66
PABPC1-213ENST00000519848 CHAF1AQ13111 956 aaPredicted RBP10.9□□□□□ -0.66
PABPC1-213ENST00000519848 RASA3Q14644 834 aa10.9□□□□□ -0.66
PABPC1-213ENST00000519848 TAF7LQ5H9L4 462 aa10.9□□□□□ -0.66
PABPC1-213ENST00000519848 PTPN18Q99952 460 aa10.9□□□□□ -0.66
PABPC1-213ENST00000519848 TMEM39BQ9GZU3 492 aa10.9□□□□□ -0.66
PABPC1-213ENST00000519848 VEZTQ9HBM0 779 aa10.9□□□□□ -0.66
PABPC1-213ENST00000519848 SMC4Q9NTJ3 1288 aa10.9□□□□□ -0.66
PABPC1-213ENST00000519848 NOB1Q9ULX3 412 aaKnown RBP10.9□□□□□ -0.66
PABPC1-213ENST00000519848 TTF2Q9UNY4 1162 aaKnown RBP10.9□□□□□ -0.66
PABPC1-213ENST00000519848 SIPA1L1O43166 1804 aa10.89□□□□□ -0.67
PABPC1-213ENST00000519848 DOCK2Q92608 1830 aa10.89□□□□□ -0.67
PABPC1-213ENST00000519848 PDE8BO95263 885 aa10.89□□□□□ -0.67
PABPC1-213ENST00000519848 ADORA1P30542 326 aa10.89□□□□□ -0.67
PABPC1-213ENST00000519848 HIBADHP31937 336 aaKnown RBP10.89□□□□□ -0.67
PABPC1-213ENST00000519848 CRKP46108 304 aa10.89□□□□□ -0.67
PABPC1-213ENST00000519848 TM4SF4P48230 202 aa10.89□□□□□ -0.67
PABPC1-213ENST00000519848 RGS19P49795 217 aa10.89□□□□□ -0.67
PABPC1-213ENST00000519848 TTLL12Q14166 644 aaPredicted RBP10.89□□□□□ -0.67
PABPC1-213ENST00000519848 METTL24Q5JXM2 366 aa10.89□□□□□ -0.67
PABPC1-213ENST00000519848 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.89□□□□□ -0.67
PABPC1-213ENST00000519848 DZIP1LQ8IYY4 767 aaKnown RBP10.89□□□□□ -0.67
PABPC1-213ENST00000519848 WNK4Q96J92 1243 aa10.89□□□□□ -0.67
PABPC1-213ENST00000519848 MYO5AQ9Y4I1 1855 aaKnown RBP10.89□□□□□ -0.67
PABPC1-213ENST00000519848 RFX7Q2KHR2 1363 aa10.89□□□□□ -0.67
PABPC1-213ENST00000519848 MROH5Q6ZUA9 1318 aa10.88□□□□□ -0.67
PABPC1-213ENST00000519848 TCP10L2B9ZVM9 353 aa10.88□□□□□ -0.67
PABPC1-213ENST00000519848 RARSP54136 660 aaKnown RBP10.88□□□□□ -0.67
PABPC1-213ENST00000519848 APOBEC3HQ6NTF7 200 aaKnown RBP10.88□□□□□ -0.67
PABPC1-213ENST00000519848 ZNF384Q8TF68 577 aa10.88□□□□□ -0.67
PABPC1-213ENST00000519848 SIL1Q9H173 461 aa10.88□□□□□ -0.67
PABPC1-213ENST00000519848 HDAC9Q9UKV0 1011 aa10.88□□□□□ -0.67
PABPC1-213ENST00000519848 LRRFIP2Q9Y608 721 aaKnown RBP10.88□□□□□ -0.67
PABPC1-213ENST00000519848 PHIPQ8WWQ0 1821 aa10.87□□□□□ -0.67
PABPC1-213ENST00000519848 BRCA2P51587 3418 aa10.87□□□□□ -0.67
PABPC1-213ENST00000519848 EYA2O00167 538 aa10.87□□□□□ -0.67
PABPC1-213ENST00000519848 PRDX5P30044 214 aa10.87□□□□□ -0.67
PABPC1-213ENST00000519848 PHKA1P46020 1223 aa10.87□□□□□ -0.67
PABPC1-213ENST00000519848 DIXDC1Q155Q3 683 aa10.87□□□□□ -0.67
PABPC1-213ENST00000519848 ALDH1L2Q3SY69 923 aa10.87□□□□□ -0.67
PABPC1-213ENST00000519848 CENPFP49454 3210 aa10.87□□□□□ -0.67
PABPC1-213ENST00000519848 ATRNL1Q5VV63 1379 aa10.87□□□□□ -0.67
PABPC1-213ENST00000519848 MYH2Q9UKX2 1941 aa10.86□□□□□ -0.67
PABPC1-213ENST00000519848 RBBP6Q7Z6E9 1792 aaKnown RBP10.86□□□□□ -0.67
PABPC1-213ENST00000519848 GPR25O00155 361 aa10.86□□□□□ -0.67
PABPC1-213ENST00000519848 BCAR3O75815 825 aa10.86□□□□□ -0.67
PABPC1-213ENST00000519848 NFIAQ12857 509 aa10.86□□□□□ -0.67
PABPC1-213ENST00000519848 ZFPM1Q8IX07 1006 aa10.86□□□□□ -0.67
PABPC1-213ENST00000519848 ELP3Q9H9T3 547 aa10.86□□□□□ -0.67
PABPC1-213ENST00000519848 SERPINA10Q9UK55 444 aa10.86□□□□□ -0.67
PABPC1-213ENST00000519848 HPS5Q9UPZ3 1129 aa10.86□□□□□ -0.67
PABPC1-213ENST00000519848 SNCAIPQ9Y6H5 919 aa10.86□□□□□ -0.67
PABPC1-213ENST00000519848 CDK5RAP2Q96SN8 1893 aa10.86□□□□□ -0.67
PABPC1-213ENST00000519848 PTPRFP10586 1907 aa10.86□□□□□ -0.67
PABPC1-213ENST00000519848 MKI67P46013 3256 aaKnown RBP10.85□□□□□ -0.67
PABPC1-213ENST00000519848 TRIM27P14373 513 aa10.85□□□□□ -0.67
PABPC1-213ENST00000519848 RBM5P52756 815 aaKnown RBP eCLIP10.85□□□□□ -0.672e-12■■■■□ 23.8
PABPC1-213ENST00000519848 VGLL4Q14135 290 aa10.85□□□□□ -0.67
PABPC1-213ENST00000519848 PUM3Q15397 648 aaKnown RBP10.85□□□□□ -0.67
PABPC1-213ENST00000519848 PI16Q6UXB8 463 aa10.85□□□□□ -0.67
PABPC1-213ENST00000519848 ARMC9Q7Z3E5 817 aa10.85□□□□□ -0.67
PABPC1-213ENST00000519848 CTU1Q7Z7A3 348 aaKnown RBP10.85□□□□□ -0.67
PABPC1-213ENST00000519848 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.85□□□□□ -0.67
PABPC1-213ENST00000519848 BRI3BPQ8WY22 251 aa10.85□□□□□ -0.67
PABPC1-213ENST00000519848 CFHR5Q9BXR6 569 aa10.85□□□□□ -0.67
PABPC1-213ENST00000519848 DAGLAQ9Y4D2 1042 aa10.85□□□□□ -0.67
PABPC1-213ENST00000519848 PPP2R3BQ9Y5P8 575 aa10.85□□□□□ -0.67
PABPC1-213ENST00000519848 PNMA6EA0A0J9YXQ4 647 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms