RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 PDS5AQ29RF7 1337 aaKnown RBP9.24□□□□□ -0.93
SDCBP-206ENST00000519115 SALL1Q9NSC2 1324 aa9.24□□□□□ -0.93
SDCBP-206ENST00000519115 CNTNAP1P78357 1384 aa9.24□□□□□ -0.93
SDCBP-206ENST00000519115 CACNB3P54284 484 aa9.23□□□□□ -0.93
SDCBP-206ENST00000519115 HDLBPQ00341 1268 aaKnown RBP9.23□□□□□ -0.93
SDCBP-206ENST00000519115 PAXIP1Q6ZW49 1069 aaPredicted RBP9.23□□□□□ -0.93
SDCBP-206ENST00000519115 DZIP1Q86YF9 867 aaKnown RBP9.23□□□□□ -0.93
SDCBP-206ENST00000519115 CLASRPQ8N2M8 674 aaKnown RBP9.23□□□□□ -0.93
SDCBP-206ENST00000519115 ZGPATQ8N5A5 531 aaKnown RBP9.23□□□□□ -0.93
SDCBP-206ENST00000519115 KLRG1Q96E93 195 aa9.23□□□□□ -0.93
SDCBP-206ENST00000519115 GBA2Q9HCG7 927 aaPredicted RBP9.23□□□□□ -0.93
SDCBP-206ENST00000519115 DAGLAQ9Y4D2 1042 aa9.23□□□□□ -0.93
SDCBP-206ENST00000519115 NDUFB9Q9Y6M9 179 aa9.23□□□□□ -0.93
SDCBP-206ENST00000519115 SSC5DA1L4H1 1573 aa9.22□□□□□ -0.93
SDCBP-206ENST00000519115 TCP10L2B9ZVM9 353 aa9.22□□□□□ -0.93
SDCBP-206ENST00000519115 IFIT2P09913 472 aaKnown RBP9.22□□□□□ -0.93
SDCBP-206ENST00000519115 ZAP70P43403 619 aa9.22□□□□□ -0.93
SDCBP-206ENST00000519115 GRM1Q13255 1194 aa9.22□□□□□ -0.93
SDCBP-206ENST00000519115 SPTY2D1Q68D10 685 aaPredicted RBP9.22□□□□□ -0.93
SDCBP-206ENST00000519115 APOBEC3HQ6NTF7 200 aaKnown RBP9.22□□□□□ -0.93
SDCBP-206ENST00000519115 HHIPL2Q6UWX4 724 aa9.22□□□□□ -0.93
SDCBP-206ENST00000519115 ERICH6Q7L0X2 663 aa9.22□□□□□ -0.93
SDCBP-206ENST00000519115 REM2Q8IYK8 340 aaPredicted RBP9.22□□□□□ -0.93
SDCBP-206ENST00000519115 IL27Q8NEV9 243 aa9.22□□□□□ -0.93
SDCBP-206ENST00000519115 ZDHHC15Q96MV8 337 aa9.22□□□□□ -0.93
SDCBP-206ENST00000519115 BACH2Q9BYV9 841 aa9.22□□□□□ -0.93
SDCBP-206ENST00000519115 DEFB129Q9H1M3 183 aa9.22□□□□□ -0.93
SDCBP-206ENST00000519115 RAI14Q9P0K7 980 aa9.22□□□□□ -0.93
SDCBP-206ENST00000519115 TLL2Q9Y6L7 1015 aa9.22□□□□□ -0.93
SDCBP-206ENST00000519115 FOCADQ5VW36 1801 aa9.21□□□□□ -0.93
SDCBP-206ENST00000519115 THSD7BQ9C0I4 1608 aa9.21□□□□□ -0.93
SDCBP-206ENST00000519115 RASSF10A6NK89 507 aa9.21□□□□□ -0.94
SDCBP-206ENST00000519115 CYP2E1P05181 493 aaPredicted RBP9.21□□□□□ -0.94
SDCBP-206ENST00000519115 VEGFBP49765 207 aa9.21□□□□□ -0.94
SDCBP-206ENST00000519115 HUNKP57058 714 aa9.21□□□□□ -0.94
SDCBP-206ENST00000519115 MECOMQ03112 1051 aa9.21□□□□□ -0.94
SDCBP-206ENST00000519115 PRKG1Q13976 671 aa9.21□□□□□ -0.94
SDCBP-206ENST00000519115 TTLL12Q14166 644 aaPredicted RBP9.21□□□□□ -0.94
SDCBP-206ENST00000519115 RASA3Q14644 834 aa9.21□□□□□ -0.94
SDCBP-206ENST00000519115 MOB2Q70IA6 237 aa9.21□□□□□ -0.94
SDCBP-206ENST00000519115 SAPCD2Q86UD0 394 aa9.21□□□□□ -0.94
SDCBP-206ENST00000519115 PLEKHM2Q8IWE5 1019 aa9.21□□□□□ -0.94
SDCBP-206ENST00000519115 CDAN1Q8IWY9 1227 aa9.21□□□□□ -0.94
SDCBP-206ENST00000519115 ZNF384Q8TF68 577 aa9.21□□□□□ -0.94
SDCBP-206ENST00000519115 PIH1D3Q9NQM4 214 aaKnown RBP9.21□□□□□ -0.94
SDCBP-206ENST00000519115 TMOD2Q9NZR1 351 aa9.21□□□□□ -0.94
SDCBP-206ENST00000519115 LRP2BPQ9P2M1 347 aa9.21□□□□□ -0.94
SDCBP-206ENST00000519115 FZD1Q9UP38 647 aa9.21□□□□□ -0.94
SDCBP-206ENST00000519115 TTC41PQ6P2S7 1318 aa9.21□□□□□ -0.94
SDCBP-206ENST00000519115 SALL3Q9BXA9 1300 aa9.21□□□□□ -0.94
SDCBP-206ENST00000519115 EPB41L2O43491 1005 aaKnown RBP9.2□□□□□ -0.94
SDCBP-206ENST00000519115 PDE4AP27815 886 aa9.2□□□□□ -0.94
SDCBP-206ENST00000519115 NF2P35240 595 aa9.2□□□□□ -0.94
SDCBP-206ENST00000519115 TNFAIP1Q13829 316 aa9.2□□□□□ -0.94
SDCBP-206ENST00000519115 DEFB115Q30KQ5 88 aa9.2□□□□□ -0.94
SDCBP-206ENST00000519115 CYP4F22Q6NT55 531 aa9.2□□□□□ -0.94
SDCBP-206ENST00000519115 CDC42EP5Q6NZY7 148 aa9.2□□□□□ -0.94
SDCBP-206ENST00000519115 C2orf69Q8N8R5 385 aa9.2□□□□□ -0.94
SDCBP-206ENST00000519115 SP7Q8TDD2 431 aaPredicted RBP9.2□□□□□ -0.94
SDCBP-206ENST00000519115 NSUN4Q96CB9 384 aaKnown RBP9.2□□□□□ -0.94
SDCBP-206ENST00000519115 ZNF512BQ96KM6 892 aaPredicted RBP9.2□□□□□ -0.94
SDCBP-206ENST00000519115 CAPNS2Q96L46 248 aa9.2□□□□□ -0.94
SDCBP-206ENST00000519115 DNAJC2Q99543 621 aaKnown RBP9.2□□□□□ -0.94
SDCBP-206ENST00000519115 MRIQ9BWK5 157 aa9.2□□□□□ -0.94
SDCBP-206ENST00000519115 LNPKQ9C0E8 428 aa9.2□□□□□ -0.94
SDCBP-206ENST00000519115 TMEM39BQ9GZU3 492 aa9.2□□□□□ -0.94
SDCBP-206ENST00000519115 MROH7-TTC4A0A0A0MT08 1334 aa9.2□□□□□ -0.94
SDCBP-206ENST00000519115 GAKO14976 1311 aa9.2□□□□□ -0.94
SDCBP-206ENST00000519115 MYH1P12882 1939 aa9.19□□□□□ -0.94
SDCBP-206ENST00000519115 UBE2Q2LH0YL09 131 aa9.19□□□□□ -0.94
SDCBP-206ENST00000519115 ERC2O15083 957 aa9.19□□□□□ -0.94
SDCBP-206ENST00000519115 IGSF3O75054 1194 aa9.19□□□□□ -0.94
SDCBP-206ENST00000519115 IDH1O75874 414 aaKnown RBP9.19□□□□□ -0.94
SDCBP-206ENST00000519115 BTDP43251 543 aa9.19□□□□□ -0.94
SDCBP-206ENST00000519115 PDE1AP54750 535 aa9.19□□□□□ -0.94
SDCBP-206ENST00000519115 TCP10Q12799 353 aa9.19□□□□□ -0.94
SDCBP-206ENST00000519115 NFIAQ12857 509 aa9.19□□□□□ -0.94
SDCBP-206ENST00000519115 NBPF12Q5TAG4 269 aaPredicted RBP9.19□□□□□ -0.94
SDCBP-206ENST00000519115 TSHZ3Q63HK5 1081 aa9.19□□□□□ -0.94
SDCBP-206ENST00000519115 EDC3Q96F86 508 aaKnown RBP9.19□□□□□ -0.94
SDCBP-206ENST00000519115 GPATCH3Q96I76 525 aa9.19□□□□□ -0.94
SDCBP-206ENST00000519115 ANTXR1Q9H6X2 564 aa9.19□□□□□ -0.94
SDCBP-206ENST00000519115 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.19□□□□□ -0.94
SDCBP-206ENST00000519115 PPP2R3BQ9Y5P8 575 aa9.19□□□□□ -0.94
SDCBP-206ENST00000519115 GOLIM4O00461 696 aa9.18□□□□□ -0.94
SDCBP-206ENST00000519115 AOC2O75106 756 aa9.18□□□□□ -0.94
SDCBP-206ENST00000519115 GLRX3O76003 335 aaKnown RBP9.18□□□□□ -0.94
SDCBP-206ENST00000519115 MX1P20591 662 aa9.18□□□□□ -0.94
SDCBP-206ENST00000519115 TNNI2P48788 182 aa9.18□□□□□ -0.94
SDCBP-206ENST00000519115 RGS3P49796 1198 aa9.18□□□□□ -0.94
SDCBP-206ENST00000519115 GSTO1P78417 241 aa9.18□□□□□ -0.94
SDCBP-206ENST00000519115 RFX7Q2KHR2 1363 aa9.18□□□□□ -0.94
SDCBP-206ENST00000519115 NAA16Q6N069 864 aaPredicted RBP9.18□□□□□ -0.94
SDCBP-206ENST00000519115 ADGRA1Q86SQ6 560 aa9.18□□□□□ -0.94
SDCBP-206ENST00000519115 SLF2Q8IX21 1173 aa9.18□□□□□ -0.94
SDCBP-206ENST00000519115 NAV1Q8NEY1 1877 aa9.18□□□□□ -0.94
SDCBP-206ENST00000519115 OTUD7AQ8TE49 926 aaPredicted RBP9.18□□□□□ -0.94
SDCBP-206ENST00000519115 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.18□□□□□ -0.94
SDCBP-206ENST00000519115 TEPSINQ96N21 525 aa9.18□□□□□ -0.94
SDCBP-206ENST00000519115 WDR33Q9C0J8 1336 aaKnown RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms