RNA–Protein interactions for RNA: ENST00000519112.5

BRD9-217, Transcript of bromodomain containing 9, humanhuman

TSL 3

Gene BRD9, Length 861 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-217ENST00000519112 PTPN18Q99952 460 aa17.25■□□□□ 0.35
BRD9-217ENST00000519112 C1orf115Q9H7X2 142 aa17.25■□□□□ 0.35
BRD9-217ENST00000519112 AKAP2Q9Y2D5 859 aa17.25■□□□□ 0.35
BRD9-217ENST00000519112 ZBTB7BO15156 539 aaPredicted RBP17.24■□□□□ 0.35
BRD9-217ENST00000519112 INHBEP58166 350 aa17.24■□□□□ 0.35
BRD9-217ENST00000519112 POLA2Q14181 598 aa17.24■□□□□ 0.35
BRD9-217ENST00000519112 NOM1Q5C9Z4 860 aaKnown RBP17.24■□□□□ 0.35
BRD9-217ENST00000519112 CTU1Q7Z7A3 348 aaKnown RBP17.24■□□□□ 0.35
BRD9-217ENST00000519112 NEUROD6Q96NK8 337 aa17.24■□□□□ 0.35
BRD9-217ENST00000519112 TMOD2Q9NZR1 351 aa17.24■□□□□ 0.35
BRD9-217ENST00000519112 PDS5AQ29RF7 1337 aaKnown RBP17.23■□□□□ 0.35
BRD9-217ENST00000519112 HTTP42858 3142 aa17.23■□□□□ 0.35
BRD9-217ENST00000519112 CENPFP49454 3210 aa17.23■□□□□ 0.35
BRD9-217ENST00000519112 TESPA1A2RU30 521 aaPredicted RBP17.23■□□□□ 0.35
BRD9-217ENST00000519112 ATP8B2P98198 1209 aa17.23■□□□□ 0.35
BRD9-217ENST00000519112 SSH3Q8TE77 659 aa17.23■□□□□ 0.35
BRD9-217ENST00000519112 FAM151AQ8WW52 585 aa17.23■□□□□ 0.35
BRD9-217ENST00000519112 MS4A4AQ96JQ5 239 aa17.23■□□□□ 0.35
BRD9-217ENST00000519112 FAM198AQ9UFP1 575 aa17.23■□□□□ 0.35
BRD9-217ENST00000519112 RPAP1Q9BWH6 1393 aaPredicted RBP17.23■□□□□ 0.35
BRD9-217ENST00000519112 ALDH1A1P00352 501 aa17.22■□□□□ 0.35
BRD9-217ENST00000519112 TCP10Q12799 353 aa17.22■□□□□ 0.35
BRD9-217ENST00000519112 G3BP1Q13283 466 aaKnown RBP eCLIP17.22■□□□□ 0.35
BRD9-217ENST00000519112 MVPQ14764 893 aaKnown RBP17.22■□□□□ 0.35
BRD9-217ENST00000519112 PI16Q6UXB8 463 aa17.22■□□□□ 0.35
BRD9-217ENST00000519112 MIGA2Q7L4E1 593 aa17.22■□□□□ 0.35
BRD9-217ENST00000519112 ZFPM1Q8IX07 1006 aa17.22■□□□□ 0.35
BRD9-217ENST00000519112 ZNF384Q8TF68 577 aa17.22■□□□□ 0.35
BRD9-217ENST00000519112 ZKSCAN4Q969J2 545 aaPredicted RBP17.22■□□□□ 0.35
BRD9-217ENST00000519112 USP40Q9NVE5 1235 aa17.22■□□□□ 0.35
BRD9-217ENST00000519112 HMG20BQ9P0W2 317 aa17.22■□□□□ 0.35
BRD9-217ENST00000519112 ABCF2Q9UG63 623 aa17.22■□□□□ 0.35
BRD9-217ENST00000519112 SNCAIPQ9Y6H5 919 aa17.22■□□□□ 0.35
BRD9-217ENST00000519112 GAKO14976 1311 aa17.21■□□□□ 0.35
BRD9-217ENST00000519112 MYO5AQ9Y4I1 1855 aaKnown RBP17.21■□□□□ 0.35
BRD9-217ENST00000519112 ITPRIPQ8IWB1 547 aa17.21■□□□□ 0.35
BRD9-217ENST00000519112 FTSJ3Q8IY81 847 aaKnown RBP17.21■□□□□ 0.35
BRD9-217ENST00000519112 DOCK2Q92608 1830 aa17.2■□□□□ 0.34
BRD9-217ENST00000519112 RGS19P49795 217 aa17.2■□□□□ 0.34
BRD9-217ENST00000519112 ZGPATQ8N5A5 531 aaKnown RBP17.2■□□□□ 0.34
BRD9-217ENST00000519112 BRI3BPQ8WY22 251 aa17.2■□□□□ 0.34
BRD9-217ENST00000519112 WRNIP1Q96S55 665 aa17.2■□□□□ 0.34
BRD9-217ENST00000519112 TNRC18O15417 2968 aaPredicted RBP17.2■□□□□ 0.34
BRD9-217ENST00000519112 RFX7Q2KHR2 1363 aa17.19■□□□□ 0.34
BRD9-217ENST00000519112 SPDYE5A6NIY4 337 aa17.19■□□□□ 0.34
BRD9-217ENST00000519112 FKTNO75072 461 aa17.19■□□□□ 0.34
BRD9-217ENST00000519112 ARID4AP29374 1257 aaPredicted RBP17.19■□□□□ 0.34
BRD9-217ENST00000519112 CRHR2Q13324 411 aa17.19■□□□□ 0.34
BRD9-217ENST00000519112 TBC1D9Q6ZT07 1266 aa17.19■□□□□ 0.34
BRD9-217ENST00000519112 SPATA5Q8NB90 893 aa17.19■□□□□ 0.34
BRD9-217ENST00000519112 PANK1Q8TE04 598 aa17.19■□□□□ 0.34
BRD9-217ENST00000519112 OTUD5Q96G74 571 aa17.19■□□□□ 0.34
BRD9-217ENST00000519112 FAM163AQ96GL9 167 aaPredicted RBP17.19■□□□□ 0.34
BRD9-217ENST00000519112 CSADQ9Y600 493 aa17.19■□□□□ 0.34
BRD9-217ENST00000519112 INPP5BP32019 993 aa17.18■□□□□ 0.34
BRD9-217ENST00000519112 MCAMP43121 646 aa17.18■□□□□ 0.34
BRD9-217ENST00000519112 MECOMQ03112 1051 aa17.18■□□□□ 0.34
BRD9-217ENST00000519112 SH3BP5LQ7L8J4 393 aa17.18■□□□□ 0.34
BRD9-217ENST00000519112 DZIP1Q86YF9 867 aaKnown RBP17.18■□□□□ 0.34
BRD9-217ENST00000519112 IDI2Q9BXS1 227 aa17.18■□□□□ 0.34
BRD9-217ENST00000519112 ZNF341Q9BYN7 854 aa17.18■□□□□ 0.34
BRD9-217ENST00000519112 ZNF112Q9UJU3 913 aa17.18■□□□□ 0.34
BRD9-217ENST00000519112 ATRNL1Q5VV63 1379 aa17.17■□□□□ 0.34
BRD9-217ENST00000519112 CCL15-CCL14A0A0B4J2E2 113 aa17.17■□□□□ 0.34
BRD9-217ENST00000519112 IRF6O14896 467 aa17.17■□□□□ 0.34
BRD9-217ENST00000519112 SURF6O75683 361 aaKnown RBP17.17■□□□□ 0.34
BRD9-217ENST00000519112 WDHD1O75717 1129 aaPredicted RBP17.17■□□□□ 0.34
BRD9-217ENST00000519112 SLURP2P0DP57 97 aa17.17■□□□□ 0.34
BRD9-217ENST00000519112 BTDP43251 543 aa17.17■□□□□ 0.34
BRD9-217ENST00000519112 RGS3P49796 1198 aa17.17■□□□□ 0.34
BRD9-217ENST00000519112 CAP1Q01518 475 aa17.17■□□□□ 0.34
BRD9-217ENST00000519112 CCL15Q16663 113 aa17.17■□□□□ 0.34
BRD9-217ENST00000519112 TNNI3KQ59H18 835 aa17.17■□□□□ 0.34
BRD9-217ENST00000519112 GORABQ5T7V8 394 aa17.17■□□□□ 0.34
BRD9-217ENST00000519112 DCAF15Q66K64 600 aa17.17■□□□□ 0.34
BRD9-217ENST00000519112 ERICH6Q7L0X2 663 aa17.17■□□□□ 0.34
BRD9-217ENST00000519112 NSUN4Q96CB9 384 aaKnown RBP17.17■□□□□ 0.34
BRD9-217ENST00000519112 HOOK2Q96ED9 719 aa17.17■□□□□ 0.34
BRD9-217ENST00000519112 DBNDD2Q9BQY9 259 aa17.17■□□□□ 0.34
BRD9-217ENST00000519112 GPR108Q9NPR9 543 aa17.17■□□□□ 0.34
BRD9-217ENST00000519112 DDX4Q9NQI0 724 aaKnown RBP17.17■□□□□ 0.34
BRD9-217ENST00000519112 HPS5Q9UPZ3 1129 aa17.17■□□□□ 0.34
BRD9-217ENST00000519112 NOP58Q9Y2X3 529 aaKnown RBP17.17■□□□□ 0.34
BRD9-217ENST00000519112 FPGT-TNNI3KV9GXZ4 949 aa17.17■□□□□ 0.34
BRD9-217ENST00000519112 BRCA2P51587 3418 aa17.17■□□□□ 0.34
BRD9-217ENST00000519112 MROH7-TTC4A0A0A0MT08 1334 aa17.17■□□□□ 0.34
BRD9-217ENST00000519112 GPR75-ASB3A0A0A6YYF3 556 aa17.16■□□□□ 0.34
BRD9-217ENST00000519112 GTF2A2P52657 109 aa17.16■□□□□ 0.34
BRD9-217ENST00000519112 RHBDL3P58872 404 aa17.16■□□□□ 0.34
BRD9-217ENST00000519112 SPTY2D1Q68D10 685 aaPredicted RBP17.16■□□□□ 0.34
BRD9-217ENST00000519112 CEP85Q6P2H3 762 aa17.16■□□□□ 0.34
BRD9-217ENST00000519112 ERO1BQ86YB8 467 aa17.16■□□□□ 0.34
BRD9-217ENST00000519112 FAM43AQ8N2R8 423 aa17.16■□□□□ 0.34
BRD9-217ENST00000519112 ENTPD3O75355 529 aa17.15■□□□□ 0.34
BRD9-217ENST00000519112 PKN2Q16513 984 aaKnown RBP17.15■□□□□ 0.34
BRD9-217ENST00000519112 OTUD7BQ6GQQ9 843 aa17.15■□□□□ 0.34
BRD9-217ENST00000519112 CDK5RAP2Q96SN8 1893 aa17.14■□□□□ 0.33
BRD9-217ENST00000519112 DDTLA6NHG4 134 aaPredicted RBP17.14■□□□□ 0.33
BRD9-217ENST00000519112 UQCRFS1P1P0C7P4 283 aa17.14■□□□□ 0.33
BRD9-217ENST00000519112 SOX10P56693 466 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms