RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	ZBTB48	P10074	688 aa	Predicted RBP	29.68	■■■□□ 2.34
CNOT7-204	ENST00000518885	TEPSIN	Q96N21	525 aa		29.68	■■■□□ 2.34
CNOT7-204	ENST00000518885	HMG20B	Q9P0W2	317 aa		29.68	■■■□□ 2.34
CNOT7-204	ENST00000518885	RPAP1	Q9BWH6	1393 aa	Predicted RBP	29.67	■■■□□ 2.34
CNOT7-204	ENST00000518885	CACNB3	P54284	484 aa		29.67	■■■□□ 2.34
CNOT7-204	ENST00000518885	ZBTB40	Q9NUA8	1239 aa		29.67	■■■□□ 2.34
CNOT7-204	ENST00000518885	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	29.67	■■■□□ 2.34
CNOT7-204	ENST00000518885	USP2	O75604	605 aa	Predicted RBP	29.66	■■■□□ 2.34
CNOT7-204	ENST00000518885	LDHC	P07864	332 aa		29.66	■■■□□ 2.34
CNOT7-204	ENST00000518885	INHBE	P58166	350 aa		29.66	■■■□□ 2.34
CNOT7-204	ENST00000518885	SPRYD7	Q5W111	196 aa		29.66	■■■□□ 2.34
CNOT7-204	ENST00000518885	DCAF15	Q66K64	600 aa		29.66	■■■□□ 2.34
CNOT7-204	ENST00000518885	FAM151A	Q8WW52	585 aa		29.66	■■■□□ 2.34
CNOT7-204	ENST00000518885	USP40	Q9NVE5	1235 aa		29.66	■■■□□ 2.34
CNOT7-204	ENST00000518885	IGSF3	O75054	1194 aa		29.65	■■■□□ 2.34
CNOT7-204	ENST00000518885	CDC42EP5	Q6NZY7	148 aa		29.65	■■■□□ 2.34
CNOT7-204	ENST00000518885	FAM163A	Q96GL9	167 aa	Predicted RBP	29.65	■■■□□ 2.34
CNOT7-204	ENST00000518885	ZNF512B	Q96KM6	892 aa	Predicted RBP	29.65	■■■□□ 2.34
CNOT7-204	ENST00000518885	RNF186	Q9NXI6	227 aa		29.65	■■■□□ 2.34
CNOT7-204	ENST00000518885	TSKS	Q9UJT2	592 aa		29.65	■■■□□ 2.34
CNOT7-204	ENST00000518885	GAK	O14976	1311 aa		29.65	■■■□□ 2.34
CNOT7-204	ENST00000518885	MANSC4	A6NHS7	340 aa	Predicted RBP	29.64	■■■□□ 2.34
CNOT7-204	ENST00000518885	FZD1	Q9UP38	647 aa		29.64	■■■□□ 2.34
CNOT7-204	ENST00000518885	CSAD	Q9Y600	493 aa		29.64	■■■□□ 2.34
CNOT7-204	ENST00000518885	TRPA1	O75762	1119 aa		29.63	■■■□□ 2.33
CNOT7-204	ENST00000518885	TM4SF4	P48230	202 aa		29.63	■■■□□ 2.33
CNOT7-204	ENST00000518885	DBNDD2	Q9BQY9	259 aa		29.63	■■■□□ 2.33
CNOT7-204	ENST00000518885	RAI14	Q9P0K7	980 aa		29.63	■■■□□ 2.33
CNOT7-204	ENST00000518885	LRP2BP	Q9P2M1	347 aa		29.63	■■■□□ 2.33
CNOT7-204	ENST00000518885	MAP4K4	O95819	1239 aa	Predicted RBP	29.62	■■■□□ 2.33
CNOT7-204	ENST00000518885	MCAM	P43121	646 aa		29.62	■■■□□ 2.33
CNOT7-204	ENST00000518885	MECOM	Q03112	1051 aa		29.62	■■■□□ 2.33
CNOT7-204	ENST00000518885	MKRN3	Q13064	507 aa	Known RBP	29.62	■■■□□ 2.33
CNOT7-204	ENST00000518885	EXOC6B	Q9Y2D4	811 aa		29.62	■■■□□ 2.33
CNOT7-204	ENST00000518885	MROH7-TTC4	A0A0A0MT08	1334 aa		29.62	■■■□□ 2.33
CNOT7-204	ENST00000518885	AKAP11	Q9UKA4	1901 aa		29.61	■■■□□ 2.33
CNOT7-204	ENST00000518885	ALDH1A1	P00352	501 aa		29.61	■■■□□ 2.33
CNOT7-204	ENST00000518885	MAP3K9	P80192	1104 aa		29.61	■■■□□ 2.33
CNOT7-204	ENST00000518885	WNK4	Q96J92	1243 aa		29.61	■■■□□ 2.33
CNOT7-204	ENST00000518885	NOL10	Q9BSC4	688 aa	Known RBP	29.61	■■■□□ 2.33
CNOT7-204	ENST00000518885	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	29.61	■■■□□ 2.33
CNOT7-204	ENST00000518885	CLMN	Q96JQ2	1002 aa		29.6	■■■□□ 2.33
CNOT7-204	ENST00000518885	ENTPD3	O75355	529 aa		29.59	■■■□□ 2.33
CNOT7-204	ENST00000518885	KIF1BP	Q96EK5	621 aa		29.59	■■■□□ 2.33
CNOT7-204	ENST00000518885	IDI2	Q9BXS1	227 aa		29.59	■■■□□ 2.33
CNOT7-204	ENST00000518885	RAB11FIP3	O75154	756 aa		29.58	■■■□□ 2.33
CNOT7-204	ENST00000518885	BTD	P43251	543 aa		29.58	■■■□□ 2.33
CNOT7-204	ENST00000518885	TCP10	Q12799	353 aa		29.58	■■■□□ 2.33
CNOT7-204	ENST00000518885	OTUD7B	Q6GQQ9	843 aa		29.58	■■■□□ 2.33
CNOT7-204	ENST00000518885	PI16	Q6UXB8	463 aa		29.58	■■■□□ 2.33
CNOT7-204	ENST00000518885	CDAN1	Q8IWY9	1227 aa		29.58	■■■□□ 2.33
CNOT7-204	ENST00000518885	CLASRP	Q8N2M8	674 aa	Known RBP	29.58	■■■□□ 2.33
CNOT7-204	ENST00000518885	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	29.58	■■■□□ 2.33
CNOT7-204	ENST00000518885	ZNF341	Q9BYN7	854 aa		29.58	■■■□□ 2.33
CNOT7-204	ENST00000518885	DBNL	Q9UJU6	430 aa	Known RBP	29.58	■■■□□ 2.33
CNOT7-204	ENST00000518885	MYH2	Q9UKX2	1941 aa		29.57	■■■□□ 2.32
CNOT7-204	ENST00000518885	AACS	Q86V21	672 aa		29.57	■■■□□ 2.32
CNOT7-204	ENST00000518885	RHPN1	Q8TCX5	695 aa		29.57	■■■□□ 2.32
CNOT7-204	ENST00000518885	NSUN4	Q96CB9	384 aa	Known RBP	29.57	■■■□□ 2.32
CNOT7-204	ENST00000518885	EAF2	Q96CJ1	260 aa	Predicted RBP	29.57	■■■□□ 2.32
CNOT7-204	ENST00000518885	WRNIP1	Q96S55	665 aa		29.57	■■■□□ 2.32
CNOT7-204	ENST00000518885	CCDC8	Q9H0W5	538 aa	Predicted RBP	29.57	■■■□□ 2.32
CNOT7-204	ENST00000518885	ELP3	Q9H9T3	547 aa		29.57	■■■□□ 2.32
CNOT7-204	ENST00000518885	GPR75-ASB3	A0A0A6YYF3	556 aa		29.56	■■■□□ 2.32
CNOT7-204	ENST00000518885	TBC1D9	Q6ZT07	1266 aa		29.56	■■■□□ 2.32
CNOT7-204	ENST00000518885	NFIA	Q12857	509 aa		29.55	■■■□□ 2.32
CNOT7-204	ENST00000518885	VGLL4	Q14135	290 aa		29.55	■■■□□ 2.32
CNOT7-204	ENST00000518885	OPTN	Q96CV9	577 aa		29.55	■■■□□ 2.32
CNOT7-204	ENST00000518885	SNRK	Q9NRH2	765 aa		29.55	■■■□□ 2.32
CNOT7-204	ENST00000518885	FAM198A	Q9UFP1	575 aa		29.55	■■■□□ 2.32
CNOT7-204	ENST00000518885	BAG3	O95817	575 aa		29.54	■■■□□ 2.32
CNOT7-204	ENST00000518885	RGS3	P49796	1198 aa		29.54	■■■□□ 2.32
CNOT7-204	ENST00000518885	C20orf194	Q5TEA3	1177 aa		29.54	■■■□□ 2.32
CNOT7-204	ENST00000518885	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	29.54	■■■□□ 2.32
CNOT7-204	ENST00000518885	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	29.54	■■■□□ 2.32
CNOT7-204	ENST00000518885	PLCG2	P16885	1265 aa		29.53	■■■□□ 2.32
CNOT7-204	ENST00000518885	NAA16	Q6N069	864 aa	Predicted RBP	29.53	■■■□□ 2.32
CNOT7-204	ENST00000518885	TMED8	Q6PL24	325 aa	Predicted RBP	29.53	■■■□□ 2.32
CNOT7-204	ENST00000518885	YTHDC1	Q96MU7	727 aa	Known RBP	29.53	■■■□□ 2.32
CNOT7-204	ENST00000518885	NPM3	O75607	178 aa	Known RBP	29.52	■■■□□ 2.32
CNOT7-204	ENST00000518885	IFIT2	P09913	472 aa	Known RBP	29.52	■■■□□ 2.32
CNOT7-204	ENST00000518885	CFHR5	Q9BXR6	569 aa		29.52	■■■□□ 2.32
CNOT7-204	ENST00000518885	TLR7	Q9NYK1	1049 aa	Known RBP	29.52	■■■□□ 2.32
CNOT7-204	ENST00000518885	GTF2A2	P52657	109 aa		29.51	■■■□□ 2.31
CNOT7-204	ENST00000518885	ERO1B	Q86YB8	467 aa		29.51	■■■□□ 2.31
CNOT7-204	ENST00000518885	IL1RAPL2	Q9NP60	686 aa		29.51	■■■□□ 2.31
CNOT7-204	ENST00000518885	OTOF	Q9HC10	1997 aa		29.5	■■■□□ 2.31
CNOT7-204	ENST00000518885	APBB1	O00213	710 aa		29.5	■■■□□ 2.31
CNOT7-204	ENST00000518885	CYP2E1	P05181	493 aa	Predicted RBP	29.5	■■■□□ 2.31
CNOT7-204	ENST00000518885	ZAP70	P43403	619 aa		29.5	■■■□□ 2.31
CNOT7-204	ENST00000518885	PICALM	Q13492	652 aa		29.5	■■■□□ 2.31
CNOT7-204	ENST00000518885	NOM1	Q5C9Z4	860 aa	Known RBP	29.5	■■■□□ 2.31
CNOT7-204	ENST00000518885	MIGA2	Q7L4E1	593 aa		29.5	■■■□□ 2.31
CNOT7-204	ENST00000518885	IFNL1	Q8IU54	200 aa		29.5	■■■□□ 2.31
CNOT7-204	ENST00000518885	CERS3	Q8IU89	383 aa		29.5	■■■□□ 2.31
CNOT7-204	ENST00000518885	SIRT2	Q8IXJ6	389 aa		29.5	■■■□□ 2.31
CNOT7-204	ENST00000518885	RFX7	Q2KHR2	1363 aa		29.5	■■■□□ 2.31
CNOT7-204	ENST00000518885	MAST2	Q6P0Q8	1798 aa		29.49	■■■□□ 2.31
CNOT7-204	ENST00000518885	SPDYE5	A6NIY4	337 aa		29.49	■■■□□ 2.31
CNOT7-204	ENST00000518885	WDHD1	O75717	1129 aa	Predicted RBP	29.49	■■■□□ 2.31

Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms