RNA–Protein interactions for RNA: ENST00000517352.1

TNFRSF11B-202, Transcript of TNF receptor superfamily member 11b, humanhuman

TSL 1 (best)

Gene TNFRSF11B, Length 1,144 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-202ENST00000517352 SLF2Q8IX21 1173 aa9.17□□□□□ -0.94
TNFRSF11B-202ENST00000517352 KLHDC4Q8TBB5 520 aa9.17□□□□□ -0.94
TNFRSF11B-202ENST00000517352 RAET1EQ8TD07 263 aa9.17□□□□□ -0.94
TNFRSF11B-202ENST00000517352 BRI3BPQ8WY22 251 aa9.17□□□□□ -0.94
TNFRSF11B-202ENST00000517352 LPIN2Q92539 896 aa9.17□□□□□ -0.94
TNFRSF11B-202ENST00000517352 ZDHHC15Q96MV8 337 aa9.17□□□□□ -0.94
TNFRSF11B-202ENST00000517352 PTPN18Q99952 460 aa9.17□□□□□ -0.94
TNFRSF11B-202ENST00000517352 SIL1Q9H173 461 aa9.17□□□□□ -0.94
TNFRSF11B-202ENST00000517352 PICK1Q9NRD5 415 aa9.17□□□□□ -0.94
TNFRSF11B-202ENST00000517352 TESPA1A2RU30 521 aaPredicted RBP9.16□□□□□ -0.94
TNFRSF11B-202ENST00000517352 POTEFA5A3E0 1075 aa9.16□□□□□ -0.94
TNFRSF11B-202ENST00000517352 SPDYE5A6NIY4 337 aa9.16□□□□□ -0.94
TNFRSF11B-202ENST00000517352 EYA2O00167 538 aa9.16□□□□□ -0.94
TNFRSF11B-202ENST00000517352 GNRH1P01148 92 aa9.16□□□□□ -0.94
TNFRSF11B-202ENST00000517352 PRKAR2AP13861 404 aaKnown RBP9.16□□□□□ -0.94
TNFRSF11B-202ENST00000517352 EN2P19622 333 aaPredicted RBP9.16□□□□□ -0.94
TNFRSF11B-202ENST00000517352 GJA5P36382 358 aa9.16□□□□□ -0.94
TNFRSF11B-202ENST00000517352 DZIP1Q86YF9 867 aaKnown RBP9.16□□□□□ -0.94
TNFRSF11B-202ENST00000517352 FAM43AQ8N2R8 423 aa9.16□□□□□ -0.94
TNFRSF11B-202ENST00000517352 ZGPATQ8N5A5 531 aaKnown RBP9.16□□□□□ -0.94
TNFRSF11B-202ENST00000517352 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.16□□□□□ -0.94
TNFRSF11B-202ENST00000517352 DPF3Q92784 378 aa9.16□□□□□ -0.94
TNFRSF11B-202ENST00000517352 USP40Q9NVE5 1235 aa9.16□□□□□ -0.94
TNFRSF11B-202ENST00000517352 LRRFIP2Q9Y608 721 aaKnown RBP9.16□□□□□ -0.94
TNFRSF11B-202ENST00000517352 IRS2Q9Y4H2 1338 aa9.15□□□□□ -0.94
TNFRSF11B-202ENST00000517352 IRF6O14896 467 aa9.15□□□□□ -0.94
TNFRSF11B-202ENST00000517352 TLR2O60603 784 aa9.15□□□□□ -0.94
TNFRSF11B-202ENST00000517352 PRMT2P55345 433 aa9.15□□□□□ -0.94
TNFRSF11B-202ENST00000517352 PPATQ06203 517 aa9.15□□□□□ -0.94
TNFRSF11B-202ENST00000517352 PPIL2Q13356 520 aa9.15□□□□□ -0.94
TNFRSF11B-202ENST00000517352 ATP2B3Q16720 1220 aa9.15□□□□□ -0.94
TNFRSF11B-202ENST00000517352 FKBP1CQ5VVH2 108 aa9.15□□□□□ -0.94
TNFRSF11B-202ENST00000517352 HHIPL2Q6UWX4 724 aa9.15□□□□□ -0.94
TNFRSF11B-202ENST00000517352 MRPL50Q8N5N7 158 aaKnown RBP9.15□□□□□ -0.94
TNFRSF11B-202ENST00000517352 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.15□□□□□ -0.94
TNFRSF11B-202ENST00000517352 SH3TC2Q8TF17 1288 aa9.15□□□□□ -0.94
TNFRSF11B-202ENST00000517352 FAM151AQ8WW52 585 aa9.15□□□□□ -0.94
TNFRSF11B-202ENST00000517352 ARMC5Q96C12 935 aa9.15□□□□□ -0.94
TNFRSF11B-202ENST00000517352 MRIQ9BWK5 157 aa9.15□□□□□ -0.94
TNFRSF11B-202ENST00000517352 ZCCHC17Q9NP64 241 aaKnown RBP9.15□□□□□ -0.94
TNFRSF11B-202ENST00000517352 ABCF2Q9UG63 623 aa9.15□□□□□ -0.94
TNFRSF11B-202ENST00000517352 DENND2AQ9ULE3 1009 aa9.15□□□□□ -0.94
TNFRSF11B-202ENST00000517352 PTCH2Q9Y6C5 1203 aa9.15□□□□□ -0.94
TNFRSF11B-202ENST00000517352 PDE4DIPQ5VU43 2346 aa9.15□□□□□ -0.95
TNFRSF11B-202ENST00000517352 AOX1Q06278 1338 aa9.14□□□□□ -0.95
TNFRSF11B-202ENST00000517352 PDHXO00330 501 aa9.14□□□□□ -0.95
TNFRSF11B-202ENST00000517352 PSMC4P43686 418 aa9.14□□□□□ -0.95
TNFRSF11B-202ENST00000517352 UBXN2AP68543 259 aa9.14□□□□□ -0.95
TNFRSF11B-202ENST00000517352 LACTBP83111 547 aaPredicted RBP9.14□□□□□ -0.95
TNFRSF11B-202ENST00000517352 RABL6Q3YEC7 729 aaPredicted RBP9.14□□□□□ -0.95
TNFRSF11B-202ENST00000517352 SPTY2D1Q68D10 685 aaPredicted RBP9.14□□□□□ -0.95
TNFRSF11B-202ENST00000517352 CDAN1Q8IWY9 1227 aa9.14□□□□□ -0.95
TNFRSF11B-202ENST00000517352 NKX2-3Q8TAU0 364 aa9.14□□□□□ -0.95
TNFRSF11B-202ENST00000517352 SMCR8Q8TEV9 937 aaPredicted RBP9.14□□□□□ -0.95
TNFRSF11B-202ENST00000517352 SSH1Q8WYL5 1049 aa9.14□□□□□ -0.95
TNFRSF11B-202ENST00000517352 MS4A4AQ96JQ5 239 aa9.14□□□□□ -0.95
TNFRSF11B-202ENST00000517352 TRIM47Q96LD4 638 aa9.14□□□□□ -0.95
TNFRSF11B-202ENST00000517352 TEPSINQ96N21 525 aa9.14□□□□□ -0.95
TNFRSF11B-202ENST00000517352 PARK7Q99497 189 aaKnown RBP9.14□□□□□ -0.95
TNFRSF11B-202ENST00000517352 NOL10Q9BSC4 688 aaKnown RBP9.14□□□□□ -0.95
TNFRSF11B-202ENST00000517352 CPA4Q9UI42 421 aa9.14□□□□□ -0.95
TNFRSF11B-202ENST00000517352 SPEF2Q9C093 1822 aa9.14□□□□□ -0.95
TNFRSF11B-202ENST00000517352 UTYO14607 1347 aa9.13□□□□□ -0.95
TNFRSF11B-202ENST00000517352 BTBD19C9JJ37 291 aa9.13□□□□□ -0.95
TNFRSF11B-202ENST00000517352 IL15P40933 162 aaPredicted RBP9.13□□□□□ -0.95
TNFRSF11B-202ENST00000517352 FCGRTP55899 365 aa9.13□□□□□ -0.95
TNFRSF11B-202ENST00000517352 GRIK5Q16478 980 aa9.13□□□□□ -0.95
TNFRSF11B-202ENST00000517352 APOBEC3HQ6NTF7 200 aaKnown RBP9.13□□□□□ -0.95
TNFRSF11B-202ENST00000517352 GADL1Q6ZQY3 521 aa9.13□□□□□ -0.95
TNFRSF11B-202ENST00000517352 FASTKD5Q7L8L6 764 aaKnown RBP9.13□□□□□ -0.95
TNFRSF11B-202ENST00000517352 KAZALD1Q96I82 304 aa9.13□□□□□ -0.95
TNFRSF11B-202ENST00000517352 ZNF333Q96JL9 665 aa9.13□□□□□ -0.95
TNFRSF11B-202ENST00000517352 NEUROD6Q96NK8 337 aa9.13□□□□□ -0.95
TNFRSF11B-202ENST00000517352 TRIM34Q9BYJ4 488 aa9.13□□□□□ -0.95
TNFRSF11B-202ENST00000517352 API5Q9BZZ5 524 aaKnown RBP9.13□□□□□ -0.95
TNFRSF11B-202ENST00000517352 USP44Q9H0E7 712 aa9.13□□□□□ -0.95
TNFRSF11B-202ENST00000517352 SNCAIPQ9Y6H5 919 aa9.13□□□□□ -0.95
TNFRSF11B-202ENST00000517352 MYH3P11055 1940 aa9.13□□□□□ -0.95
TNFRSF11B-202ENST00000517352 TNRC18O15417 2968 aaPredicted RBP9.12□□□□□ -0.95
TNFRSF11B-202ENST00000517352 SSC5DA1L4H1 1573 aa9.12□□□□□ -0.95
TNFRSF11B-202ENST00000517352 KIF16BQ96L93 1317 aa9.12□□□□□ -0.95
TNFRSF11B-202ENST00000517352 SEMA3EO15041 775 aa9.12□□□□□ -0.95
TNFRSF11B-202ENST00000517352 PRR29P0C7W0 189 aa9.12□□□□□ -0.95
TNFRSF11B-202ENST00000517352 INPP5BP32019 993 aa9.12□□□□□ -0.95
TNFRSF11B-202ENST00000517352 PICALMQ13492 652 aa9.12□□□□□ -0.95
TNFRSF11B-202ENST00000517352 DIXDC1Q155Q3 683 aa9.12□□□□□ -0.95
TNFRSF11B-202ENST00000517352 ALDH1L2Q3SY69 923 aa9.12□□□□□ -0.95
TNFRSF11B-202ENST00000517352 HABP4Q5JVS0 413 aaKnown RBP9.12□□□□□ -0.95
TNFRSF11B-202ENST00000517352 CDC42EP5Q6NZY7 148 aa9.12□□□□□ -0.95
TNFRSF11B-202ENST00000517352 ANKRD23Q86SG2 305 aa9.12□□□□□ -0.95
TNFRSF11B-202ENST00000517352 ANKRD44Q8N8A2 993 aa9.12□□□□□ -0.95
TNFRSF11B-202ENST00000517352 HTATIP2Q9BUP3 242 aa9.12□□□□□ -0.95
TNFRSF11B-202ENST00000517352 AKAP2Q9Y2D5 859 aa9.12□□□□□ -0.95
TNFRSF11B-202ENST00000517352 ZHX2Q9Y6X8 837 aa9.12□□□□□ -0.95
TNFRSF11B-202ENST00000517352 MYPNQ86TC9 1320 aa9.11□□□□□ -0.95
TNFRSF11B-202ENST00000517352 CIAO1O76071 339 aa9.11□□□□□ -0.95
TNFRSF11B-202ENST00000517352 GRK4P32298 578 aa9.11□□□□□ -0.95
TNFRSF11B-202ENST00000517352 GSTO1P78417 241 aa9.11□□□□□ -0.95
TNFRSF11B-202ENST00000517352 OS9Q13438 667 aaPredicted RBP9.11□□□□□ -0.95
TNFRSF11B-202ENST00000517352 CCAR1Q8IX12 1150 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms