RNA–Protein interactions for RNA: ENST00000515233.5

DDR1-278, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-278ENST00000515233 NBPF11Q86T75 865 aa18.79■□□□□ 0.6
DDR1-278ENST00000515233 ZNF333Q96JL9 665 aa18.79■□□□□ 0.6
DDR1-278ENST00000515233 MKI67P46013 3256 aaKnown RBP18.79■□□□□ 0.6
DDR1-278ENST00000515233 BTBD19C9JJ37 291 aa18.78■□□□□ 0.6
DDR1-278ENST00000515233 ZNF341Q9BYN7 854 aa18.78■□□□□ 0.6
DDR1-278ENST00000515233 MYH13Q9UKX3 1938 aa18.78■□□□□ 0.6
DDR1-278ENST00000515233 ZBTB22O15209 634 aa18.77■□□□□ 0.6
DDR1-278ENST00000515233 CIAO1O76071 339 aa18.77■□□□□ 0.6
DDR1-278ENST00000515233 EN2P19622 333 aaPredicted RBP18.77■□□□□ 0.6
DDR1-278ENST00000515233 TMEM106CQ9BVX2 250 aa18.77■□□□□ 0.6
DDR1-278ENST00000515233 ZNF112Q9UJU3 913 aa18.77■□□□□ 0.6
DDR1-278ENST00000515233 PTCH2Q9Y6C5 1203 aa18.77■□□□□ 0.6
DDR1-278ENST00000515233 KIAA0100Q14667 2235 aaKnown RBP18.76■□□□□ 0.59
DDR1-278ENST00000515233 GNRH1P01148 92 aa18.76■□□□□ 0.59
DDR1-278ENST00000515233 SLC9C1Q4G0N8 1177 aa18.76■□□□□ 0.59
DDR1-278ENST00000515233 MIGA2Q7L4E1 593 aa18.76■□□□□ 0.59
DDR1-278ENST00000515233 TRMT2AQ8IZ69 625 aaKnown RBP18.76■□□□□ 0.59
DDR1-278ENST00000515233 CEP126Q9P2H0 1117 aa18.76■□□□□ 0.59
DDR1-278ENST00000515233 DAGLAQ9Y4D2 1042 aa18.76■□□□□ 0.59
DDR1-278ENST00000515233 INPP5BP32019 993 aa18.75■□□□□ 0.59
DDR1-278ENST00000515233 LACTBP83111 547 aaPredicted RBP18.75■□□□□ 0.59
DDR1-278ENST00000515233 KIF22Q14807 665 aa18.75■□□□□ 0.59
DDR1-278ENST00000515233 CDC42EP5Q6NZY7 148 aa18.75■□□□□ 0.59
DDR1-278ENST00000515233 SMC4Q9NTJ3 1288 aa18.75■□□□□ 0.59
DDR1-278ENST00000515233 GNL3LQ9NVN8 582 aaKnown RBP18.75■□□□□ 0.59
DDR1-278ENST00000515233 SALL1Q9NSC2 1324 aa18.74■□□□□ 0.59
DDR1-278ENST00000515233 SEMA3EO15041 775 aa18.74■□□□□ 0.59
DDR1-278ENST00000515233 UBTFL1P0CB47 393 aaPredicted RBP18.74■□□□□ 0.59
DDR1-278ENST00000515233 PRDX5P30044 214 aa18.74■□□□□ 0.59
DDR1-278ENST00000515233 PRMT2P55345 433 aa18.74■□□□□ 0.59
DDR1-278ENST00000515233 ATP2B3Q16720 1220 aa18.74■□□□□ 0.59
DDR1-278ENST00000515233 C17orf99Q6UX52 265 aa18.74■□□□□ 0.59
DDR1-278ENST00000515233 CDCA7LQ96GN5 454 aa18.74■□□□□ 0.59
DDR1-278ENST00000515233 KCNH4Q9UQ05 1017 aa18.74■□□□□ 0.59
DDR1-278ENST00000515233 HDAC5Q9UQL6 1122 aa18.74■□□□□ 0.59
DDR1-278ENST00000515233 BRCA2P51587 3418 aa18.74■□□□□ 0.59
DDR1-278ENST00000515233 LDHBP07195 334 aaKnown RBP18.73■□□□□ 0.59
DDR1-278ENST00000515233 CT47B1P0C2W7 299 aaPredicted RBP18.73■□□□□ 0.59
DDR1-278ENST00000515233 DIXDC1Q155Q3 683 aa18.73■□□□□ 0.59
DDR1-278ENST00000515233 ANKRD23Q86SG2 305 aa18.73■□□□□ 0.59
DDR1-278ENST00000515233 ARHGAP39Q9C0H5 1083 aa18.73■□□□□ 0.59
DDR1-278ENST00000515233 FAM198AQ9UFP1 575 aa18.73■□□□□ 0.59
DDR1-278ENST00000515233 DENND2AQ9ULE3 1009 aa18.73■□□□□ 0.59
DDR1-278ENST00000515233 IL15P40933 162 aaPredicted RBP18.72■□□□□ 0.59
DDR1-278ENST00000515233 TCP10Q12799 353 aa18.72■□□□□ 0.59
DDR1-278ENST00000515233 NFIAQ12857 509 aa18.72■□□□□ 0.59
DDR1-278ENST00000515233 NOL9Q5SY16 702 aaKnown RBP18.72■□□□□ 0.59
DDR1-278ENST00000515233 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.72■□□□□ 0.59
DDR1-278ENST00000515233 SIL1Q9H173 461 aa18.72■□□□□ 0.59
DDR1-278ENST00000515233 USP40Q9NVE5 1235 aa18.72■□□□□ 0.59
DDR1-278ENST00000515233 AK9Q5TCS8 1911 aa18.72■□□□□ 0.59
DDR1-278ENST00000515233 COPRSQ9NQ92 184 aa18.71■□□□□ 0.59
DDR1-278ENST00000515233 NOB1Q9ULX3 412 aaKnown RBP18.71■□□□□ 0.59
DDR1-278ENST00000515233 PDHXO00330 501 aa18.7■□□□□ 0.58
DDR1-278ENST00000515233 PHKA1P46020 1223 aa18.7■□□□□ 0.58
DDR1-278ENST00000515233 MOGSQ13724 837 aa18.7■□□□□ 0.58
DDR1-278ENST00000515233 SLC4A8Q2Y0W8 1093 aa18.7■□□□□ 0.58
DDR1-278ENST00000515233 HABP4Q5JVS0 413 aaKnown RBP18.7■□□□□ 0.58
DDR1-278ENST00000515233 ZGPATQ8N5A5 531 aaKnown RBP18.7■□□□□ 0.58
DDR1-278ENST00000515233 IDI2Q9BXS1 227 aa18.7■□□□□ 0.58
DDR1-278ENST00000515233 API5Q9BZZ5 524 aaKnown RBP18.7■□□□□ 0.58
DDR1-278ENST00000515233 ZSWIM8A7E2V4 1837 aa18.7■□□□□ 0.58
DDR1-278ENST00000515233 CXCL11O14625 94 aa18.69■□□□□ 0.58
DDR1-278ENST00000515233 CCDC102BQ68D86 513 aa18.69■□□□□ 0.58
DDR1-278ENST00000515233 FAM163AQ96GL9 167 aaPredicted RBP18.69■□□□□ 0.58
DDR1-278ENST00000515233 CPA4Q9UI42 421 aa18.69■□□□□ 0.58
DDR1-278ENST00000515233 LRRFIP2Q9Y608 721 aaKnown RBP18.69■□□□□ 0.58
DDR1-278ENST00000515233 ADGRA2Q96PE1 1338 aa18.69■□□□□ 0.58
DDR1-278ENST00000515233 ENTPD3O75355 529 aa18.68■□□□□ 0.58
DDR1-278ENST00000515233 CTGFP29279 349 aa18.68■□□□□ 0.58
DDR1-278ENST00000515233 MAP3K10Q02779 954 aa18.68■□□□□ 0.58
DDR1-278ENST00000515233 ZFPM1Q8IX07 1006 aa18.68■□□□□ 0.58
DDR1-278ENST00000515233 SH3TC2Q8TF17 1288 aa18.68■□□□□ 0.58
DDR1-278ENST00000515233 SRRDQ9UH36 339 aa18.68■□□□□ 0.58
DDR1-278ENST00000515233 PA2G4Q9UQ80 394 aaKnown RBP18.68■□□□□ 0.58
DDR1-278ENST00000515233 GAKO14976 1311 aa18.68■□□□□ 0.58
DDR1-278ENST00000515233 PDS5AQ29RF7 1337 aaKnown RBP18.68■□□□□ 0.58
DDR1-278ENST00000515233 MYH2Q9UKX2 1941 aa18.67■□□□□ 0.58
DDR1-278ENST00000515233 PHF20L1A8MW92 1017 aa18.67■□□□□ 0.58
DDR1-278ENST00000515233 HOXD10P28358 340 aa18.67■□□□□ 0.58
DDR1-278ENST00000515233 PSMC4P43686 418 aa18.67■□□□□ 0.58
DDR1-278ENST00000515233 ATRNL1Q5VV63 1379 aa18.67■□□□□ 0.58
DDR1-278ENST00000515233 ADORA1P30542 326 aa18.66■□□□□ 0.58
DDR1-278ENST00000515233 TIMM10P62072 90 aa18.66■□□□□ 0.58
DDR1-278ENST00000515233 SLF2Q8IX21 1173 aa18.66■□□□□ 0.58
DDR1-278ENST00000515233 TRIM47Q96LD4 638 aa18.66■□□□□ 0.58
DDR1-278ENST00000515233 OSBPP22059 807 aa18.65■□□□□ 0.58
DDR1-278ENST00000515233 RGS3P49796 1198 aa18.65■□□□□ 0.58
DDR1-278ENST00000515233 GPAT2Q6NUI2 795 aa18.65■□□□□ 0.58
DDR1-278ENST00000515233 SCYL3Q8IZE3 742 aa18.65■□□□□ 0.58
DDR1-278ENST00000515233 ARHGAP45Q92619 1136 aa18.65■□□□□ 0.58
DDR1-278ENST00000515233 MEIS3Q99687 375 aa18.65■□□□□ 0.58
DDR1-278ENST00000515233 FMNL1O95466 1100 aaPredicted RBP18.64■□□□□ 0.57
DDR1-278ENST00000515233 MYCP01106 439 aaPredicted RBP18.64■□□□□ 0.57
DDR1-278ENST00000515233 BCRP11274 1271 aa18.64■□□□□ 0.57
DDR1-278ENST00000515233 PTPRAP18433 802 aa18.64■□□□□ 0.57
DDR1-278ENST00000515233 MTX1Q13505 466 aa18.64■□□□□ 0.57
DDR1-278ENST00000515233 RASGRF1Q13972 1273 aa18.64■□□□□ 0.57
DDR1-278ENST00000515233 SPTY2D1Q68D10 685 aaPredicted RBP18.64■□□□□ 0.57
DDR1-278ENST00000515233 SH3BP5LQ7L8J4 393 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms