RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 CTU1Q7Z7A3 348 aaKnown RBP12.93□□□□□ -0.34
HMGXB3-205ENST00000514469 IFNL1Q8IU54 200 aa12.93□□□□□ -0.34
HMGXB3-205ENST00000514469 ITPRIPQ8IWB1 547 aa12.93□□□□□ -0.34
HMGXB3-205ENST00000514469 SSH3Q8TE77 659 aa12.93□□□□□ -0.34
HMGXB3-205ENST00000514469 ZNF296Q8WUU4 475 aaPredicted RBP12.93□□□□□ -0.34
HMGXB3-205ENST00000514469 OPTNQ96CV9 577 aa12.93□□□□□ -0.34
HMGXB3-205ENST00000514469 HOOK2Q96ED9 719 aa12.93□□□□□ -0.34
HMGXB3-205ENST00000514469 TESPA1A2RU30 521 aaPredicted RBP12.92□□□□□ -0.34
HMGXB3-205ENST00000514469 GPR25O00155 361 aa12.92□□□□□ -0.34
HMGXB3-205ENST00000514469 ZBTB7BO15156 539 aaPredicted RBP12.92□□□□□ -0.34
HMGXB3-205ENST00000514469 ARID4AP29374 1257 aaPredicted RBP12.92□□□□□ -0.34
HMGXB3-205ENST00000514469 MAP3K9P80192 1104 aa12.92□□□□□ -0.34
HMGXB3-205ENST00000514469 NFIAQ12857 509 aa12.92□□□□□ -0.34
HMGXB3-205ENST00000514469 G3BP1Q13283 466 aaKnown RBP eCLIP12.92□□□□□ -0.34
HMGXB3-205ENST00000514469 FAM151AQ8WW52 585 aa12.92□□□□□ -0.34
HMGXB3-205ENST00000514469 R3HDMLQ9H3Y0 253 aa12.92□□□□□ -0.34
HMGXB3-205ENST00000514469 C1orf115Q9H7X2 142 aa12.92□□□□□ -0.34
HMGXB3-205ENST00000514469 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.92□□□□□ -0.34
HMGXB3-205ENST00000514469 CCDC85CA6NKD9 419 aa12.91□□□□□ -0.34
HMGXB3-205ENST00000514469 ATP8B2P98198 1209 aa12.91□□□□□ -0.34
HMGXB3-205ENST00000514469 DCAF15Q66K64 600 aa12.91□□□□□ -0.34
HMGXB3-205ENST00000514469 DZIP1Q86YF9 867 aaKnown RBP12.91□□□□□ -0.34
HMGXB3-205ENST00000514469 CNKSR2Q8WXI2 1034 aa12.91□□□□□ -0.34
HMGXB3-205ENST00000514469 NEUROD6Q96NK8 337 aa12.91□□□□□ -0.34
HMGXB3-205ENST00000514469 WRNIP1Q96S55 665 aa12.91□□□□□ -0.34
HMGXB3-205ENST00000514469 GPR108Q9NPR9 543 aa12.91□□□□□ -0.34
HMGXB3-205ENST00000514469 HMG20BQ9P0W2 317 aa12.91□□□□□ -0.34
HMGXB3-205ENST00000514469 FAM198AQ9UFP1 575 aa12.91□□□□□ -0.34
HMGXB3-205ENST00000514469 CSADQ9Y600 493 aa12.91□□□□□ -0.34
HMGXB3-205ENST00000514469 SNCAIPQ9Y6H5 919 aa12.91□□□□□ -0.34
HMGXB3-205ENST00000514469 MAST2Q6P0Q8 1798 aa12.91□□□□□ -0.34
HMGXB3-205ENST00000514469 ATRNL1Q5VV63 1379 aa12.91□□□□□ -0.34
HMGXB3-205ENST00000514469 MROH7-TTC4A0A0A0MT08 1334 aa12.9□□□□□ -0.34
HMGXB3-205ENST00000514469 SPDYE5A6NIY4 337 aa12.9□□□□□ -0.34
HMGXB3-205ENST00000514469 SPTY2D1Q68D10 685 aaPredicted RBP12.9□□□□□ -0.34
HMGXB3-205ENST00000514469 PI16Q6UXB8 463 aa12.9□□□□□ -0.34
HMGXB3-205ENST00000514469 FAM163AQ96GL9 167 aaPredicted RBP12.9□□□□□ -0.34
HMGXB3-205ENST00000514469 MS4A4AQ96JQ5 239 aa12.9□□□□□ -0.34
HMGXB3-205ENST00000514469 PTPN18Q99952 460 aa12.9□□□□□ -0.34
HMGXB3-205ENST00000514469 IDI2Q9BXS1 227 aa12.9□□□□□ -0.34
HMGXB3-205ENST00000514469 USP40Q9NVE5 1235 aa12.9□□□□□ -0.34
HMGXB3-205ENST00000514469 ABCF2Q9UG63 623 aa12.9□□□□□ -0.34
HMGXB3-205ENST00000514469 DOCK2Q92608 1830 aa12.9□□□□□ -0.34
HMGXB3-205ENST00000514469 FKTNO75072 461 aa12.89□□□□□ -0.35
HMGXB3-205ENST00000514469 MCAMP43121 646 aa12.89□□□□□ -0.35
HMGXB3-205ENST00000514469 GTF2A2P52657 109 aa12.89□□□□□ -0.35
HMGXB3-205ENST00000514469 MECOMQ03112 1051 aa12.89□□□□□ -0.35
HMGXB3-205ENST00000514469 TCP10Q12799 353 aa12.89□□□□□ -0.35
HMGXB3-205ENST00000514469 TNNI3KQ59H18 835 aa12.89□□□□□ -0.35
HMGXB3-205ENST00000514469 GORABQ5T7V8 394 aa12.89□□□□□ -0.35
HMGXB3-205ENST00000514469 SLF2Q8IX21 1173 aa12.89□□□□□ -0.35
HMGXB3-205ENST00000514469 SPATA5Q8NB90 893 aa12.89□□□□□ -0.35
HMGXB3-205ENST00000514469 ZNF384Q8TF68 577 aa12.89□□□□□ -0.35
HMGXB3-205ENST00000514469 OTUD5Q96G74 571 aa12.89□□□□□ -0.35
HMGXB3-205ENST00000514469 ZNF341Q9BYN7 854 aa12.89□□□□□ -0.35
HMGXB3-205ENST00000514469 NOP58Q9Y2X3 529 aaKnown RBP12.89□□□□□ -0.35
HMGXB3-205ENST00000514469 FPGT-TNNI3KV9GXZ4 949 aa12.89□□□□□ -0.35
HMGXB3-205ENST00000514469 HTTP42858 3142 aa12.89□□□□□ -0.35
HMGXB3-205ENST00000514469 MYH2Q9UKX2 1941 aa12.88□□□□□ -0.35
HMGXB3-205ENST00000514469 ENTPD3O75355 529 aa12.88□□□□□ -0.35
HMGXB3-205ENST00000514469 BTDP43251 543 aa12.88□□□□□ -0.35
HMGXB3-205ENST00000514469 PKN2Q16513 984 aaKnown RBP12.88□□□□□ -0.35
HMGXB3-205ENST00000514469 OTUD7BQ6GQQ9 843 aa12.88□□□□□ -0.35
HMGXB3-205ENST00000514469 CEP85Q6P2H3 762 aa12.88□□□□□ -0.35
HMGXB3-205ENST00000514469 ERICH6Q7L0X2 663 aa12.88□□□□□ -0.35
HMGXB3-205ENST00000514469 MIGA2Q7L4E1 593 aa12.88□□□□□ -0.35
HMGXB3-205ENST00000514469 ERO1BQ86YB8 467 aa12.88□□□□□ -0.35
HMGXB3-205ENST00000514469 PANK1Q8TE04 598 aa12.88□□□□□ -0.35
HMGXB3-205ENST00000514469 BRI3BPQ8WY22 251 aa12.88□□□□□ -0.35
HMGXB3-205ENST00000514469 ZKSCAN4Q969J2 545 aaPredicted RBP12.88□□□□□ -0.35
HMGXB3-205ENST00000514469 ZNF112Q9UJU3 913 aa12.88□□□□□ -0.35
HMGXB3-205ENST00000514469 GPR75-ASB3A0A0A6YYF3 556 aa12.87□□□□□ -0.35
HMGXB3-205ENST00000514469 CCL15-CCL14A0A0B4J2E2 113 aa12.87□□□□□ -0.35
HMGXB3-205ENST00000514469 SURF6O75683 361 aaKnown RBP12.87□□□□□ -0.35
HMGXB3-205ENST00000514469 WDHD1O75717 1129 aaPredicted RBP12.87□□□□□ -0.35
HMGXB3-205ENST00000514469 UQCRFS1P1P0C7P4 283 aa12.87□□□□□ -0.35
HMGXB3-205ENST00000514469 INPP5BP32019 993 aa12.87□□□□□ -0.35
HMGXB3-205ENST00000514469 RGS19P49795 217 aa12.87□□□□□ -0.35
HMGXB3-205ENST00000514469 RGS3P49796 1198 aa12.87□□□□□ -0.35
HMGXB3-205ENST00000514469 CRHR2Q13324 411 aa12.87□□□□□ -0.35
HMGXB3-205ENST00000514469 PPIL2Q13356 520 aa12.87□□□□□ -0.35
HMGXB3-205ENST00000514469 OS9Q13438 667 aaPredicted RBP12.87□□□□□ -0.35
HMGXB3-205ENST00000514469 CCL15Q16663 113 aa12.87□□□□□ -0.35
HMGXB3-205ENST00000514469 NOL9Q5SY16 702 aaKnown RBP12.87□□□□□ -0.35
HMGXB3-205ENST00000514469 ZFPM1Q8IX07 1006 aa12.87□□□□□ -0.35
HMGXB3-205ENST00000514469 NSUN4Q96CB9 384 aaKnown RBP12.87□□□□□ -0.35
HMGXB3-205ENST00000514469 DBNDD2Q9BQY9 259 aa12.87□□□□□ -0.35
HMGXB3-205ENST00000514469 COL2A1P02458 1487 aaPredicted RBP12.86□□□□□ -0.35
HMGXB3-205ENST00000514469 MS4A1P11836 297 aa12.86□□□□□ -0.35
HMGXB3-205ENST00000514469 RHBDL3P58872 404 aa12.86□□□□□ -0.35
HMGXB3-205ENST00000514469 GSTO1P78417 241 aa12.86□□□□□ -0.35
HMGXB3-205ENST00000514469 PPATQ06203 517 aa12.86□□□□□ -0.35
HMGXB3-205ENST00000514469 TBC1D9Q6ZT07 1266 aa12.86□□□□□ -0.35
HMGXB3-205ENST00000514469 DDX4Q9NQI0 724 aaKnown RBP12.86□□□□□ -0.35
HMGXB3-205ENST00000514469 HPS5Q9UPZ3 1129 aa12.86□□□□□ -0.35
HMGXB3-205ENST00000514469 IRF6O14896 467 aa12.85□□□□□ -0.35
HMGXB3-205ENST00000514469 MAP4K4O95819 1239 aaPredicted RBP12.85□□□□□ -0.35
HMGXB3-205ENST00000514469 CETPP11597 493 aa12.85□□□□□ -0.35
HMGXB3-205ENST00000514469 SNAPC2Q13487 334 aa12.85□□□□□ -0.35
HMGXB3-205ENST00000514469 TTC39AQ5SRH9 613 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms