RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 SALL1Q9NSC2 1324 aa15.68■□□□□ 0.1
VEGFA-216ENST00000512683 IL15P40933 162 aaPredicted RBP15.67■□□□□ 0.1
VEGFA-216ENST00000512683 FAM43AQ8N2R8 423 aa15.67■□□□□ 0.1
VEGFA-216ENST00000512683 KLHDC4Q8TBB5 520 aa15.67■□□□□ 0.1
VEGFA-216ENST00000512683 DENND2AQ9ULE3 1009 aa15.67■□□□□ 0.1
VEGFA-216ENST00000512683 IRF6O14896 467 aa15.66■□□□□ 0.1
VEGFA-216ENST00000512683 UBTFL1P0CB47 393 aaPredicted RBP15.66■□□□□ 0.1
VEGFA-216ENST00000512683 ATG9AQ7Z3C6 839 aa15.66■□□□□ 0.1
VEGFA-216ENST00000512683 ZGPATQ8N5A5 531 aaKnown RBP15.66■□□□□ 0.1
VEGFA-216ENST00000512683 CNKSR2Q8WXI2 1034 aa15.66■□□□□ 0.1
VEGFA-216ENST00000512683 ZNF333Q96JL9 665 aa15.66■□□□□ 0.1
VEGFA-216ENST00000512683 API5Q9BZZ5 524 aaKnown RBP15.66■□□□□ 0.1
VEGFA-216ENST00000512683 POTEFA5A3E0 1075 aa15.65■□□□□ 0.1
VEGFA-216ENST00000512683 BTBD19C9JJ37 291 aa15.65■□□□□ 0.1
VEGFA-216ENST00000512683 LDHBP07195 334 aaKnown RBP15.65■□□□□ 0.1
VEGFA-216ENST00000512683 HOXD10P28358 340 aa15.65■□□□□ 0.1
VEGFA-216ENST00000512683 CACNB3P54284 484 aa15.65■□□□□ 0.1
VEGFA-216ENST00000512683 ANKRD23Q86SG2 305 aa15.65■□□□□ 0.1
VEGFA-216ENST00000512683 SLF2Q8IX21 1173 aa15.65■□□□□ 0.1
VEGFA-216ENST00000512683 ZKSCAN4Q969J2 545 aaPredicted RBP15.65■□□□□ 0.1
VEGFA-216ENST00000512683 SMC4Q9NTJ3 1288 aa15.65■□□□□ 0.1
VEGFA-216ENST00000512683 KCNH4Q9UQ05 1017 aa15.65■□□□□ 0.1
VEGFA-216ENST00000512683 CXCL11O14625 94 aa15.64■□□□□ 0.09
VEGFA-216ENST00000512683 LACTBP83111 547 aaPredicted RBP15.64■□□□□ 0.09
VEGFA-216ENST00000512683 ATP2B3Q16720 1220 aa15.64■□□□□ 0.09
VEGFA-216ENST00000512683 SLC9C1Q4G0N8 1177 aa15.64■□□□□ 0.09
VEGFA-216ENST00000512683 NOL9Q5SY16 702 aaKnown RBP15.64■□□□□ 0.09
VEGFA-216ENST00000512683 ARHGAP45Q92619 1136 aa15.64■□□□□ 0.09
VEGFA-216ENST00000512683 FAM163AQ96GL9 167 aaPredicted RBP15.64■□□□□ 0.09
VEGFA-216ENST00000512683 COPRSQ9NQ92 184 aa15.64■□□□□ 0.09
VEGFA-216ENST00000512683 CDC42EP5Q6NZY7 148 aa15.63■□□□□ 0.09
VEGFA-216ENST00000512683 C17orf99Q6UX52 265 aa15.63■□□□□ 0.09
VEGFA-216ENST00000512683 IDI2Q9BXS1 227 aa15.63■□□□□ 0.09
VEGFA-216ENST00000512683 DAGLAQ9Y4D2 1042 aa15.63■□□□□ 0.09
VEGFA-216ENST00000512683 ECM29Q5VYK3 1845 aa15.63■□□□□ 0.09
VEGFA-216ENST00000512683 PDS5AQ29RF7 1337 aaKnown RBP15.63■□□□□ 0.09
VEGFA-216ENST00000512683 TNRC18O15417 2968 aaPredicted RBP15.63■□□□□ 0.09
VEGFA-216ENST00000512683 ENTPD3O75355 529 aa15.62■□□□□ 0.09
VEGFA-216ENST00000512683 MAP4K4O95819 1239 aaPredicted RBP15.62■□□□□ 0.09
VEGFA-216ENST00000512683 CAPN2P17655 700 aa15.62■□□□□ 0.09
VEGFA-216ENST00000512683 EN2P19622 333 aaPredicted RBP15.62■□□□□ 0.09
VEGFA-216ENST00000512683 MAP3K10Q02779 954 aa15.62■□□□□ 0.09
VEGFA-216ENST00000512683 SPTY2D1Q68D10 685 aaPredicted RBP15.62■□□□□ 0.09
VEGFA-216ENST00000512683 MIGA2Q7L4E1 593 aa15.62■□□□□ 0.09
VEGFA-216ENST00000512683 USP40Q9NVE5 1235 aa15.62■□□□□ 0.09
VEGFA-216ENST00000512683 AKAP2Q9Y2D5 859 aa15.62■□□□□ 0.09
VEGFA-216ENST00000512683 CAP1Q01518 475 aa15.61■□□□□ 0.09
VEGFA-216ENST00000512683 SLC4A8Q2Y0W8 1093 aa15.61■□□□□ 0.09
VEGFA-216ENST00000512683 FASTKD5Q7L8L6 764 aaKnown RBP15.61■□□□□ 0.09
VEGFA-216ENST00000512683 NOB1Q9ULX3 412 aaKnown RBP15.61■□□□□ 0.09
VEGFA-216ENST00000512683 PTCH2Q9Y6C5 1203 aa15.61■□□□□ 0.09
VEGFA-216ENST00000512683 NPM3O75607 178 aaKnown RBP15.6■□□□□ 0.09
VEGFA-216ENST00000512683 GNAI3P08754 354 aa15.6■□□□□ 0.09
VEGFA-216ENST00000512683 PRDX5P30044 214 aa15.6■□□□□ 0.09
VEGFA-216ENST00000512683 INPP5BP32019 993 aa15.6■□□□□ 0.09
VEGFA-216ENST00000512683 NKX2-3Q8TAU0 364 aa15.6■□□□□ 0.09
VEGFA-216ENST00000512683 PDHXO00330 501 aa15.59■□□□□ 0.09
VEGFA-216ENST00000512683 TCP10Q12799 353 aa15.59■□□□□ 0.09
VEGFA-216ENST00000512683 DIXDC1Q155Q3 683 aa15.59■□□□□ 0.09
VEGFA-216ENST00000512683 CCDC102BQ68D86 513 aa15.59■□□□□ 0.09
VEGFA-216ENST00000512683 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.59■□□□□ 0.09
VEGFA-216ENST00000512683 FAM198AQ9UFP1 575 aa15.59■□□□□ 0.09
VEGFA-216ENST00000512683 SRRDQ9UH36 339 aa15.59■□□□□ 0.09
VEGFA-216ENST00000512683 SLC45A1Q9Y2W3 748 aa15.59■□□□□ 0.09
VEGFA-216ENST00000512683 GAKO14976 1311 aa15.59■□□□□ 0.09
VEGFA-216ENST00000512683 ARAP2Q8WZ64 1704 aa15.58■□□□□ 0.08
VEGFA-216ENST00000512683 IPO8O15397 1037 aaKnown RBP15.58■□□□□ 0.08
VEGFA-216ENST00000512683 NFIAQ12857 509 aa15.58■□□□□ 0.08
VEGFA-216ENST00000512683 MTX1Q13505 466 aa15.58■□□□□ 0.08
VEGFA-216ENST00000512683 HABP4Q5JVS0 413 aaKnown RBP15.58■□□□□ 0.08
VEGFA-216ENST00000512683 MIER1Q8N108 512 aa15.58■□□□□ 0.08
VEGFA-216ENST00000512683 PARK7Q99497 189 aaKnown RBP15.58■□□□□ 0.08
VEGFA-216ENST00000512683 SIL1Q9H173 461 aa15.58■□□□□ 0.08
VEGFA-216ENST00000512683 PICK1Q9NRD5 415 aa15.58■□□□□ 0.08
VEGFA-216ENST00000512683 LRRFIP2Q9Y608 721 aaKnown RBP15.58■□□□□ 0.08
VEGFA-216ENST00000512683 PHF20L1A8MW92 1017 aa15.57■□□□□ 0.08
VEGFA-216ENST00000512683 CTNND1O60716 968 aaKnown RBP15.57■□□□□ 0.08
VEGFA-216ENST00000512683 IGSF3O75054 1194 aa15.57■□□□□ 0.08
VEGFA-216ENST00000512683 PSMC4P43686 418 aa15.57■□□□□ 0.08
VEGFA-216ENST00000512683 PHKA1P46020 1223 aa15.57■□□□□ 0.08
VEGFA-216ENST00000512683 RARSP54136 660 aaKnown RBP15.57■□□□□ 0.08
VEGFA-216ENST00000512683 MVPQ14764 893 aaKnown RBP15.57■□□□□ 0.08
VEGFA-216ENST00000512683 SCYL3Q8IZE3 742 aa15.57■□□□□ 0.08
VEGFA-216ENST00000512683 LAMB1P07942 1786 aa15.57■□□□□ 0.08
VEGFA-216ENST00000512683 KIAA0100Q14667 2235 aaKnown RBP15.56■□□□□ 0.08
VEGFA-216ENST00000512683 TBC1D12O60347 775 aa15.56■□□□□ 0.08
VEGFA-216ENST00000512683 FMNL1O95466 1100 aaPredicted RBP15.56■□□□□ 0.08
VEGFA-216ENST00000512683 LDHCP07864 332 aa15.56■□□□□ 0.08
VEGFA-216ENST00000512683 MOGSQ13724 837 aa15.56■□□□□ 0.08
VEGFA-216ENST00000512683 TRIM47Q96LD4 638 aa15.56■□□□□ 0.08
VEGFA-216ENST00000512683 MYH13Q9UKX3 1938 aa15.56■□□□□ 0.08
VEGFA-216ENST00000512683 ADGRA2Q96PE1 1338 aa15.55■□□□□ 0.08
VEGFA-216ENST00000512683 GPR75-ASB3A0A0A6YYF3 556 aa15.55■□□□□ 0.08
VEGFA-216ENST00000512683 PTPRAP18433 802 aa15.55■□□□□ 0.08
VEGFA-216ENST00000512683 GRK4P32298 578 aa15.55■□□□□ 0.08
VEGFA-216ENST00000512683 RGS3P49796 1198 aa15.55■□□□□ 0.08
VEGFA-216ENST00000512683 FCGRTP55899 365 aa15.55■□□□□ 0.08
VEGFA-216ENST00000512683 TIMM10P62072 90 aa15.55■□□□□ 0.08
VEGFA-216ENST00000512683 GSTO1P78417 241 aa15.55■□□□□ 0.08
VEGFA-216ENST00000512683 DIEXFQ68CQ4 756 aaKnown RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms