RNA–Protein interactions for RNA: ENST00000512070.6

TRIO-218, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 8,907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-218ENST00000512070 PAG1Q9NWQ8 432 aa16.19■□□□□ 0.18
TRIO-218ENST00000512070 AGTPBP1Q9UPW5 1226 aa16.19■□□□□ 0.18
TRIO-218ENST00000512070 RABGAP1Q9Y3P9 1069 aa16.19■□□□□ 0.18
TRIO-218ENST00000512070 ISM2Q6H9L7 571 aa16.19■□□□□ 0.18
TRIO-218ENST00000512070 CACYBPQ9HB71 228 aaKnown RBP16.19■□□□□ 0.18
TRIO-218ENST00000512070 C11orf95C9JLR9 678 aaPredicted RBP16.19■□□□□ 0.18
TRIO-218ENST00000512070 DHX32Q7L7V1 743 aaKnown RBP16.19■□□□□ 0.18
TRIO-218ENST00000512070 EXOC7Q9UPT5 735 aa16.19■□□□□ 0.18
TRIO-218ENST00000512070 GEN1Q17RS7 908 aa16.19■□□□□ 0.18
TRIO-218ENST00000512070 F6X3S4 739 aa16.19■□□□□ 0.18
TRIO-218ENST00000512070 CALUO43852 315 aaPredicted RBP16.18■□□□□ 0.18
TRIO-218ENST00000512070 CCDC84Q86UT8 332 aaPredicted RBP16.18■□□□□ 0.18
TRIO-218ENST00000512070 NUTM2BA6NNL0 878 aaPredicted RBP16.18■□□□□ 0.18
TRIO-218ENST00000512070 NUTM2EB1AL46 878 aaPredicted RBP16.18■□□□□ 0.18
TRIO-218ENST00000512070 ZC3H6P61129 1189 aaKnown RBP16.18■□□□□ 0.18
TRIO-218ENST00000512070 SV2BQ7L1I2 683 aa16.18■□□□□ 0.18
TRIO-218ENST00000512070 CCDC25Q86WR0 208 aa16.18■□□□□ 0.18
TRIO-218ENST00000512070 SLC4A4Q9Y6R1 1079 aa16.18■□□□□ 0.18
TRIO-218ENST00000512070 HAND2P61296 217 aa16.18■□□□□ 0.18
TRIO-218ENST00000512070 HAUS8Q9BT25 410 aa16.18■□□□□ 0.18
TRIO-218ENST00000512070 RNF216Q9NWF9 866 aaPredicted RBP16.18■□□□□ 0.18
TRIO-218ENST00000512070 XRCC6P12956 609 aaKnown RBP eCLIP16.18■□□□□ 0.18
TRIO-218ENST00000512070 FAM204AQ9H8W3 233 aa16.18■□□□□ 0.18
TRIO-218ENST00000512070 KIFC2Q96AC6 838 aa16.18■□□□□ 0.18
TRIO-218ENST00000512070 RAB17Q9H0T7 212 aa16.18■□□□□ 0.18
TRIO-218ENST00000512070 GKAP1Q5VSY0 366 aaPredicted RBP16.18■□□□□ 0.18
TRIO-218ENST00000512070 PAK2Q13177 524 aa16.17■□□□□ 0.18
TRIO-218ENST00000512070 DUOX2Q9NRD8 1548 aa16.17■□□□□ 0.18
TRIO-218ENST00000512070 FLOT1O75955 427 aa16.17■□□□□ 0.18
TRIO-218ENST00000512070 NBPF5PQ86XG9 351 aaPredicted RBP16.17■□□□□ 0.18
TRIO-218ENST00000512070 P3H4Q92791 437 aa16.17■□□□□ 0.18
TRIO-218ENST00000512070 AOX1Q06278 1338 aa16.17■□□□□ 0.18
TRIO-218ENST00000512070 DNM1Q05193 864 aaKnown RBP16.17■□□□□ 0.18
TRIO-218ENST00000512070 TMTC1Q8IUR5 882 aa16.17■□□□□ 0.18
TRIO-218ENST00000512070 GOLGA6BA6NDN3 693 aa16.17■□□□□ 0.18
TRIO-218ENST00000512070 CYP7A1P22680 504 aa16.17■□□□□ 0.18
TRIO-218ENST00000512070 HSPA1LP34931 641 aa16.17■□□□□ 0.18
TRIO-218ENST00000512070 RUFY3Q7L099 469 aa16.17■□□□□ 0.18
TRIO-218ENST00000512070 MGEA5O60502 916 aa16.17■□□□□ 0.18
TRIO-218ENST00000512070 EVCP57679 992 aa16.17■□□□□ 0.18
TRIO-218ENST00000512070 CCDC125Q86Z20 511 aa16.17■□□□□ 0.18
TRIO-218ENST00000512070 RNF168Q8IYW5 571 aaPredicted RBP16.17■□□□□ 0.18
TRIO-218ENST00000512070 Q9H521 79 aa16.17■□□□□ 0.18
TRIO-218ENST00000512070 LZTFL1Q9NQ48 299 aa16.17■□□□□ 0.18
TRIO-218ENST00000512070 MBIPQ9NS73 344 aa16.17■□□□□ 0.18
TRIO-218ENST00000512070 FAN1Q9Y2M0 1017 aa16.17■□□□□ 0.18
TRIO-218ENST00000512070 PLB1Q6P1J6 1458 aa16.16■□□□□ 0.18
TRIO-218ENST00000512070 ZNF365Q70YC5 407 aa16.16■□□□□ 0.18
TRIO-218ENST00000512070 CAPZA3Q96KX2 299 aa16.16■□□□□ 0.18
TRIO-218ENST00000512070 IFNKQ9P0W0 207 aa16.16■□□□□ 0.18
TRIO-218ENST00000512070 RNF10Q8N5U6 811 aaKnown RBP16.16■□□□□ 0.18
TRIO-218ENST00000512070 RFC4P35249 363 aa16.16■□□□□ 0.18
TRIO-218ENST00000512070 DHX58Q96C10 678 aa16.16■□□□□ 0.18
TRIO-218ENST00000512070 ARID5AQ03989 594 aa16.16■□□□□ 0.18
TRIO-218ENST00000512070 SLC9C1Q4G0N8 1177 aa16.16■□□□□ 0.18
TRIO-218ENST00000512070 CFAP221Q4G0U5 840 aa16.16■□□□□ 0.18
TRIO-218ENST00000512070 LZTS2Q9BRK4 669 aa16.16■□□□□ 0.18
TRIO-218ENST00000512070 ZKSCAN3Q9BRR0 538 aa16.16■□□□□ 0.18
TRIO-218ENST00000512070 PFDN4Q9NQP4 134 aa16.16■□□□□ 0.18
TRIO-218ENST00000512070 PHF8Q9UPP1 1060 aa16.16■□□□□ 0.18
TRIO-218ENST00000512070 ZNF608Q9ULD9 1512 aaPredicted RBP16.16■□□□□ 0.18
TRIO-218ENST00000512070 GOLGA8QA0A0J9YX86 632 aa16.16■□□□□ 0.18
TRIO-218ENST00000512070 GOLGA8OA6NCC3 632 aa16.16■□□□□ 0.18
TRIO-218ENST00000512070 GOLGA8NF8WBI6 632 aa16.16■□□□□ 0.18
TRIO-218ENST00000512070 MAGEB6P1A0A0J9YX57 407 aa16.16■□□□□ 0.18
TRIO-218ENST00000512070 SPOPO43791 374 aa16.15■□□□□ 0.18
TRIO-218ENST00000512070 THUMPD2Q9BTF0 503 aaKnown RBP16.15■□□□□ 0.18
TRIO-218ENST00000512070 KDM5AP29375 1690 aaKnown RBP16.15■□□□□ 0.18
TRIO-218ENST00000512070 SATB1Q01826 763 aa16.15■□□□□ 0.18
TRIO-218ENST00000512070 LEO1Q8WVC0 666 aaPredicted RBP16.15■□□□□ 0.18
TRIO-218ENST00000512070 ZNF830Q96NB3 372 aaPredicted RBP16.15■□□□□ 0.18
TRIO-218ENST00000512070 C20orf194Q5TEA3 1177 aa16.15■□□□□ 0.18
TRIO-218ENST00000512070 ARHGAP6O43182 974 aa16.15■□□□□ 0.18
TRIO-218ENST00000512070 MARCKSP29966 332 aaPredicted RBP16.15■□□□□ 0.18
TRIO-218ENST00000512070 PPFIA4O75335 1185 aa16.15■□□□□ 0.18
TRIO-218ENST00000512070 LUC7L3O95232 432 aaKnown RBP16.15■□□□□ 0.18
TRIO-218ENST00000512070 BCRP11274 1271 aa16.15■□□□□ 0.18
TRIO-218ENST00000512070 ANKRD2Q9GZV1 360 aa16.15■□□□□ 0.18
TRIO-218ENST00000512070 ZBTB17Q13105 803 aa16.15■□□□□ 0.18
TRIO-218ENST00000512070 MLKLQ8NB16 471 aa16.15■□□□□ 0.18
TRIO-218ENST00000512070 GNA14O95837 355 aa16.14■□□□□ 0.17
TRIO-218ENST00000512070 PRIM1P49642 420 aaKnown RBP16.14■□□□□ 0.17
TRIO-218ENST00000512070 DENND2CQ68D51 928 aa16.14■□□□□ 0.17
TRIO-218ENST00000512070 FNBP1Q96RU3 617 aa16.14■□□□□ 0.17
TRIO-218ENST00000512070 ATP8B2P98198 1209 aa16.14■□□□□ 0.17
TRIO-218ENST00000512070 KSR2Q6VAB6 950 aa16.14■□□□□ 0.17
TRIO-218ENST00000512070 NLRP3Q96P20 1036 aa16.14■□□□□ 0.17
TRIO-218ENST00000512070 RHOXF2BP0C7M4 288 aa16.14■□□□□ 0.17
TRIO-218ENST00000512070 KIF11P52732 1056 aa16.14■□□□□ 0.17
TRIO-218ENST00000512070 TMEM87BQ96K49 555 aa16.14■□□□□ 0.17
TRIO-218ENST00000512070 SETDB2Q96T68 719 aa16.14■□□□□ 0.17
TRIO-218ENST00000512070 RHOXF2Q9BQY4 288 aa16.14■□□□□ 0.17
TRIO-218ENST00000512070 HELLSQ9NRZ9 838 aa16.14■□□□□ 0.17
TRIO-218ENST00000512070 SYNRGQ9UMZ2 1314 aa16.14■□□□□ 0.17
TRIO-218ENST00000512070 WHAMMP3Q1A5X7 153 aa16.14■□□□□ 0.17
TRIO-218ENST00000512070 THEGQ9P2T0 379 aa16.14■□□□□ 0.17
TRIO-218ENST00000512070 TLDC2A0PJX2 215 aa16.13■□□□□ 0.17
TRIO-218ENST00000512070 DNAJC8O75937 253 aaPredicted RBP16.13■□□□□ 0.17
TRIO-218ENST00000512070 TAF12Q16514 161 aa16.13■□□□□ 0.17
TRIO-218ENST00000512070 IGSF22Q8N9C0 903 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms