RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 MYPNQ86TC9 1320 aa24.1■■□□□ 1.45
HMGCS1-206ENST00000511774 ZBTB7BO15156 539 aaPredicted RBP24.1■■□□□ 1.45
HMGCS1-206ENST00000511774 PPATQ06203 517 aa24.1■■□□□ 1.45
HMGCS1-206ENST00000511774 ANKRD23Q86SG2 305 aa24.1■■□□□ 1.45
HMGCS1-206ENST00000511774 RAET1EQ8TD07 263 aa24.1■■□□□ 1.45
HMGCS1-206ENST00000511774 RPAP1Q9BWH6 1393 aaPredicted RBP24.09■■□□□ 1.45
HMGCS1-206ENST00000511774 FMNL1O95466 1100 aaPredicted RBP24.09■■□□□ 1.45
HMGCS1-206ENST00000511774 PRKCZQ05513 592 aa24.09■■□□□ 1.45
HMGCS1-206ENST00000511774 RNF208Q9H0X6 261 aa24.09■■□□□ 1.45
HMGCS1-206ENST00000511774 GABRQQ9UN88 632 aa24.09■■□□□ 1.45
HMGCS1-206ENST00000511774 KCNH4Q9UQ05 1017 aa24.09■■□□□ 1.45
HMGCS1-206ENST00000511774 AK9Q5TCS8 1911 aa24.08■■□□□ 1.45
HMGCS1-206ENST00000511774 EXOSC9Q06265 439 aaKnown RBP24.08■■□□□ 1.45
HMGCS1-206ENST00000511774 LRRC24Q50LG9 513 aa24.08■■□□□ 1.45
HMGCS1-206ENST00000511774 FKBP1CQ5VVH2 108 aa24.08■■□□□ 1.45
HMGCS1-206ENST00000511774 SLC17A8Q8NDX2 589 aa24.08■■□□□ 1.45
HMGCS1-206ENST00000511774 NKX2-3Q8TAU0 364 aa24.08■■□□□ 1.45
HMGCS1-206ENST00000511774 UNC93B1Q9H1C4 597 aa24.08■■□□□ 1.45
HMGCS1-206ENST00000511774 DOCK3Q8IZD9 2030 aa24.07■■□□□ 1.44
HMGCS1-206ENST00000511774 VGLL2Q8N8G2 317 aa24.07■■□□□ 1.44
HMGCS1-206ENST00000511774 U2AF1L4Q8WU68 220 aaKnown RBP24.07■■□□□ 1.44
HMGCS1-206ENST00000511774 LRCH3Q96II8 777 aa24.07■■□□□ 1.44
HMGCS1-206ENST00000511774 ZNF341Q9BYN7 854 aa24.07■■□□□ 1.44
HMGCS1-206ENST00000511774 ZNF112Q9UJU3 913 aa24.07■■□□□ 1.44
HMGCS1-206ENST00000511774 BCRP11274 1271 aa24.06■■□□□ 1.44
HMGCS1-206ENST00000511774 BCAMP50895 628 aa24.06■■□□□ 1.44
HMGCS1-206ENST00000511774 GPAT2Q6NUI2 795 aa24.06■■□□□ 1.44
HMGCS1-206ENST00000511774 HTATIP2Q9BUP3 242 aa24.06■■□□□ 1.44
HMGCS1-206ENST00000511774 MRIQ9BWK5 157 aa24.06■■□□□ 1.44
HMGCS1-206ENST00000511774 FARP2O94887 1054 aaPredicted RBP24.05■■□□□ 1.44
HMGCS1-206ENST00000511774 CYP2C8P10632 490 aa24.05■■□□□ 1.44
HMGCS1-206ENST00000511774 DCAF15Q66K64 600 aa24.05■■□□□ 1.44
HMGCS1-206ENST00000511774 VPS37DQ86XT2 251 aa24.05■■□□□ 1.44
HMGCS1-206ENST00000511774 TBC1D22AQ8WUA7 517 aa24.05■■□□□ 1.44
HMGCS1-206ENST00000511774 C9orf78Q9NZ63 289 aaPredicted RBP24.05■■□□□ 1.44
HMGCS1-206ENST00000511774 TMOD2Q9NZR1 351 aa24.05■■□□□ 1.44
HMGCS1-206ENST00000511774 MROH5Q6ZUA9 1318 aa24.05■■□□□ 1.44
HMGCS1-206ENST00000511774 MYH13Q9UKX3 1938 aa24.04■■□□□ 1.44
HMGCS1-206ENST00000511774 NBPF7P0C2Y1 421 aaPredicted RBP24.04■■□□□ 1.44
HMGCS1-206ENST00000511774 HOXD10P28358 340 aa24.04■■□□□ 1.44
HMGCS1-206ENST00000511774 BIN2Q9UBW5 565 aaPredicted RBP24.04■■□□□ 1.44
HMGCS1-206ENST00000511774 SPINK5Q9NQ38 1064 aaPredicted RBP24.03■■□□□ 1.44
HMGCS1-206ENST00000511774 NR2E3Q9Y5X4 410 aa24.03■■□□□ 1.44
HMGCS1-206ENST00000511774 PTPRFP10586 1907 aa24.02■■□□□ 1.44
HMGCS1-206ENST00000511774 FRAT2O75474 233 aaPredicted RBP24.02■■□□□ 1.44
HMGCS1-206ENST00000511774 ALDH1L1O75891 902 aa24.02■■□□□ 1.44
HMGCS1-206ENST00000511774 TCP10Q12799 353 aa24.02■■□□□ 1.44
HMGCS1-206ENST00000511774 NFIAQ12857 509 aa24.02■■□□□ 1.44
HMGCS1-206ENST00000511774 HHIPL2Q6UWX4 724 aa24.02■■□□□ 1.44
HMGCS1-206ENST00000511774 ANKRD44Q8N8A2 993 aa24.02■■□□□ 1.44
HMGCS1-206ENST00000511774 FAM151AQ8WW52 585 aa24.02■■□□□ 1.44
HMGCS1-206ENST00000511774 HOOK2Q96ED9 719 aa24.02■■□□□ 1.44
HMGCS1-206ENST00000511774 BICC1Q9H694 974 aaKnown RBP24.02■■□□□ 1.44
HMGCS1-206ENST00000511774 SGPL1O95470 568 aa24.01■■□□□ 1.43
HMGCS1-206ENST00000511774 ELNP15502 786 aa24.01■■□□□ 1.43
HMGCS1-206ENST00000511774 METTL24Q5JXM2 366 aa24.01■■□□□ 1.43
HMGCS1-206ENST00000511774 SLC4A10Q6U841 1118 aa24.01■■□□□ 1.43
HMGCS1-206ENST00000511774 KLHDC4Q8TBB5 520 aa24.01■■□□□ 1.43
HMGCS1-206ENST00000511774 STAP2Q9UGK3 403 aa24.01■■□□□ 1.43
HMGCS1-206ENST00000511774 PDE8BO95263 885 aa24■■□□□ 1.43
HMGCS1-206ENST00000511774 FCGRTP55899 365 aa24■■□□□ 1.43
HMGCS1-206ENST00000511774 UBXN2AP68543 259 aa24■■□□□ 1.43
HMGCS1-206ENST00000511774 RABL6Q3YEC7 729 aaPredicted RBP24■■□□□ 1.43
HMGCS1-206ENST00000511774 CAVIN4Q5BKX8 364 aa24■■□□□ 1.43
HMGCS1-206ENST00000511774 NOL9Q5SY16 702 aaKnown RBP24■■□□□ 1.43
HMGCS1-206ENST00000511774 ZFPM1Q8IX07 1006 aa24■■□□□ 1.43
HMGCS1-206ENST00000511774 SLAIN1Q8ND83 568 aa24■■□□□ 1.43
HMGCS1-206ENST00000511774 FAM198AQ9UFP1 575 aa24■■□□□ 1.43
HMGCS1-206ENST00000511774 DAGLAQ9Y4D2 1042 aa24■■□□□ 1.43
HMGCS1-206ENST00000511774 CDC42EP5Q6NZY7 148 aa23.99■■□□□ 1.43
HMGCS1-206ENST00000511774 SRCIN1Q9C0H9 1055 aa23.99■■□□□ 1.43
HMGCS1-206ENST00000511774 SALL2Q9Y467 1007 aaPredicted RBP23.99■■□□□ 1.43
HMGCS1-206ENST00000511774 UTYO14607 1347 aa23.99■■□□□ 1.43
HMGCS1-206ENST00000511774 PHIPQ8WWQ0 1821 aa23.98■■□□□ 1.43
HMGCS1-206ENST00000511774 UNC80Q8N2C7 3258 aa23.98■■□□□ 1.43
HMGCS1-206ENST00000511774 ADCY3O60266 1144 aa23.98■■□□□ 1.43
HMGCS1-206ENST00000511774 FGFR2P21802 821 aa23.98■■□□□ 1.43
HMGCS1-206ENST00000511774 FLT3LGP49771 235 aa23.98■■□□□ 1.43
HMGCS1-206ENST00000511774 DIXDC1Q155Q3 683 aa23.98■■□□□ 1.43
HMGCS1-206ENST00000511774 PARK7Q99497 189 aaKnown RBP23.98■■□□□ 1.43
HMGCS1-206ENST00000511774 SUGT1Q9Y2Z0 365 aa23.98■■□□□ 1.43
HMGCS1-206ENST00000511774 MAST3O60307 1309 aa23.98■■□□□ 1.43
HMGCS1-206ENST00000511774 ATRNL1Q5VV63 1379 aa23.98■■□□□ 1.43
HMGCS1-206ENST00000511774 INHAP05111 366 aa23.97■■□□□ 1.43
HMGCS1-206ENST00000511774 SLURP2P0DP57 97 aa23.97■■□□□ 1.43
HMGCS1-206ENST00000511774 DOCK2Q92608 1830 aa23.97■■□□□ 1.43
HMGCS1-206ENST00000511774 A0A1W2PPC1 479 aa23.96■■□□□ 1.43
HMGCS1-206ENST00000511774 EVI5O60447 810 aa23.96■■□□□ 1.43
HMGCS1-206ENST00000511774 DIS3LQ8TF46 1054 aaKnown RBP23.96■■□□□ 1.43
HMGCS1-206ENST00000511774 DEFB118Q96PH6 123 aa23.96■■□□□ 1.43
HMGCS1-206ENST00000511774 PHF20L1A8MW92 1017 aa23.95■■□□□ 1.42
HMGCS1-206ENST00000511774 CXCL11O14625 94 aa23.95■■□□□ 1.42
HMGCS1-206ENST00000511774 NCBP3Q53F19 620 aaKnown RBP23.95■■□□□ 1.42
HMGCS1-206ENST00000511774 A0A0G2JLL6 359 aaPredicted RBP23.94■■□□□ 1.42
HMGCS1-206ENST00000511774 PRDX5P30044 214 aa23.94■■□□□ 1.42
HMGCS1-206ENST00000511774 PRRT2Q7Z6L0 340 aaPredicted RBP23.94■■□□□ 1.42
HMGCS1-206ENST00000511774 WDR63Q8IWG1 891 aa23.94■■□□□ 1.42
HMGCS1-206ENST00000511774 PAK6Q9NQU5 681 aaPredicted RBP23.94■■□□□ 1.42
HMGCS1-206ENST00000511774 TFRCP02786 760 aaKnown RBP23.93■■□□□ 1.42
HMGCS1-206ENST00000511774 PAWRQ96IZ0 340 aaKnown RBP23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms