RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 GALNT11Q8NCW6 608 aa9.08□□□□□ -0.96
GYPB-212ENST00000511198 WFDC12Q8WWY7 111 aa9.08□□□□□ -0.96
GYPB-212ENST00000511198 PMEPA1Q969W9 287 aa9.08□□□□□ -0.96
GYPB-212ENST00000511198 ADAM19Q9H013 955 aa9.08□□□□□ -0.96
GYPB-212ENST00000511198 A2MP01023 1474 aa9.08□□□□□ -0.96
GYPB-212ENST00000511198 ADGBQ8N7X0 1667 aa9.07□□□□□ -0.96
GYPB-212ENST00000511198 LINC01387J3KSC0 135 aa9.07□□□□□ -0.96
GYPB-212ENST00000511198 EREGO14944 169 aa9.07□□□□□ -0.96
GYPB-212ENST00000511198 NOS3P29474 1203 aa9.07□□□□□ -0.96
GYPB-212ENST00000511198 EHHADHQ08426 723 aa9.07□□□□□ -0.96
GYPB-212ENST00000511198 R3HDM1Q15032 1099 aaKnown RBP9.07□□□□□ -0.96
GYPB-212ENST00000511198 SH2B1Q9NRF2 756 aaPredicted RBP9.07□□□□□ -0.96
GYPB-212ENST00000511198 DZANK1Q9NVP4 752 aa9.07□□□□□ -0.96
GYPB-212ENST00000511198 FOXD3Q9UJU5 478 aaPredicted RBP9.07□□□□□ -0.96
GYPB-212ENST00000511198 MSH6P52701 1360 aa9.07□□□□□ -0.96
GYPB-212ENST00000511198 TIAM1Q13009 1591 aa9.07□□□□□ -0.96
GYPB-212ENST00000511198 PRDM15P57071 1507 aaPredicted RBP9.06□□□□□ -0.96
GYPB-212ENST00000511198 H3BRB1 525 aa9.06□□□□□ -0.96
GYPB-212ENST00000511198 DYRK3O43781 588 aa9.06□□□□□ -0.96
GYPB-212ENST00000511198 TRPA1O75762 1119 aa9.06□□□□□ -0.96
GYPB-212ENST00000511198 EPHA1P21709 976 aa9.06□□□□□ -0.96
GYPB-212ENST00000511198 IREB2P48200 963 aaKnown RBP9.06□□□□□ -0.96
GYPB-212ENST00000511198 TXNDC11Q6PKC3 985 aa9.06□□□□□ -0.96
GYPB-212ENST00000511198 TUT1Q9H6E5 874 aaKnown RBP9.06□□□□□ -0.96
GYPB-212ENST00000511198 SPAG9O60271 1321 aaKnown RBP9.05□□□□□ -0.96
GYPB-212ENST00000511198 PHACTR2O75167 634 aa9.05□□□□□ -0.96
GYPB-212ENST00000511198 ARHGAP4P98171 946 aa9.05□□□□□ -0.96
GYPB-212ENST00000511198 TMEM130Q8N3G9 435 aa9.05□□□□□ -0.96
GYPB-212ENST00000511198 SNX29Q8TEQ0 813 aa9.05□□□□□ -0.96
GYPB-212ENST00000511198 HHIPQ96QV1 700 aa9.05□□□□□ -0.96
GYPB-212ENST00000511198 MRPL18Q9H0U6 180 aaKnown RBP9.05□□□□□ -0.96
GYPB-212ENST00000511198 TRPC5Q9UL62 973 aaPredicted RBP9.05□□□□□ -0.96
GYPB-212ENST00000511198 PTPRAP18433 802 aa9.04□□□□□ -0.96
GYPB-212ENST00000511198 CDC25BP30305 580 aa9.04□□□□□ -0.96
GYPB-212ENST00000511198 MEGF10Q96KG7 1140 aa9.04□□□□□ -0.96
GYPB-212ENST00000511198 RTEL1-TNFRSF6BF6WH68 1400 aa9.04□□□□□ -0.96
GYPB-212ENST00000511198 ATRNO75882 1429 aa9.04□□□□□ -0.96
GYPB-212ENST00000511198 CAMTA1Q9Y6Y1 1673 aa9.04□□□□□ -0.96
GYPB-212ENST00000511198 NCOA2Q15596 1464 aa9.03□□□□□ -0.96
GYPB-212ENST00000511198 F8W735 103 aaPredicted RBP9.03□□□□□ -0.96
GYPB-212ENST00000511198 PDE2AO00408 941 aaPredicted RBP9.03□□□□□ -0.96
GYPB-212ENST00000511198 ALX3O95076 343 aa9.03□□□□□ -0.96
GYPB-212ENST00000511198 H2AFB1P0C5Y9 115 aa9.03□□□□□ -0.96
GYPB-212ENST00000511198 H2AFB2P0C5Z0 115 aa9.03□□□□□ -0.96
GYPB-212ENST00000511198 PDE4CQ08493 712 aa9.03□□□□□ -0.96
GYPB-212ENST00000511198 GLYCTKQ8IVS8 523 aa9.03□□□□□ -0.96
GYPB-212ENST00000511198 TMEM102Q8N9M5 508 aaPredicted RBP9.03□□□□□ -0.96
GYPB-212ENST00000511198 DCAF11Q8TEB1 546 aa9.03□□□□□ -0.96
GYPB-212ENST00000511198 TP53INP1Q96A56 240 aa9.03□□□□□ -0.96
GYPB-212ENST00000511198 AKTIPQ9H8T0 292 aa9.03□□□□□ -0.96
GYPB-212ENST00000511198 KCNK4Q9NYG8 393 aa9.03□□□□□ -0.96
GYPB-212ENST00000511198 KDM5AP29375 1690 aaKnown RBP9.02□□□□□ -0.97
GYPB-212ENST00000511198 FSCN2O14926 492 aa9.02□□□□□ -0.97
GYPB-212ENST00000511198 FOXD4L6Q3SYB3 417 aaPredicted RBP9.02□□□□□ -0.97
GYPB-212ENST00000511198 FOXD4L3Q6VB84 417 aaPredicted RBP9.02□□□□□ -0.97
GYPB-212ENST00000511198 DZIP1LQ8IYY4 767 aaKnown RBP9.02□□□□□ -0.97
GYPB-212ENST00000511198 OSMRQ99650 979 aa9.02□□□□□ -0.97
GYPB-212ENST00000511198 ZKSCAN3Q9BRR0 538 aa9.02□□□□□ -0.97
GYPB-212ENST00000511198 ZFYVE28Q9HCC9 887 aa9.02□□□□□ -0.97
GYPB-212ENST00000511198 ARHGAP23Q9P227 1491 aa9.02□□□□□ -0.97
GYPB-212ENST00000511198 ABCC3O15438 1527 aa9.01□□□□□ -0.97
GYPB-212ENST00000511198 CD68P34810 354 aaPredicted RBP9.01□□□□□ -0.97
GYPB-212ENST00000511198 HNRNPMP52272 730 aaKnown RBP eCLIP9.01□□□□□ -0.97
GYPB-212ENST00000511198 PEAR1Q5VY43 1037 aaPredicted RBP9.01□□□□□ -0.97
GYPB-212ENST00000511198 NXPE3Q969Y0 559 aa9.01□□□□□ -0.97
GYPB-212ENST00000511198 CARD10Q9BWT7 1032 aa9.01□□□□□ -0.97
GYPB-212ENST00000511198 SETD5Q9C0A6 1442 aa9.01□□□□□ -0.97
GYPB-212ENST00000511198 SOX13Q9UN79 622 aa9.01□□□□□ -0.97
GYPB-212ENST00000511198 PRXQ9BXM0 1461 aa9.01□□□□□ -0.97
GYPB-212ENST00000511198 UBR1Q8IWV7 1749 aa9□□□□□ -0.97
GYPB-212ENST00000511198 MAST1Q9Y2H9 1570 aa9□□□□□ -0.97
GYPB-212ENST00000511198 WISP1O95388 367 aa9□□□□□ -0.97
GYPB-212ENST00000511198 EDN3P14138 238 aa9□□□□□ -0.97
GYPB-212ENST00000511198 RANGAP1P46060 587 aaPredicted RBP9□□□□□ -0.97
GYPB-212ENST00000511198 Q6ZS46 218 aa9□□□□□ -0.97
GYPB-212ENST00000511198 BRINP3Q76B58 766 aa9□□□□□ -0.97
GYPB-212ENST00000511198 ZC3HAV1Q7Z2W4 902 aaKnown RBP9□□□□□ -0.97
GYPB-212ENST00000511198 AGGF1Q8N302 714 aaeCLIP9□□□□□ -0.97
GYPB-212ENST00000511198 KLHL23Q8NBE8 558 aa9□□□□□ -0.97
GYPB-212ENST00000511198 SLC26A8Q96RN1 970 aa9□□□□□ -0.97
GYPB-212ENST00000511198 LATS2Q9NRM7 1088 aa9□□□□□ -0.97
GYPB-212ENST00000511198 BRPF3Q9ULD4 1205 aa9□□□□□ -0.97
GYPB-212ENST00000511198 AMOTL2Q9Y2J4 779 aa9□□□□□ -0.97
GYPB-212ENST00000511198 H3BRJ5 948 aa8.99□□□□□ -0.97
GYPB-212ENST00000511198 PRSS36Q5K4E3 855 aa8.99□□□□□ -0.97
GYPB-212ENST00000511198 FAM117BQ6P1L5 589 aa8.99□□□□□ -0.97
GYPB-212ENST00000511198 KLHDC7BQ96G42 594 aa8.99□□□□□ -0.97
GYPB-212ENST00000511198 SLIT1O75093 1534 aa8.99□□□□□ -0.97
GYPB-212ENST00000511198 PNPLA6Q8IY17 1366 aa8.99□□□□□ -0.97
GYPB-212ENST00000511198 ADAM11O75078 769 aa8.98□□□□□ -0.97
GYPB-212ENST00000511198 FAM129BQ96TA1 746 aa8.98□□□□□ -0.97
GYPB-212ENST00000511198 WASHC2CQ9Y4E1 1318 aa8.98□□□□□ -0.97
GYPB-212ENST00000511198 INO80Q9ULG1 1556 aaPredicted RBP8.98□□□□□ -0.97
GYPB-212ENST00000511198 PREX2Q70Z35 1606 aa8.98□□□□□ -0.97
GYPB-212ENST00000511198 NKTRP30414 1462 aaKnown RBP8.97□□□□□ -0.97
GYPB-212ENST00000511198 DDX3YO15523 660 aaKnown RBP8.97□□□□□ -0.97
GYPB-212ENST00000511198 IGHA2P01877 340 aa8.97□□□□□ -0.97
GYPB-212ENST00000511198 POLR3DP05423 398 aaPredicted RBP8.97□□□□□ -0.97
GYPB-212ENST00000511198 VN1R5Q7Z5H4 357 aa8.97□□□□□ -0.97
GYPB-212ENST00000511198 CCER1Q8TC90 406 aaPredicted RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms