RNA–Protein interactions for RNA: ENST00000510710.3

COL1A1-212, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,147 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-212ENST00000510710 WDR66Q8TBY9 1149 aa18.67■□□□□ 0.58
COL1A1-212ENST00000510710 YTHDC1Q96MU7 727 aaKnown RBP18.67■□□□□ 0.58
COL1A1-212ENST00000510710 ZNF341Q9BYN7 854 aa18.67■□□□□ 0.58
COL1A1-212ENST00000510710 ZCCHC17Q9NP64 241 aaKnown RBP18.67■□□□□ 0.58
COL1A1-212ENST00000510710 MYCP01106 439 aaPredicted RBP18.66■□□□□ 0.58
COL1A1-212ENST00000510710 LACTBP83111 547 aaPredicted RBP18.66■□□□□ 0.58
COL1A1-212ENST00000510710 LPIN2Q92539 896 aa18.66■□□□□ 0.58
COL1A1-212ENST00000510710 KIAA0100Q14667 2235 aaKnown RBP18.66■□□□□ 0.58
COL1A1-212ENST00000510710 EYA2O00167 538 aa18.65■□□□□ 0.58
COL1A1-212ENST00000510710 PPATQ06203 517 aa18.65■□□□□ 0.58
COL1A1-212ENST00000510710 SSH1Q8WYL5 1049 aa18.65■□□□□ 0.58
COL1A1-212ENST00000510710 ARHGAP39Q9C0H5 1083 aa18.65■□□□□ 0.58
COL1A1-212ENST00000510710 HTTP42858 3142 aa18.64■□□□□ 0.57
COL1A1-212ENST00000510710 GNRH1P01148 92 aa18.64■□□□□ 0.57
COL1A1-212ENST00000510710 TCP10Q12799 353 aa18.64■□□□□ 0.57
COL1A1-212ENST00000510710 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.64■□□□□ 0.57
COL1A1-212ENST00000510710 FAM151AQ8WW52 585 aa18.64■□□□□ 0.57
COL1A1-212ENST00000510710 RPAP1Q9BWH6 1393 aaPredicted RBP18.64■□□□□ 0.57
COL1A1-212ENST00000510710 E9PSI1 815 aa18.63■□□□□ 0.57
COL1A1-212ENST00000510710 ECM2O94769 699 aaPredicted RBP18.63■□□□□ 0.57
COL1A1-212ENST00000510710 INPP5BP32019 993 aa18.63■□□□□ 0.57
COL1A1-212ENST00000510710 RFX5P48382 616 aaPredicted RBP18.63■□□□□ 0.57
COL1A1-212ENST00000510710 SH3TC2Q8TF17 1288 aa18.63■□□□□ 0.57
COL1A1-212ENST00000510710 CDC42EP5Q6NZY7 148 aa18.62■□□□□ 0.57
COL1A1-212ENST00000510710 GNL3LQ9NVN8 582 aaKnown RBP18.62■□□□□ 0.57
COL1A1-212ENST00000510710 CPA4Q9UI42 421 aa18.62■□□□□ 0.57
COL1A1-212ENST00000510710 DAGLAQ9Y4D2 1042 aa18.62■□□□□ 0.57
COL1A1-212ENST00000510710 CENPFP49454 3210 aa18.62■□□□□ 0.57
COL1A1-212ENST00000510710 AK9Q5TCS8 1911 aa18.61■□□□□ 0.57
COL1A1-212ENST00000510710 MYH13Q9UKX3 1938 aa18.61■□□□□ 0.57
COL1A1-212ENST00000510710 PRMT2P55345 433 aa18.61■□□□□ 0.57
COL1A1-212ENST00000510710 DIXDC1Q155Q3 683 aa18.61■□□□□ 0.57
COL1A1-212ENST00000510710 ANKRD23Q86SG2 305 aa18.61■□□□□ 0.57
COL1A1-212ENST00000510710 PDHXO00330 501 aa18.6■□□□□ 0.57
COL1A1-212ENST00000510710 LDHBP07195 334 aaKnown RBP18.6■□□□□ 0.57
COL1A1-212ENST00000510710 C17orf99Q6UX52 265 aa18.6■□□□□ 0.57
COL1A1-212ENST00000510710 ATG9AQ7Z3C6 839 aa18.6■□□□□ 0.57
COL1A1-212ENST00000510710 SIL1Q9H173 461 aa18.6■□□□□ 0.57
COL1A1-212ENST00000510710 USP40Q9NVE5 1235 aa18.6■□□□□ 0.57
COL1A1-212ENST00000510710 CEP126Q9P2H0 1117 aa18.6■□□□□ 0.57
COL1A1-212ENST00000510710 ZNF112Q9UJU3 913 aa18.6■□□□□ 0.57
COL1A1-212ENST00000510710 MKI67P46013 3256 aaKnown RBP18.6■□□□□ 0.57
COL1A1-212ENST00000510710 ZSWIM8A7E2V4 1837 aa18.59■□□□□ 0.57
COL1A1-212ENST00000510710 HOXD10P28358 340 aa18.59■□□□□ 0.57
COL1A1-212ENST00000510710 PRDX5P30044 214 aa18.59■□□□□ 0.57
COL1A1-212ENST00000510710 PSMC4P43686 418 aa18.59■□□□□ 0.57
COL1A1-212ENST00000510710 NFIAQ12857 509 aa18.59■□□□□ 0.57
COL1A1-212ENST00000510710 ATP2B3Q16720 1220 aa18.59■□□□□ 0.57
COL1A1-212ENST00000510710 ALDH1L2Q3SY69 923 aa18.59■□□□□ 0.57
COL1A1-212ENST00000510710 FBXO3Q9UK99 471 aa18.59■□□□□ 0.57
COL1A1-212ENST00000510710 KCNH4Q9UQ05 1017 aa18.59■□□□□ 0.57
COL1A1-212ENST00000510710 FMNL1O95466 1100 aaPredicted RBP18.58■□□□□ 0.56
COL1A1-212ENST00000510710 UBTFL1P0CB47 393 aaPredicted RBP18.58■□□□□ 0.56
COL1A1-212ENST00000510710 SLFN5Q08AF3 891 aa18.58■□□□□ 0.56
COL1A1-212ENST00000510710 SMC4Q9NTJ3 1288 aa18.58■□□□□ 0.56
COL1A1-212ENST00000510710 SRRDQ9UH36 339 aa18.58■□□□□ 0.56
COL1A1-212ENST00000510710 DENND2AQ9ULE3 1009 aa18.58■□□□□ 0.56
COL1A1-212ENST00000510710 CIAO1O76071 339 aa18.57■□□□□ 0.56
COL1A1-212ENST00000510710 NOL9Q5SY16 702 aaKnown RBP18.57■□□□□ 0.56
COL1A1-212ENST00000510710 TRMT2AQ8IZ69 625 aaKnown RBP18.57■□□□□ 0.56
COL1A1-212ENST00000510710 RAET1EQ8TD07 263 aa18.57■□□□□ 0.56
COL1A1-212ENST00000510710 TRIM47Q96LD4 638 aa18.57■□□□□ 0.56
COL1A1-212ENST00000510710 FAM198AQ9UFP1 575 aa18.57■□□□□ 0.56
COL1A1-212ENST00000510710 CTGFP29279 349 aa18.56■□□□□ 0.56
COL1A1-212ENST00000510710 CDCA7LQ96GN5 454 aa18.56■□□□□ 0.56
COL1A1-212ENST00000510710 BRCA2P51587 3418 aa18.55■□□□□ 0.56
COL1A1-212ENST00000510710 SALL1Q9NSC2 1324 aa18.55■□□□□ 0.56
COL1A1-212ENST00000510710 CXCL11O14625 94 aa18.55■□□□□ 0.56
COL1A1-212ENST00000510710 SEMA3EO15041 775 aa18.55■□□□□ 0.56
COL1A1-212ENST00000510710 OSBPP22059 807 aa18.55■□□□□ 0.56
COL1A1-212ENST00000510710 IL15P40933 162 aaPredicted RBP18.55■□□□□ 0.56
COL1A1-212ENST00000510710 PHKA1P46020 1223 aa18.55■□□□□ 0.56
COL1A1-212ENST00000510710 MTFR1Q15390 333 aa18.55■□□□□ 0.56
COL1A1-212ENST00000510710 ZFPM1Q8IX07 1006 aa18.55■□□□□ 0.56
COL1A1-212ENST00000510710 PARK7Q99497 189 aaKnown RBP18.55■□□□□ 0.56
COL1A1-212ENST00000510710 HDAC5Q9UQL6 1122 aa18.55■□□□□ 0.56
COL1A1-212ENST00000510710 COLQQ9Y215 455 aaPredicted RBP18.55■□□□□ 0.56
COL1A1-212ENST00000510710 MYPNQ86TC9 1320 aa18.54■□□□□ 0.56
COL1A1-212ENST00000510710 GRK4P32298 578 aa18.54■□□□□ 0.56
COL1A1-212ENST00000510710 MOGSQ13724 837 aa18.54■□□□□ 0.56
COL1A1-212ENST00000510710 ZSCAN29Q8IWY8 852 aaPredicted RBP18.54■□□□□ 0.56
COL1A1-212ENST00000510710 ZGPATQ8N5A5 531 aaKnown RBP18.54■□□□□ 0.56
COL1A1-212ENST00000510710 PICK1Q9NRD5 415 aa18.54■□□□□ 0.56
COL1A1-212ENST00000510710 BIN2Q9UBW5 565 aaPredicted RBP18.54■□□□□ 0.56
COL1A1-212ENST00000510710 ADGRA2Q96PE1 1338 aa18.53■□□□□ 0.56
COL1A1-212ENST00000510710 H0YGN5 161 aa18.53■□□□□ 0.56
COL1A1-212ENST00000510710 CYP2C8P10632 490 aa18.53■□□□□ 0.56
COL1A1-212ENST00000510710 RGS3P49796 1198 aa18.53■□□□□ 0.56
COL1A1-212ENST00000510710 FXR1P51114 621 aaKnown RBP eCLIP18.53■□□□□ 0.56
COL1A1-212ENST00000510710 FASTKD5Q7L8L6 764 aaKnown RBP18.53■□□□□ 0.56
COL1A1-212ENST00000510710 NKX2-3Q8TAU0 364 aa18.53■□□□□ 0.56
COL1A1-212ENST00000510710 IDI2Q9BXS1 227 aa18.53■□□□□ 0.56
COL1A1-212ENST00000510710 NOB1Q9ULX3 412 aaKnown RBP18.53■□□□□ 0.56
COL1A1-212ENST00000510710 PA2G4Q9UQ80 394 aaKnown RBP18.53■□□□□ 0.56
COL1A1-212ENST00000510710 LRRFIP2Q9Y608 721 aaKnown RBP18.53■□□□□ 0.56
COL1A1-212ENST00000510710 ZHX2Q9Y6X8 837 aa18.53■□□□□ 0.56
COL1A1-212ENST00000510710 PHF20L1A8MW92 1017 aa18.52■□□□□ 0.56
COL1A1-212ENST00000510710 ENTPD3O75355 529 aa18.52■□□□□ 0.56
COL1A1-212ENST00000510710 FCGRTP55899 365 aa18.52■□□□□ 0.56
COL1A1-212ENST00000510710 CCDC102BQ68D86 513 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms