RNA–Protein interactions for RNA: ENST00000507906.5

USP53-204, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 4

Gene USP53, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-204ENST00000507906 PCSK7Q16549 785 aa5.99□□□□□ -1.45
USP53-204ENST00000507906 PSAPL1Q6NUJ1 521 aa5.99□□□□□ -1.45
USP53-204ENST00000507906 LLGL2Q6P1M3 1020 aa5.99□□□□□ -1.45
USP53-204ENST00000507906 TXNDC11Q6PKC3 985 aa5.99□□□□□ -1.45
USP53-204ENST00000507906 RUFY4Q6ZNE9 571 aa5.99□□□□□ -1.45
USP53-204ENST00000507906 GK5Q6ZS86 529 aa5.99□□□□□ -1.45
USP53-204ENST00000507906 C1orf229Q6ZS94 237 aaPredicted RBP5.99□□□□□ -1.45
USP53-204ENST00000507906 REC114Q7Z4M0 266 aa5.99□□□□□ -1.45
USP53-204ENST00000507906 MICALL1Q8N3F8 863 aa5.99□□□□□ -1.45
USP53-204ENST00000507906 SVOPQ8N4V2 548 aa5.99□□□□□ -1.45
USP53-204ENST00000507906 NUDT8Q8WV74 236 aa5.99□□□□□ -1.45
USP53-204ENST00000507906 CBX8Q9HC52 389 aa5.99□□□□□ -1.45
USP53-204ENST00000507906 SNTG2Q9NY99 539 aa5.99□□□□□ -1.45
USP53-204ENST00000507906 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.99□□□□□ -1.45
USP53-204ENST00000507906 GRIN3BO60391 1043 aa5.98□□□□□ -1.45
USP53-204ENST00000507906 ARAFP10398 606 aa5.98□□□□□ -1.45
USP53-204ENST00000507906 CDC27P30260 824 aa5.98□□□□□ -1.45
USP53-204ENST00000507906 GSK3AP49840 483 aa5.98□□□□□ -1.45
USP53-204ENST00000507906 EIF6P56537 245 aaKnown RBP5.98□□□□□ -1.45
USP53-204ENST00000507906 IKBKEQ14164 716 aa5.98□□□□□ -1.45
USP53-204ENST00000507906 FBXW10Q5XX13 1052 aa5.98□□□□□ -1.45
USP53-204ENST00000507906 C20orf204Q6ZNR8 217 aa5.98□□□□□ -1.45
USP53-204ENST00000507906 C8orf86Q6ZUL3 223 aa5.98□□□□□ -1.45
USP53-204ENST00000507906 LILRB2Q8N423 598 aa5.98□□□□□ -1.45
USP53-204ENST00000507906 MKL1Q969V6 931 aa5.98□□□□□ -1.45
USP53-204ENST00000507906 MRFAP1L1Q96HT8 127 aa5.98□□□□□ -1.45
USP53-204ENST00000507906 SRPK1Q96SB4 655 aaKnown RBP5.98□□□□□ -1.45
USP53-204ENST00000507906 ZC3H12CQ9C0D7 883 aaKnown RBP5.98□□□□□ -1.45
USP53-204ENST00000507906 NRSN2Q9GZP1 204 aa5.98□□□□□ -1.45
USP53-204ENST00000507906 RBSNQ9H1K0 784 aa5.98□□□□□ -1.45
USP53-204ENST00000507906 AVENQ9NQS1 362 aaPredicted RBP5.98□□□□□ -1.45
USP53-204ENST00000507906 ST7Q9NRC1 585 aa5.98□□□□□ -1.45
USP53-204ENST00000507906 SIRPGQ9P1W8 387 aa5.98□□□□□ -1.45
USP53-204ENST00000507906 GGA1Q9UJY5 639 aa5.98□□□□□ -1.45
USP53-204ENST00000507906 ZNRF3Q9ULT6 936 aa5.98□□□□□ -1.45
USP53-204ENST00000507906 PCDHB14Q9Y5E9 798 aa5.98□□□□□ -1.45
USP53-204ENST00000507906 CCDC85CA6NKD9 419 aa5.97□□□□□ -1.45
USP53-204ENST00000507906 GFRA2O00451 464 aa5.97□□□□□ -1.45
USP53-204ENST00000507906 ADH6P28332 368 aa5.97□□□□□ -1.45
USP53-204ENST00000507906 INPP5AQ14642 412 aa5.97□□□□□ -1.45
USP53-204ENST00000507906 NFE2L2Q16236 605 aa5.97□□□□□ -1.45
USP53-204ENST00000507906 CWF19L2Q2TBE0 894 aaKnown RBP5.97□□□□□ -1.45
USP53-204ENST00000507906 MAP1SQ66K74 1059 aaPredicted RBP5.97□□□□□ -1.45
USP53-204ENST00000507906 REXO1Q8N1G1 1221 aaKnown RBP5.97□□□□□ -1.45
USP53-204ENST00000507906 DEPDC7Q96QD5 511 aa5.97□□□□□ -1.45
USP53-204ENST00000507906 TRIM55Q9BYV6 548 aa5.97□□□□□ -1.45
USP53-204ENST00000507906 EHMT1Q9H9B1 1298 aa5.97□□□□□ -1.45
USP53-204ENST00000507906 FRRS1LQ9P0K9 344 aa5.97□□□□□ -1.45
USP53-204ENST00000507906 MSRB2Q9Y3D2 182 aa5.97□□□□□ -1.45
USP53-204ENST00000507906 ELOA3CA0A087WX78 387 aaPredicted RBP5.96□□□□□ -1.46
USP53-204ENST00000507906 ELOA3DA6NLF2 546 aaPredicted RBP5.96□□□□□ -1.46
USP53-204ENST00000507906 PPM1GO15355 546 aaPredicted RBP5.96□□□□□ -1.46
USP53-204ENST00000507906 GSTP1P09211 210 aaKnown RBP5.96□□□□□ -1.46
USP53-204ENST00000507906 ZNF165P49910 485 aa5.96□□□□□ -1.46
USP53-204ENST00000507906 GSTM4Q03013 218 aa5.96□□□□□ -1.46
USP53-204ENST00000507906 ELOA3BQ3SY89 546 aa5.96□□□□□ -1.46
USP53-204ENST00000507906 ZNF385CQ66K41 422 aaPredicted RBP5.96□□□□□ -1.46
USP53-204ENST00000507906 LSRQ86X29 649 aaPredicted RBP5.96□□□□□ -1.46
USP53-204ENST00000507906 IL22RA1Q8N6P7 574 aa5.96□□□□□ -1.46
USP53-204ENST00000507906 ELOA3Q8NG57 546 aa5.96□□□□□ -1.46
USP53-204ENST00000507906 GPBAR1Q8TDU6 330 aa5.96□□□□□ -1.46
USP53-204ENST00000507906 TTC9Q92623 222 aa5.96□□□□□ -1.46
USP53-204ENST00000507906 WDR89Q96FK6 387 aaPredicted RBP5.96□□□□□ -1.46
USP53-204ENST00000507906 GPATCH3Q96I76 525 aa5.96□□□□□ -1.46
USP53-204ENST00000507906 FERD3LQ96RJ6 166 aa5.96□□□□□ -1.46
USP53-204ENST00000507906 CCDC86Q9H6F5 360 aaKnown RBP5.96□□□□□ -1.46
USP53-204ENST00000507906 ADAMTS8Q9UP79 889 aa5.96□□□□□ -1.46
USP53-204ENST00000507906 SAMM50Q9Y512 469 aa5.96□□□□□ -1.46
USP53-204ENST00000507906 CORINQ9Y5Q5 1042 aa5.96□□□□□ -1.46
USP53-204ENST00000507906 H3BRJ5 948 aa5.95□□□□□ -1.46
USP53-204ENST00000507906 LINC01387J3KSC0 135 aa5.95□□□□□ -1.46
USP53-204ENST00000507906 DNAJA2O60884 412 aa5.95□□□□□ -1.46
USP53-204ENST00000507906 ATE1O95260 518 aa5.95□□□□□ -1.46
USP53-204ENST00000507906 DLGAP3O95886 979 aa5.95□□□□□ -1.46
USP53-204ENST00000507906 ALBP02768 609 aa5.95□□□□□ -1.46
USP53-204ENST00000507906 AFF1P51825 1210 aaKnown RBP5.95□□□□□ -1.46
USP53-204ENST00000507906 RPL6Q02878 288 aaKnown RBP5.95□□□□□ -1.46
USP53-204ENST00000507906 LRRC14Q15048 493 aa5.95□□□□□ -1.46
USP53-204ENST00000507906 LRFN4Q6PJG9 635 aa5.95□□□□□ -1.46
USP53-204ENST00000507906 RBBP8NLQ8NC74 664 aaPredicted RBP5.95□□□□□ -1.46
USP53-204ENST00000507906 SLC7A3Q8WY07 619 aa5.95□□□□□ -1.46
USP53-204ENST00000507906 KCNB2Q92953 911 aa5.95□□□□□ -1.46
USP53-204ENST00000507906 DNAJC7Q99615 494 aa5.95□□□□□ -1.46
USP53-204ENST00000507906 IGF1RP08069 1367 aa5.94□□□□□ -1.46
USP53-204ENST00000507906 B2RBV5 119 aa5.94□□□□□ -1.46
USP53-204ENST00000507906 ZNF862O60290 1169 aa5.94□□□□□ -1.46
USP53-204ENST00000507906 RGS9O75916 674 aaPredicted RBP5.94□□□□□ -1.46
USP53-204ENST00000507906 TRIM37O94972 964 aa5.94□□□□□ -1.46
USP53-204ENST00000507906 GDF11O95390 407 aa5.94□□□□□ -1.46
USP53-204ENST00000507906 LMNB1P20700 586 aa5.94□□□□□ -1.46
USP53-204ENST00000507906 RASSF7Q02833 373 aa5.94□□□□□ -1.46
USP53-204ENST00000507906 SUZ12Q15022 739 aaKnown RBP5.94□□□□□ -1.46
USP53-204ENST00000507906 DDR2Q16832 855 aa5.94□□□□□ -1.46
USP53-204ENST00000507906 TMEM151AQ8N4L1 468 aa5.94□□□□□ -1.46
USP53-204ENST00000507906 KLHDC7BQ96G42 594 aa5.94□□□□□ -1.46
USP53-204ENST00000507906 CARD10Q9BWT7 1032 aa5.94□□□□□ -1.46
USP53-204ENST00000507906 EMILIN2Q9BXX0 1053 aa5.94□□□□□ -1.46
USP53-204ENST00000507906 MBIPQ9NS73 344 aa5.94□□□□□ -1.46
USP53-204ENST00000507906 HMGB1P09429 215 aaKnown RBP5.93□□□□□ -1.46
USP53-204ENST00000507906 MAOBP27338 520 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms