RNA–Protein interactions for RNA: ENST00000507485.1

RPS3A-206, Transcript of ribosomal protein S3A, humanhuman

TSL 1 (best)

Gene RPS3A, Length 1,526 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-206ENST00000507485 ECM29Q5VYK3 1845 aa11.48□□□□□ -0.57
RPS3A-206ENST00000507485 ANKRD18BA2A2Z9 1011 aa11.47□□□□□ -0.57
RPS3A-206ENST00000507485 TM4SF4P48230 202 aa11.47□□□□□ -0.57
RPS3A-206ENST00000507485 TTLL12Q14166 644 aaPredicted RBP11.47□□□□□ -0.57
RPS3A-206ENST00000507485 LAPTM4AQ15012 233 aa11.47□□□□□ -0.57
RPS3A-206ENST00000507485 LDLRAD1Q5T700 205 aa11.47□□□□□ -0.57
RPS3A-206ENST00000507485 LMBR1LQ6UX01 489 aa11.47□□□□□ -0.57
RPS3A-206ENST00000507485 C15orf52Q6ZUT6 534 aaKnown RBP11.47□□□□□ -0.57
RPS3A-206ENST00000507485 CTU1Q7Z7A3 348 aaKnown RBP11.47□□□□□ -0.57
RPS3A-206ENST00000507485 MYH16Q9H6N6 1097 aa11.47□□□□□ -0.57
RPS3A-206ENST00000507485 WDR63Q8IWG1 891 aa11.46□□□□□ -0.57
RPS3A-206ENST00000507485 KAZALD1Q96I82 304 aa11.46□□□□□ -0.57
RPS3A-206ENST00000507485 CLMNQ96JQ2 1002 aa11.46□□□□□ -0.57
RPS3A-206ENST00000507485 LAMB1P07942 1786 aa11.46□□□□□ -0.58
RPS3A-206ENST00000507485 F8W031 263 aaPredicted RBP11.45□□□□□ -0.58
RPS3A-206ENST00000507485 IL1R1P14778 569 aa11.45□□□□□ -0.58
RPS3A-206ENST00000507485 KCNJ4P48050 445 aa11.45□□□□□ -0.58
RPS3A-206ENST00000507485 HPS5Q9UPZ3 1129 aa11.45□□□□□ -0.58
RPS3A-206ENST00000507485 CLRN2A0PK11 232 aa11.45□□□□□ -0.58
RPS3A-206ENST00000507485 GPR25O00155 361 aa11.45□□□□□ -0.58
RPS3A-206ENST00000507485 IFIT5Q13325 482 aaKnown RBP11.45□□□□□ -0.58
RPS3A-206ENST00000507485 SPRYD7Q5W111 196 aa11.45□□□□□ -0.58
RPS3A-206ENST00000507485 APOBEC3FQ8IUX4 373 aaKnown RBP11.45□□□□□ -0.58
RPS3A-206ENST00000507485 MTMR14Q8NCE2 650 aa11.45□□□□□ -0.58
RPS3A-206ENST00000507485 PRMT6Q96LA8 375 aaPredicted RBP11.45□□□□□ -0.58
RPS3A-206ENST00000507485 EPAS1Q99814 870 aa11.45□□□□□ -0.58
RPS3A-206ENST00000507485 PUS3Q9BZE2 481 aaKnown RBP11.45□□□□□ -0.58
RPS3A-206ENST00000507485 DEFB129Q9H1M3 183 aa11.45□□□□□ -0.58
RPS3A-206ENST00000507485 ANGEL1Q9UNK9 670 aaKnown RBP11.45□□□□□ -0.58
RPS3A-206ENST00000507485 CHMP3Q9Y3E7 222 aa11.45□□□□□ -0.58
RPS3A-206ENST00000507485 OTOFQ9HC10 1997 aa11.44□□□□□ -0.58
RPS3A-206ENST00000507485 PLIN1O60240 522 aa11.44□□□□□ -0.58
RPS3A-206ENST00000507485 GJA5P36382 358 aa11.44□□□□□ -0.58
RPS3A-206ENST00000507485 DLGAP5Q15398 846 aa11.44□□□□□ -0.58
RPS3A-206ENST00000507485 CFAP100Q494V2 611 aa11.44□□□□□ -0.58
RPS3A-206ENST00000507485 SUCLG2Q96I99 432 aa11.44□□□□□ -0.58
RPS3A-206ENST00000507485 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.44□□□□□ -0.58
RPS3A-206ENST00000507485 HDAC9Q9UKV0 1011 aa11.44□□□□□ -0.58
RPS3A-206ENST00000507485 PDE4DIPQ5VU43 2346 aa11.43□□□□□ -0.58
RPS3A-206ENST00000507485 COL1A1P02452 1464 aaPredicted RBP11.43□□□□□ -0.58
RPS3A-206ENST00000507485 GRM8O00222 908 aa11.43□□□□□ -0.58
RPS3A-206ENST00000507485 IGF2BP3O00425 579 aaKnown RBP eCLIP11.43□□□□□ -0.58
RPS3A-206ENST00000507485 NF2P35240 595 aa11.43□□□□□ -0.58
RPS3A-206ENST00000507485 GRIK5Q16478 980 aa11.43□□□□□ -0.58
RPS3A-206ENST00000507485 MAP3K11Q16584 847 aa11.43□□□□□ -0.58
RPS3A-206ENST00000507485 NBPF12Q5TAG4 269 aaPredicted RBP11.43□□□□□ -0.58
RPS3A-206ENST00000507485 ARMC9Q7Z3E5 817 aa11.43□□□□□ -0.58
RPS3A-206ENST00000507485 CFHR5Q9BXR6 569 aa11.43□□□□□ -0.58
RPS3A-206ENST00000507485 ARAP2Q8WZ64 1704 aa11.43□□□□□ -0.58
RPS3A-206ENST00000507485 NBPF7P0C2Y1 421 aaPredicted RBP11.42□□□□□ -0.58
RPS3A-206ENST00000507485 GYG1P46976 350 aa11.42□□□□□ -0.58
RPS3A-206ENST00000507485 MMP14P50281 582 aa11.42□□□□□ -0.58
RPS3A-206ENST00000507485 CAP1Q01518 475 aa11.42□□□□□ -0.58
RPS3A-206ENST00000507485 C6orf132Q5T0Z8 1188 aa11.42□□□□□ -0.58
RPS3A-206ENST00000507485 LDHAL6AQ6ZMR3 332 aa11.42□□□□□ -0.58
RPS3A-206ENST00000507485 ZNF804AQ7Z570 1209 aa11.42□□□□□ -0.58
RPS3A-206ENST00000507485 FAM205AQ6ZU69 1335 aa11.42□□□□□ -0.58
RPS3A-206ENST00000507485 ZNF521Q96K83 1311 aa11.42□□□□□ -0.58
RPS3A-206ENST00000507485 USP2O75604 605 aaPredicted RBP11.41□□□□□ -0.58
RPS3A-206ENST00000507485 FKBP1AP62942 108 aaKnown RBP11.41□□□□□ -0.58
RPS3A-206ENST00000507485 NOM1Q5C9Z4 860 aaKnown RBP11.41□□□□□ -0.58
RPS3A-206ENST00000507485 TDRD7Q8NHU6 1098 aaKnown RBP11.41□□□□□ -0.58
RPS3A-206ENST00000507485 WNK4Q96J92 1243 aa11.41□□□□□ -0.58
RPS3A-206ENST00000507485 FAM84BQ96KN1 310 aaPredicted RBP11.41□□□□□ -0.58
RPS3A-206ENST00000507485 SEPT9Q9UHD8 586 aaPredicted RBP11.41□□□□□ -0.58
RPS3A-206ENST00000507485 ALDH1L1O75891 902 aa11.4□□□□□ -0.58
RPS3A-206ENST00000507485 SREBF2Q12772 1141 aa11.4□□□□□ -0.58
RPS3A-206ENST00000507485 CCDC57Q2TAC2 916 aa11.4□□□□□ -0.58
RPS3A-206ENST00000507485 SLC4A10Q6U841 1118 aa11.4□□□□□ -0.58
RPS3A-206ENST00000507485 ANKRD44Q8N8A2 993 aa11.4□□□□□ -0.58
RPS3A-206ENST00000507485 VEZTQ9HBM0 779 aa11.4□□□□□ -0.58
RPS3A-206ENST00000507485 CNNM1Q9NRU3 951 aa11.4□□□□□ -0.58
RPS3A-206ENST00000507485 HTTP42858 3142 aa11.4□□□□□ -0.59
RPS3A-206ENST00000507485 TRIM6-TRIM34B2RNG4 842 aa11.4□□□□□ -0.59
RPS3A-206ENST00000507485 RASA3Q14644 834 aa11.4□□□□□ -0.59
RPS3A-206ENST00000507485 LRRC24Q50LG9 513 aa11.4□□□□□ -0.59
RPS3A-206ENST00000507485 FAM9BQ8IZU0 186 aa11.4□□□□□ -0.59
RPS3A-206ENST00000507485 SLC10A4Q96EP9 437 aa11.4□□□□□ -0.59
RPS3A-206ENST00000507485 TEPSINQ96N21 525 aa11.4□□□□□ -0.59
RPS3A-206ENST00000507485 PTPN18Q99952 460 aa11.4□□□□□ -0.59
RPS3A-206ENST00000507485 SRCIN1Q9C0H9 1055 aa11.4□□□□□ -0.59
RPS3A-206ENST00000507485 TDRD3Q9H7E2 651 aaKnown RBP11.4□□□□□ -0.59
RPS3A-206ENST00000507485 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.4□□□□□ -0.59
RPS3A-206ENST00000507485 C9orf78Q9NZ63 289 aaPredicted RBP11.4□□□□□ -0.59
RPS3A-206ENST00000507485 ZNF70Q9UC06 446 aaPredicted RBP11.4□□□□□ -0.59
RPS3A-206ENST00000507485 TSR3Q9UJK0 312 aaKnown RBP11.4□□□□□ -0.59
RPS3A-206ENST00000507485 IQSEC3Q9UPP2 1182 aaPredicted RBP11.4□□□□□ -0.59
RPS3A-206ENST00000507485 RIPOR2Q9Y4F9 1068 aa11.4□□□□□ -0.59
RPS3A-206ENST00000507485 PPP2R3BQ9Y5P8 575 aa11.4□□□□□ -0.59
RPS3A-206ENST00000507485 UTYO14607 1347 aa11.39□□□□□ -0.59
RPS3A-206ENST00000507485 ANP32CO43423 234 aa11.39□□□□□ -0.59
RPS3A-206ENST00000507485 FKTNO75072 461 aa11.39□□□□□ -0.59
RPS3A-206ENST00000507485 MFSD14BQ5SR56 506 aa11.39□□□□□ -0.59
RPS3A-206ENST00000507485 FBXO46Q6PJ61 603 aaPredicted RBP11.39□□□□□ -0.59
RPS3A-206ENST00000507485 KLHDC4Q8TBB5 520 aa11.39□□□□□ -0.59
RPS3A-206ENST00000507485 LRCH3Q96II8 777 aa11.39□□□□□ -0.59
RPS3A-206ENST00000507485 BICC1Q9H694 974 aaKnown RBP11.39□□□□□ -0.59
RPS3A-206ENST00000507485 MANSC4A6NHS7 340 aaPredicted RBP11.38□□□□□ -0.59
RPS3A-206ENST00000507485 ZBTB48P10074 688 aaPredicted RBP11.38□□□□□ -0.59
RPS3A-206ENST00000507485 RBM5P52756 815 aaKnown RBP eCLIP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms