RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 SSH1Q8WYL5 1049 aa26.2■■□□□ 1.78
SQSTM1-210ENST00000506042 LDHBP07195 334 aaKnown RBP26.19■■□□□ 1.78
SQSTM1-210ENST00000506042 HOXD10P28358 340 aa26.19■■□□□ 1.78
SQSTM1-210ENST00000506042 SNCAIPQ9Y6H5 919 aa26.19■■□□□ 1.78
SQSTM1-210ENST00000506042 CIAO1O76071 339 aa26.18■■□□□ 1.78
SQSTM1-210ENST00000506042 FGFR2P21802 821 aa26.18■■□□□ 1.78
SQSTM1-210ENST00000506042 ATP2B3Q16720 1220 aa26.18■■□□□ 1.78
SQSTM1-210ENST00000506042 APOBEC3HQ6NTF7 200 aaKnown RBP26.18■■□□□ 1.78
SQSTM1-210ENST00000506042 FAM43AQ8N2R8 423 aa26.18■■□□□ 1.78
SQSTM1-210ENST00000506042 KLHDC4Q8TBB5 520 aa26.18■■□□□ 1.78
SQSTM1-210ENST00000506042 DENND2AQ9ULE3 1009 aa26.18■■□□□ 1.78
SQSTM1-210ENST00000506042 CNKSR2Q8WXI2 1034 aa26.17■■□□□ 1.78
SQSTM1-210ENST00000506042 AK9Q5TCS8 1911 aa26.16■■□□□ 1.78
SQSTM1-210ENST00000506042 POTEFA5A3E0 1075 aa26.16■■□□□ 1.78
SQSTM1-210ENST00000506042 GRIK5Q16478 980 aa26.16■■□□□ 1.78
SQSTM1-210ENST00000506042 CDAN1Q8IWY9 1227 aa26.16■■□□□ 1.78
SQSTM1-210ENST00000506042 ZKSCAN4Q969J2 545 aaPredicted RBP26.16■■□□□ 1.78
SQSTM1-210ENST00000506042 ZNF333Q96JL9 665 aa26.16■■□□□ 1.78
SQSTM1-210ENST00000506042 API5Q9BZZ5 524 aaKnown RBP26.16■■□□□ 1.78
SQSTM1-210ENST00000506042 IRF6O14896 467 aa26.15■■□□□ 1.78
SQSTM1-210ENST00000506042 IL15P40933 162 aaPredicted RBP26.15■■□□□ 1.78
SQSTM1-210ENST00000506042 LACTBP83111 547 aaPredicted RBP26.15■■□□□ 1.78
SQSTM1-210ENST00000506042 BTBD19C9JJ37 291 aa26.14■■□□□ 1.78
SQSTM1-210ENST00000506042 SLFN5Q08AF3 891 aa26.14■■□□□ 1.78
SQSTM1-210ENST00000506042 ANKRD23Q86SG2 305 aa26.14■■□□□ 1.78
SQSTM1-210ENST00000506042 PTCH2Q9Y6C5 1203 aa26.14■■□□□ 1.78
SQSTM1-210ENST00000506042 SPTY2D1Q68D10 685 aaPredicted RBP26.13■■□□□ 1.77
SQSTM1-210ENST00000506042 SALL1Q9NSC2 1324 aa26.13■■□□□ 1.77
SQSTM1-210ENST00000506042 TCP10Q12799 353 aa26.12■■□□□ 1.77
SQSTM1-210ENST00000506042 MIGA2Q7L4E1 593 aa26.12■■□□□ 1.77
SQSTM1-210ENST00000506042 PARK7Q99497 189 aaKnown RBP26.12■■□□□ 1.77
SQSTM1-210ENST00000506042 SIL1Q9H173 461 aa26.12■■□□□ 1.77
SQSTM1-210ENST00000506042 PICK1Q9NRD5 415 aa26.12■■□□□ 1.77
SQSTM1-210ENST00000506042 DAGLAQ9Y4D2 1042 aa26.12■■□□□ 1.77
SQSTM1-210ENST00000506042 DZIP1Q86YF9 867 aaKnown RBP26.11■■□□□ 1.77
SQSTM1-210ENST00000506042 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.11■■□□□ 1.77
SQSTM1-210ENST00000506042 NKX2-3Q8TAU0 364 aa26.11■■□□□ 1.77
SQSTM1-210ENST00000506042 USP40Q9NVE5 1235 aa26.11■■□□□ 1.77
SQSTM1-210ENST00000506042 AKAP2Q9Y2D5 859 aa26.11■■□□□ 1.77
SQSTM1-210ENST00000506042 EN2P19622 333 aaPredicted RBP26.1■■□□□ 1.77
SQSTM1-210ENST00000506042 RFX5P48382 616 aaPredicted RBP26.1■■□□□ 1.77
SQSTM1-210ENST00000506042 CDC42EP5Q6NZY7 148 aa26.1■■□□□ 1.77
SQSTM1-210ENST00000506042 ZSCAN29Q8IWY8 852 aaPredicted RBP26.1■■□□□ 1.77
SQSTM1-210ENST00000506042 PDHXO00330 501 aa26.09■■□□□ 1.77
SQSTM1-210ENST00000506042 NOL9Q5SY16 702 aaKnown RBP26.09■■□□□ 1.77
SQSTM1-210ENST00000506042 FASTKD5Q7L8L6 764 aaKnown RBP26.09■■□□□ 1.77
SQSTM1-210ENST00000506042 RAET1EQ8TD07 263 aa26.09■■□□□ 1.77
SQSTM1-210ENST00000506042 ENTPD3O75355 529 aa26.08■■□□□ 1.77
SQSTM1-210ENST00000506042 FMNL1O95466 1100 aaPredicted RBP26.08■■□□□ 1.77
SQSTM1-210ENST00000506042 ATG9AQ7Z3C6 839 aa26.08■■□□□ 1.77
SQSTM1-210ENST00000506042 ZNF112Q9UJU3 913 aa26.08■■□□□ 1.77
SQSTM1-210ENST00000506042 KCNH4Q9UQ05 1017 aa26.08■■□□□ 1.77
SQSTM1-210ENST00000506042 CXCL11O14625 94 aa26.07■■□□□ 1.76
SQSTM1-210ENST00000506042 ZBTB22O15209 634 aa26.07■■□□□ 1.76
SQSTM1-210ENST00000506042 GNAI3P08754 354 aa26.07■■□□□ 1.76
SQSTM1-210ENST00000506042 PRDX5P30044 214 aa26.07■■□□□ 1.76
SQSTM1-210ENST00000506042 INPP5BP32019 993 aa26.07■■□□□ 1.76
SQSTM1-210ENST00000506042 DIXDC1Q155Q3 683 aa26.07■■□□□ 1.76
SQSTM1-210ENST00000506042 LRRFIP2Q9Y608 721 aaKnown RBP26.07■■□□□ 1.76
SQSTM1-210ENST00000506042 PSMC4P43686 418 aa26.06■■□□□ 1.76
SQSTM1-210ENST00000506042 MVPQ14764 893 aaKnown RBP26.06■■□□□ 1.76
SQSTM1-210ENST00000506042 TRIM47Q96LD4 638 aa26.06■■□□□ 1.76
SQSTM1-210ENST00000506042 PDS5AQ29RF7 1337 aaKnown RBP26.06■■□□□ 1.76
SQSTM1-210ENST00000506042 FCGRTP55899 365 aa26.05■■□□□ 1.76
SQSTM1-210ENST00000506042 UBXN2AP68543 259 aa26.05■■□□□ 1.76
SQSTM1-210ENST00000506042 HABP4Q5JVS0 413 aaKnown RBP26.05■■□□□ 1.76
SQSTM1-210ENST00000506042 C17orf99Q6UX52 265 aa26.05■■□□□ 1.76
SQSTM1-210ENST00000506042 BIN2Q9UBW5 565 aaPredicted RBP26.05■■□□□ 1.76
SQSTM1-210ENST00000506042 SRRDQ9UH36 339 aa26.05■■□□□ 1.76
SQSTM1-210ENST00000506042 CAPN2P17655 700 aa26.04■■□□□ 1.76
SQSTM1-210ENST00000506042 COPRSQ9NQ92 184 aa26.04■■□□□ 1.76
SQSTM1-210ENST00000506042 ABCF2Q9UG63 623 aa26.04■■□□□ 1.76
SQSTM1-210ENST00000506042 CPA4Q9UI42 421 aa26.04■■□□□ 1.76
SQSTM1-210ENST00000506042 NOB1Q9ULX3 412 aaKnown RBP26.04■■□□□ 1.76
SQSTM1-210ENST00000506042 DOCK2Q92608 1830 aa26.03■■□□□ 1.76
SQSTM1-210ENST00000506042 GSTO1P78417 241 aa26.03■■□□□ 1.76
SQSTM1-210ENST00000506042 GORABQ5T7V8 394 aa26.03■■□□□ 1.76
SQSTM1-210ENST00000506042 SCYL3Q8IZE3 742 aa26.03■■□□□ 1.76
SQSTM1-210ENST00000506042 SH3TC2Q8TF17 1288 aa26.03■■□□□ 1.76
SQSTM1-210ENST00000506042 IDI2Q9BXS1 227 aa26.03■■□□□ 1.76
SQSTM1-210ENST00000506042 IPO8O15397 1037 aaKnown RBP26.02■■□□□ 1.76
SQSTM1-210ENST00000506042 MAP4K4O95819 1239 aaPredicted RBP26.02■■□□□ 1.76
SQSTM1-210ENST00000506042 GRK4P32298 578 aa26.02■■□□□ 1.76
SQSTM1-210ENST00000506042 CCDC102BQ68D86 513 aa26.02■■□□□ 1.76
SQSTM1-210ENST00000506042 KIAA0100Q14667 2235 aaKnown RBP26.02■■□□□ 1.76
SQSTM1-210ENST00000506042 MYCP01106 439 aaPredicted RBP26.01■■□□□ 1.75
SQSTM1-210ENST00000506042 LDHCP07864 332 aa26.01■■□□□ 1.75
SQSTM1-210ENST00000506042 PHKA1P46020 1223 aa26.01■■□□□ 1.75
SQSTM1-210ENST00000506042 RGS3P49796 1198 aa26.01■■□□□ 1.75
SQSTM1-210ENST00000506042 NFIAQ12857 509 aa26.01■■□□□ 1.75
SQSTM1-210ENST00000506042 MYPNQ86TC9 1320 aa26.01■■□□□ 1.75
SQSTM1-210ENST00000506042 NOL10Q9BSC4 688 aaKnown RBP26.01■■□□□ 1.75
SQSTM1-210ENST00000506042 SLC45A1Q9Y2W3 748 aa26.01■■□□□ 1.75
SQSTM1-210ENST00000506042 MYH2Q9UKX2 1941 aa26■■□□□ 1.75
SQSTM1-210ENST00000506042 ERICH6Q7L0X2 663 aa26■■□□□ 1.75
SQSTM1-210ENST00000506042 SMCR8Q8TEV9 937 aaPredicted RBP26■■□□□ 1.75
SQSTM1-210ENST00000506042 ARHGAP45Q92619 1136 aa26■■□□□ 1.75
SQSTM1-210ENST00000506042 HTATIP2Q9BUP3 242 aa26■■□□□ 1.75
SQSTM1-210ENST00000506042 ARHGAP39Q9C0H5 1083 aa26■■□□□ 1.75
SQSTM1-210ENST00000506042 FAM198AQ9UFP1 575 aa26■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 1547.8 ms