RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 SASH1O94885 1247 aa9.22□□□□□ -0.93
VCAN-206ENST00000505615 ZBTB48P10074 688 aaPredicted RBP9.22□□□□□ -0.93
VCAN-206ENST00000505615 SP3Q02447 781 aa9.22□□□□□ -0.93
VCAN-206ENST00000505615 MAP3K11Q16584 847 aa9.22□□□□□ -0.93
VCAN-206ENST00000505615 SLC4A8Q2Y0W8 1093 aa9.22□□□□□ -0.93
VCAN-206ENST00000505615 COPS6Q7L5N1 327 aa9.22□□□□□ -0.93
VCAN-206ENST00000505615 USP17L1Q7RTZ2 530 aa9.22□□□□□ -0.93
VCAN-206ENST00000505615 XAGE3Q8WTP9 111 aa9.22□□□□□ -0.93
VCAN-206ENST00000505615 MXD3Q9BW11 206 aa9.22□□□□□ -0.93
VCAN-206ENST00000505615 GGA1Q9UJY5 639 aa9.22□□□□□ -0.93
VCAN-206ENST00000505615 ANGEL1Q9UNK9 670 aaKnown RBP9.22□□□□□ -0.93
VCAN-206ENST00000505615 ADGRG1Q9Y653 693 aa9.22□□□□□ -0.93
VCAN-206ENST00000505615 RPS8P62241 208 aaKnown RBP9.21□□□□□ -0.94
VCAN-206ENST00000505615 SLC9C1Q4G0N8 1177 aa9.21□□□□□ -0.94
VCAN-206ENST00000505615 UBE2Q1Q7Z7E8 422 aa9.21□□□□□ -0.94
VCAN-206ENST00000505615 ZNF598Q86UK7 904 aaKnown RBP9.21□□□□□ -0.94
VCAN-206ENST00000505615 FAM89AQ96GI7 184 aa9.21□□□□□ -0.94
VCAN-206ENST00000505615 ZBED3Q96IU2 234 aaPredicted RBP9.21□□□□□ -0.94
VCAN-206ENST00000505615 PTPN18Q99952 460 aa9.21□□□□□ -0.94
VCAN-206ENST00000505615 ISCA1Q9BUE6 129 aa9.21□□□□□ -0.94
VCAN-206ENST00000505615 NUDCQ9Y266 331 aa9.21□□□□□ -0.94
VCAN-206ENST00000505615 SPTBN5Q9NRC6 3674 aaKnown RBP9.21□□□□□ -0.94
VCAN-206ENST00000505615 TESPA1A2RU30 521 aaPredicted RBP9.2□□□□□ -0.94
VCAN-206ENST00000505615 WTIPA6NIX2 430 aaPredicted RBP9.2□□□□□ -0.94
VCAN-206ENST00000505615 EIF2S2P20042 333 aaKnown RBP9.2□□□□□ -0.94
VCAN-206ENST00000505615 AIMP1Q12904 312 aaKnown RBP9.2□□□□□ -0.94
VCAN-206ENST00000505615 CNGB1Q14028 1251 aaPredicted RBP9.2□□□□□ -0.94
VCAN-206ENST00000505615 DACT2Q5SW24 774 aa9.2□□□□□ -0.94
VCAN-206ENST00000505615 APOBEC3FQ8IUX4 373 aaKnown RBP9.2□□□□□ -0.94
VCAN-206ENST00000505615 SLC10A4Q96EP9 437 aa9.2□□□□□ -0.94
VCAN-206ENST00000505615 CFAP53Q96M91 514 aa9.2□□□□□ -0.94
VCAN-206ENST00000505615 SEC31BQ9NQW1 1179 aa9.2□□□□□ -0.94
VCAN-206ENST00000505615 MYH3P11055 1940 aa9.2□□□□□ -0.94
VCAN-206ENST00000505615 DGAT1O75907 488 aa9.19□□□□□ -0.94
VCAN-206ENST00000505615 S1PR4O95977 384 aa9.19□□□□□ -0.94
VCAN-206ENST00000505615 MYCP01106 439 aaPredicted RBP9.19□□□□□ -0.94
VCAN-206ENST00000505615 LIAT1Q6ZQX7 453 aa9.19□□□□□ -0.94
VCAN-206ENST00000505615 PODNQ7Z5L7 613 aa9.19□□□□□ -0.94
VCAN-206ENST00000505615 NBPF11Q86T75 865 aa9.19□□□□□ -0.94
VCAN-206ENST00000505615 SH3TC2Q8TF17 1288 aa9.19□□□□□ -0.94
VCAN-206ENST00000505615 ANKIB1Q9P2G1 1089 aa9.19□□□□□ -0.94
VCAN-206ENST00000505615 A0A1W2PPC1 479 aa9.18□□□□□ -0.94
VCAN-206ENST00000505615 IRS4O14654 1257 aaPredicted RBP9.18□□□□□ -0.94
VCAN-206ENST00000505615 ZBTB7BO15156 539 aaPredicted RBP9.18□□□□□ -0.94
VCAN-206ENST00000505615 CFHP08603 1231 aa9.18□□□□□ -0.94
VCAN-206ENST00000505615 XDHP47989 1333 aa9.18□□□□□ -0.94
VCAN-206ENST00000505615 DPF3Q92784 378 aa9.18□□□□□ -0.94
VCAN-206ENST00000505615 COL25A1Q9BXS0 654 aaPredicted RBP9.18□□□□□ -0.94
VCAN-206ENST00000505615 MED23Q9ULK4 1368 aa9.18□□□□□ -0.94
VCAN-206ENST00000505615 PRUNE2Q8WUY3 3088 aa9.17□□□□□ -0.94
VCAN-206ENST00000505615 MYO3BQ8WXR4 1341 aa9.17□□□□□ -0.94
VCAN-206ENST00000505615 RCCD1A6NED2 376 aa9.17□□□□□ -0.94
VCAN-206ENST00000505615 ATP5J2-PTCD1G3V325 749 aa9.17□□□□□ -0.94
VCAN-206ENST00000505615 GDF9O60383 454 aa9.17□□□□□ -0.94
VCAN-206ENST00000505615 ADH1BP00325 375 aa9.17□□□□□ -0.94
VCAN-206ENST00000505615 MTFR1Q15390 333 aa9.17□□□□□ -0.94
VCAN-206ENST00000505615 KMT5BQ4FZB7 885 aa9.17□□□□□ -0.94
VCAN-206ENST00000505615 PKDCCQ504Y2 493 aa9.17□□□□□ -0.94
VCAN-206ENST00000505615 RTL5Q5HYW3 569 aaPredicted RBP9.17□□□□□ -0.94
VCAN-206ENST00000505615 OTUD7BQ6GQQ9 843 aa9.17□□□□□ -0.94
VCAN-206ENST00000505615 PLBD2Q8NHP8 589 aa9.17□□□□□ -0.94
VCAN-206ENST00000505615 KCNV2Q8TDN2 545 aa9.17□□□□□ -0.94
VCAN-206ENST00000505615 PLEKHF1Q96S99 279 aa9.17□□□□□ -0.94
VCAN-206ENST00000505615 ARHGAP39Q9C0H5 1083 aa9.17□□□□□ -0.94
VCAN-206ENST00000505615 DEFB129Q9H1M3 183 aa9.17□□□□□ -0.94
VCAN-206ENST00000505615 TSPYL4Q9UJ04 414 aa9.17□□□□□ -0.94
VCAN-206ENST00000505615 NCOR1O75376 2440 aa9.16□□□□□ -0.94
VCAN-206ENST00000505615 EYSQ5T1H1 3165 aa9.16□□□□□ -0.94
VCAN-206ENST00000505615 UNCXA6NJT0 531 aa9.16□□□□□ -0.94
VCAN-206ENST00000505615 ATP2B4P23634 1241 aa9.16□□□□□ -0.94
VCAN-206ENST00000505615 NFE2L2Q16236 605 aa9.16□□□□□ -0.94
VCAN-206ENST00000505615 ZNF697Q5TEC3 545 aa9.16□□□□□ -0.94
VCAN-206ENST00000505615 STRIP1Q5VSL9 837 aa9.16□□□□□ -0.94
VCAN-206ENST00000505615 OGFOD1Q8N543 542 aa9.16□□□□□ -0.94
VCAN-206ENST00000505615 BRI3BPQ8WY22 251 aa9.16□□□□□ -0.94
VCAN-206ENST00000505615 MGAMO43451 1857 aa9.16□□□□□ -0.94
VCAN-206ENST00000505615 LAMA2P24043 3122 aaKnown RBP9.16□□□□□ -0.94
VCAN-206ENST00000505615 ARAP2Q8WZ64 1704 aa9.16□□□□□ -0.94
VCAN-206ENST00000505615 DOCK3Q8IZD9 2030 aa9.15□□□□□ -0.94
VCAN-206ENST00000505615 A0A1B0GUL6 1792 aa9.15□□□□□ -0.94
VCAN-206ENST00000505615 ZNF804BA4D1E1 1349 aa9.15□□□□□ -0.94
VCAN-206ENST00000505615 AOX1Q06278 1338 aa9.15□□□□□ -0.94
VCAN-206ENST00000505615 PPP1R12BO60237 982 aaPredicted RBP9.15□□□□□ -0.94
VCAN-206ENST00000505615 PPP2R1AP30153 589 aa9.15□□□□□ -0.94
VCAN-206ENST00000505615 MMP14P50281 582 aa9.15□□□□□ -0.94
VCAN-206ENST00000505615 TRIM28Q13263 835 aaKnown RBP9.15□□□□□ -0.94
VCAN-206ENST00000505615 TAF1CQ15572 869 aaPredicted RBP9.15□□□□□ -0.94
VCAN-206ENST00000505615 TMEM132AQ24JP5 1023 aa9.15□□□□□ -0.94
VCAN-206ENST00000505615 PLA2G2CQ5R387 149 aa9.15□□□□□ -0.94
VCAN-206ENST00000505615 CHPF2Q9P2E5 772 aa9.15□□□□□ -0.94
VCAN-206ENST00000505615 CLSPNQ9HAW4 1339 aa9.14□□□□□ -0.95
VCAN-206ENST00000505615 USP2O75604 605 aaPredicted RBP9.14□□□□□ -0.95
VCAN-206ENST00000505615 GJA8P48165 433 aa9.14□□□□□ -0.95
VCAN-206ENST00000505615 LACTBP83111 547 aaPredicted RBP9.14□□□□□ -0.95
VCAN-206ENST00000505615 ARHGEF6Q15052 776 aa9.14□□□□□ -0.95
VCAN-206ENST00000505615 KRT24Q2M2I5 525 aa9.14□□□□□ -0.95
VCAN-206ENST00000505615 NBPF12Q5TAG4 269 aaPredicted RBP9.14□□□□□ -0.95
VCAN-206ENST00000505615 TXNRD3Q86VQ6 643 aa9.14□□□□□ -0.95
VCAN-206ENST00000505615 KIAA0825Q8IV33 1275 aa9.14□□□□□ -0.95
VCAN-206ENST00000505615 FAM43AQ8N2R8 423 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms