RNA–Protein interactions for RNA: ENST00000505397.1

LIN54-204, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIN54, Length 2,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-204ENST00000505397 DHX40Q8IX18 779 aaKnown RBP19.74■□□□□ 0.75
LIN54-204ENST00000505397 ZNF512BQ96KM6 892 aaPredicted RBP19.74■□□□□ 0.75
LIN54-204ENST00000505397 KINO60870 393 aaKnown RBP19.73■□□□□ 0.75
LIN54-204ENST00000505397 UQCRFS1P1P0C7P4 283 aa19.73■□□□□ 0.75
LIN54-204ENST00000505397 ADALQ6DHV7 355 aa19.73■□□□□ 0.75
LIN54-204ENST00000505397 NBPF5PQ86XG9 351 aaPredicted RBP19.73■□□□□ 0.75
LIN54-204ENST00000505397 FMR1NBQ8N0W7 255 aaPredicted RBP19.73■□□□□ 0.75
LIN54-204ENST00000505397 PCDHA7Q9UN72 937 aa19.73■□□□□ 0.75
LIN54-204ENST00000505397 A0A1W2PQ27 194 aa19.73■□□□□ 0.75
LIN54-204ENST00000505397 A0A1W2PQ64 194 aa19.73■□□□□ 0.75
LIN54-204ENST00000505397 A0A1W2PQD8 194 aa19.73■□□□□ 0.75
LIN54-204ENST00000505397 RFC4P35249 363 aa19.73■□□□□ 0.75
LIN54-204ENST00000505397 KRT27Q7Z3Y8 459 aa19.73■□□□□ 0.75
LIN54-204ENST00000505397 MB21D2Q8IYB1 491 aaPredicted RBP19.73■□□□□ 0.75
LIN54-204ENST00000505397 ARHGEF1Q92888 912 aaKnown RBP19.73■□□□□ 0.75
LIN54-204ENST00000505397 ANO10Q9NW15 660 aa19.73■□□□□ 0.75
LIN54-204ENST00000505397 MCAMP43121 646 aa19.72■□□□□ 0.75
LIN54-204ENST00000505397 CCDC102BQ68D86 513 aa19.72■□□□□ 0.75
LIN54-204ENST00000505397 FSIP1Q8NA03 581 aa19.72■□□□□ 0.75
LIN54-204ENST00000505397 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.72■□□□□ 0.75
LIN54-204ENST00000505397 FGFR2P21802 821 aa19.72■□□□□ 0.75
LIN54-204ENST00000505397 ME1P48163 572 aa19.72■□□□□ 0.75
LIN54-204ENST00000505397 GUCY1B3Q02153 619 aa19.72■□□□□ 0.75
LIN54-204ENST00000505397 TTF1Q15361 905 aaPredicted RBP19.72■□□□□ 0.75
LIN54-204ENST00000505397 IMMTQ16891 758 aaKnown RBP19.72■□□□□ 0.75
LIN54-204ENST00000505397 TRAPPC3LQ5T215 181 aa19.72■□□□□ 0.75
LIN54-204ENST00000505397 ANKRD7Q92527 254 aa19.72■□□□□ 0.75
LIN54-204ENST00000505397 GPHNQ9NQX3 736 aaPredicted RBP19.72■□□□□ 0.75
LIN54-204ENST00000505397 HPS5Q9UPZ3 1129 aa19.72■□□□□ 0.75
LIN54-204ENST00000505397 FGAP02671 866 aa19.71■□□□□ 0.75
LIN54-204ENST00000505397 SF3B3Q15393 1217 aaKnown RBP19.71■□□□□ 0.75
LIN54-204ENST00000505397 WASHC4Q2M389 1173 aa19.71■□□□□ 0.75
LIN54-204ENST00000505397 PI16Q6UXB8 463 aa19.71■□□□□ 0.75
LIN54-204ENST00000505397 ANKRD18AQ8IVF6 992 aa19.71■□□□□ 0.75
LIN54-204ENST00000505397 LRRC8AQ8IWT6 810 aa19.71■□□□□ 0.75
LIN54-204ENST00000505397 NPHP1O15259 732 aa19.71■□□□□ 0.75
LIN54-204ENST00000505397 RBM6P78332 1123 aaKnown RBP19.71■□□□□ 0.75
LIN54-204ENST00000505397 LINC00301Q8NCQ3 95 aa19.71■□□□□ 0.75
LIN54-204ENST00000505397 RGS22Q8NE09 1264 aa19.71■□□□□ 0.75
LIN54-204ENST00000505397 MRPS27Q92552 414 aaKnown RBP19.71■□□□□ 0.75
LIN54-204ENST00000505397 NEMFO60524 1076 aa19.7■□□□□ 0.74
LIN54-204ENST00000505397 PHKA1P46020 1223 aa19.7■□□□□ 0.74
LIN54-204ENST00000505397 APPBP2Q92624 585 aa19.7■□□□□ 0.74
LIN54-204ENST00000505397 NAP1L2Q9ULW6 460 aaPredicted RBP19.7■□□□□ 0.74
LIN54-204ENST00000505397 WDR19Q8NEZ3 1342 aa19.7■□□□□ 0.74
LIN54-204ENST00000505397 PPFIA3O75145 1194 aa19.7■□□□□ 0.74
LIN54-204ENST00000505397 ARID4AP29374 1257 aaPredicted RBP19.7■□□□□ 0.74
LIN54-204ENST00000505397 TPTE2Q6XPS3 522 aa19.7■□□□□ 0.74
LIN54-204ENST00000505397 POLR3EQ9NVU0 708 aa19.7■□□□□ 0.74
LIN54-204ENST00000505397 ANTXR2P58335 489 aa19.69■□□□□ 0.74
LIN54-204ENST00000505397 FBXO18Q8NFZ0 1043 aa19.69■□□□□ 0.74
LIN54-204ENST00000505397 PRC1O43663 620 aa19.69■□□□□ 0.74
LIN54-204ENST00000505397 DHX16O60231 1041 aaKnown RBP19.69■□□□□ 0.74
LIN54-204ENST00000505397 CHRNDQ07001 517 aa19.69■□□□□ 0.74
LIN54-204ENST00000505397 SLC10A5Q5PT55 438 aa19.69■□□□□ 0.74
LIN54-204ENST00000505397 AMIGO3Q86WK7 504 aa19.69■□□□□ 0.74
LIN54-204ENST00000505397 NLRP3Q96P20 1036 aa19.69■□□□□ 0.74
LIN54-204ENST00000505397 PUS7LQ9H0K6 701 aaKnown RBP19.69■□□□□ 0.74
LIN54-204ENST00000505397 NEDD4P46934 1319 aa19.69■□□□□ 0.74
LIN54-204ENST00000505397 SMTNL1A8MU46 457 aa19.68■□□□□ 0.74
LIN54-204ENST00000505397 YEATS4O95619 227 aa19.68■□□□□ 0.74
LIN54-204ENST00000505397 TAF1P21675 1872 aa19.68■□□□□ 0.74
LIN54-204ENST00000505397 ADRA2BP18089 450 aa19.68■□□□□ 0.74
LIN54-204ENST00000505397 SYCP1Q15431 976 aa19.68■□□□□ 0.74
LIN54-204ENST00000505397 C3orf67Q6ZVT6 689 aa19.68■□□□□ 0.74
LIN54-204ENST00000505397 LRRC4BQ9NT99 713 aa19.68■□□□□ 0.74
LIN54-204ENST00000505397 BECN2A8MW95 431 aa19.67■□□□□ 0.74
LIN54-204ENST00000505397 HAND2P61296 217 aa19.67■□□□□ 0.74
LIN54-204ENST00000505397 BRAPQ7Z569 592 aa19.67■□□□□ 0.74
LIN54-204ENST00000505397 CEP57L1Q8IYX8 460 aa19.67■□□□□ 0.74
LIN54-204ENST00000505397 NCOA7Q8NI08 942 aa19.67■□□□□ 0.74
LIN54-204ENST00000505397 KCNG4Q8TDN1 519 aa19.67■□□□□ 0.74
LIN54-204ENST00000505397 C8orf76Q96K31 380 aa19.67■□□□□ 0.74
LIN54-204ENST00000505397 C16orf45Q96MC5 204 aaPredicted RBP19.67■□□□□ 0.74
LIN54-204ENST00000505397 CLIC4Q9Y696 253 aa19.67■□□□□ 0.74
LIN54-204ENST00000505397 KLF18A0A0U1RQI7 1052 aa19.67■□□□□ 0.74
LIN54-204ENST00000505397 TRIM37O94972 964 aa19.67■□□□□ 0.74
LIN54-204ENST00000505397 TNNT1P13805 278 aa19.67■□□□□ 0.74
LIN54-204ENST00000505397 SLC27A3Q5K4L6 730 aa19.67■□□□□ 0.74
LIN54-204ENST00000505397 PAXBP1Q9Y5B6 917 aa19.67■□□□□ 0.74
LIN54-204ENST00000505397 UBR3Q6ZT12 1888 aa19.67■□□□□ 0.74
LIN54-204ENST00000505397 A0A1B0GUL6 1792 aa19.67■□□□□ 0.74
LIN54-204ENST00000505397 EP400Q96L91 3159 aa19.67■□□□□ 0.74
LIN54-204ENST00000505397 MYO5AQ9Y4I1 1855 aaKnown RBP19.67■□□□□ 0.74
LIN54-204ENST00000505397 NDUFA8P51970 172 aa19.67■□□□□ 0.74
LIN54-204ENST00000505397 OTUD7BQ6GQQ9 843 aa19.67■□□□□ 0.74
LIN54-204ENST00000505397 BPIFA3Q9BQP9 254 aa19.67■□□□□ 0.74
LIN54-204ENST00000505397 A0A087WWV3 80 aa19.66■□□□□ 0.74
LIN54-204ENST00000505397 IDH1O75874 414 aaKnown RBP19.66■□□□□ 0.74
LIN54-204ENST00000505397 MYSM1Q5VVJ2 828 aa19.66■□□□□ 0.74
LIN54-204ENST00000505397 SMAP1Q8IYB5 467 aaPredicted RBP19.66■□□□□ 0.74
LIN54-204ENST00000505397 NAT10Q9H0A0 1025 aaKnown RBP19.66■□□□□ 0.74
LIN54-204ENST00000505397 A0A1B0GVL5 298 aa19.66■□□□□ 0.74
LIN54-204ENST00000505397 SNAP23O00161 211 aa19.66■□□□□ 0.74
LIN54-204ENST00000505397 ZNF772Q68DY9 489 aaPredicted RBP19.66■□□□□ 0.74
LIN54-204ENST00000505397 KCND1Q9NSA2 647 aa19.66■□□□□ 0.74
LIN54-204ENST00000505397 BSDC1Q9NW68 430 aaPredicted RBP19.66■□□□□ 0.74
LIN54-204ENST00000505397 KIAA1468Q9P260 1216 aa19.66■□□□□ 0.74
LIN54-204ENST00000505397 ORC3Q9UBD5 711 aaPredicted RBP19.66■□□□□ 0.74
LIN54-204ENST00000505397 GOLGA8BA8MQT2 603 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms