RNA–Protein interactions for RNA: ENST00000504526.1

TRAPPC11-203, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-203ENST00000504526 CACNB3P54284 484 aa25.97■■□□□ 1.75
TRAPPC11-203ENST00000504526 EAF2Q96CJ1 260 aaPredicted RBP25.97■■□□□ 1.75
TRAPPC11-203ENST00000504526 KIF1BPQ96EK5 621 aa25.97■■□□□ 1.75
TRAPPC11-203ENST00000504526 ZIC5Q96T25 663 aa25.97■■□□□ 1.75
TRAPPC11-203ENST00000504526 TMEM39BQ9GZU3 492 aa25.97■■□□□ 1.75
TRAPPC11-203ENST00000504526 PRDM10Q9NQV6 1147 aa25.97■■□□□ 1.75
TRAPPC11-203ENST00000504526 DBNLQ9UJU6 430 aaKnown RBP25.97■■□□□ 1.75
TRAPPC11-203ENST00000504526 IGSF3O75054 1194 aa25.96■■□□□ 1.75
TRAPPC11-203ENST00000504526 GSTO1P78417 241 aa25.96■■□□□ 1.75
TRAPPC11-203ENST00000504526 CDC42EP5Q6NZY7 148 aa25.96■■□□□ 1.75
TRAPPC11-203ENST00000504526 PI16Q6UXB8 463 aa25.96■■□□□ 1.75
TRAPPC11-203ENST00000504526 RHPN1Q8TCX5 695 aa25.96■■□□□ 1.75
TRAPPC11-203ENST00000504526 RPAP1Q9BWH6 1393 aaPredicted RBP25.95■■□□□ 1.75
TRAPPC11-203ENST00000504526 RAB11FIP3O75154 756 aa25.95■■□□□ 1.74
TRAPPC11-203ENST00000504526 CCDC8Q9H0W5 538 aaPredicted RBP25.95■■□□□ 1.74
TRAPPC11-203ENST00000504526 USP40Q9NVE5 1235 aa25.95■■□□□ 1.74
TRAPPC11-203ENST00000504526 USP2O75604 605 aaPredicted RBP25.94■■□□□ 1.74
TRAPPC11-203ENST00000504526 LDHCP07864 332 aa25.94■■□□□ 1.74
TRAPPC11-203ENST00000504526 HSPA8P11142 646 aaKnown RBP25.94■■□□□ 1.74
TRAPPC11-203ENST00000504526 RRP1P56182 461 aaKnown RBP25.94■■□□□ 1.74
TRAPPC11-203ENST00000504526 MECOMQ03112 1051 aa25.94■■□□□ 1.74
TRAPPC11-203ENST00000504526 AACSQ86V21 672 aa25.94■■□□□ 1.74
TRAPPC11-203ENST00000504526 CLASRPQ8N2M8 674 aaKnown RBP25.94■■□□□ 1.74
TRAPPC11-203ENST00000504526 FAM151AQ8WW52 585 aa25.94■■□□□ 1.74
TRAPPC11-203ENST00000504526 MROH7-TTC4A0A0A0MT08 1334 aa25.93■■□□□ 1.74
TRAPPC11-203ENST00000504526 LBX1P52954 281 aa25.93■■□□□ 1.74
TRAPPC11-203ENST00000504526 ANKRD13AQ8IZ07 590 aa25.93■■□□□ 1.74
TRAPPC11-203ENST00000504526 SLC10A4Q96EP9 437 aa25.93■■□□□ 1.74
TRAPPC11-203ENST00000504526 TLR7Q9NYK1 1049 aaKnown RBP25.93■■□□□ 1.74
TRAPPC11-203ENST00000504526 RAI14Q9P0K7 980 aa25.93■■□□□ 1.74
TRAPPC11-203ENST00000504526 LRP2BPQ9P2M1 347 aa25.93■■□□□ 1.74
TRAPPC11-203ENST00000504526 FZD1Q9UP38 647 aa25.93■■□□□ 1.74
TRAPPC11-203ENST00000504526 COL13A1Q5TAT6 717 aaPredicted RBP25.92■■□□□ 1.74
TRAPPC11-203ENST00000504526 TBC1D9Q6ZT07 1266 aa25.92■■□□□ 1.74
TRAPPC11-203ENST00000504526 CSRNP1Q96S65 589 aa25.92■■□□□ 1.74
TRAPPC11-203ENST00000504526 CDAN1Q8IWY9 1227 aa25.91■■□□□ 1.74
TRAPPC11-203ENST00000504526 NSUN4Q96CB9 384 aaKnown RBP25.91■■□□□ 1.74
TRAPPC11-203ENST00000504526 IL1RAPL2Q9NP60 686 aa25.91■■□□□ 1.74
TRAPPC11-203ENST00000504526 SNRKQ9NRH2 765 aa25.91■■□□□ 1.74
TRAPPC11-203ENST00000504526 SAGE1Q9NXZ1 904 aa25.91■■□□□ 1.74
TRAPPC11-203ENST00000504526 MYH2Q9UKX2 1941 aa25.9■■□□□ 1.74
TRAPPC11-203ENST00000504526 GPR75-ASB3A0A0A6YYF3 556 aa25.9■■□□□ 1.74
TRAPPC11-203ENST00000504526 MAP4K4O95819 1239 aaPredicted RBP25.9■■□□□ 1.74
TRAPPC11-203ENST00000504526 BTDP43251 543 aa25.9■■□□□ 1.74
TRAPPC11-203ENST00000504526 IDI2Q9BXS1 227 aa25.9■■□□□ 1.74
TRAPPC11-203ENST00000504526 ZBTB48P10074 688 aaPredicted RBP25.89■■□□□ 1.74
TRAPPC11-203ENST00000504526 SPRYD7Q5W111 196 aa25.89■■□□□ 1.74
TRAPPC11-203ENST00000504526 DCAF15Q66K64 600 aa25.89■■□□□ 1.74
TRAPPC11-203ENST00000504526 APBB1O00213 710 aa25.88■■□□□ 1.73
TRAPPC11-203ENST00000504526 ENTPD3O75355 529 aa25.88■■□□□ 1.73
TRAPPC11-203ENST00000504526 CYP2E1P05181 493 aaPredicted RBP25.88■■□□□ 1.73
TRAPPC11-203ENST00000504526 ZAP70P43403 619 aa25.88■■□□□ 1.73
TRAPPC11-203ENST00000504526 SREBF2Q12772 1141 aa25.88■■□□□ 1.73
TRAPPC11-203ENST00000504526 NFIAQ12857 509 aa25.88■■□□□ 1.73
TRAPPC11-203ENST00000504526 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.88■■□□□ 1.73
TRAPPC11-203ENST00000504526 ZNF384Q8TF68 577 aa25.88■■□□□ 1.73
TRAPPC11-203ENST00000504526 CLMNQ96JQ2 1002 aa25.88■■□□□ 1.73
TRAPPC11-203ENST00000504526 FAM198AQ9UFP1 575 aa25.88■■□□□ 1.73
TRAPPC11-203ENST00000504526 IFIT2P09913 472 aaKnown RBP25.87■■□□□ 1.73
TRAPPC11-203ENST00000504526 MAP3K9P80192 1104 aa25.87■■□□□ 1.73
TRAPPC11-203ENST00000504526 TCP10Q12799 353 aa25.87■■□□□ 1.73
TRAPPC11-203ENST00000504526 RFX7Q2KHR2 1363 aa25.86■■□□□ 1.73
TRAPPC11-203ENST00000504526 TM4SF4P48230 202 aa25.86■■□□□ 1.73
TRAPPC11-203ENST00000504526 NAA16Q6N069 864 aaPredicted RBP25.86■■□□□ 1.73
TRAPPC11-203ENST00000504526 WNK4Q96J92 1243 aa25.86■■□□□ 1.73
TRAPPC11-203ENST00000504526 NOL10Q9BSC4 688 aaKnown RBP25.86■■□□□ 1.73
TRAPPC11-203ENST00000504526 CSADQ9Y600 493 aa25.86■■□□□ 1.73
TRAPPC11-203ENST00000504526 AKAP11Q9UKA4 1901 aa25.86■■□□□ 1.73
TRAPPC11-203ENST00000504526 MANSC4A6NHS7 340 aaPredicted RBP25.85■■□□□ 1.73
TRAPPC11-203ENST00000504526 NPM3O75607 178 aaKnown RBP25.85■■□□□ 1.73
TRAPPC11-203ENST00000504526 RGS3P49796 1198 aa25.85■■□□□ 1.73
TRAPPC11-203ENST00000504526 INHBEP58166 350 aa25.85■■□□□ 1.73
TRAPPC11-203ENST00000504526 MKRN3Q13064 507 aaKnown RBP25.85■■□□□ 1.73
TRAPPC11-203ENST00000504526 ZNF341Q9BYN7 854 aa25.85■■□□□ 1.73
TRAPPC11-203ENST00000504526 RNF186Q9NXI6 227 aa25.85■■□□□ 1.73
TRAPPC11-203ENST00000504526 WDHD1O75717 1129 aaPredicted RBP25.84■■□□□ 1.73
TRAPPC11-203ENST00000504526 BAG3O95817 575 aa25.84■■□□□ 1.73
TRAPPC11-203ENST00000504526 RHBDL3P58872 404 aa25.84■■□□□ 1.73
TRAPPC11-203ENST00000504526 TMED8Q6PL24 325 aaPredicted RBP25.84■■□□□ 1.73
TRAPPC11-203ENST00000504526 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.84■■□□□ 1.73
TRAPPC11-203ENST00000504526 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.84■■□□□ 1.73
TRAPPC11-203ENST00000504526 TSKSQ9UJT2 592 aa25.84■■□□□ 1.73
TRAPPC11-203ENST00000504526 TRPA1O75762 1119 aa25.83■■□□□ 1.73
TRAPPC11-203ENST00000504526 TNS4Q8IZW8 715 aa25.83■■□□□ 1.73
TRAPPC11-203ENST00000504526 WRNIP1Q96S55 665 aa25.83■■□□□ 1.73
TRAPPC11-203ENST00000504526 LRRCC1Q9C099 1032 aa25.83■■□□□ 1.73
TRAPPC11-203ENST00000504526 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.83■■□□□ 1.73
TRAPPC11-203ENST00000504526 MAST2Q6P0Q8 1798 aa25.82■■□□□ 1.72
TRAPPC11-203ENST00000504526 PLCG2P16885 1265 aa25.82■■□□□ 1.72
TRAPPC11-203ENST00000504526 VGLL4Q14135 290 aa25.82■■□□□ 1.72
TRAPPC11-203ENST00000504526 ELP3Q9H9T3 547 aa25.82■■□□□ 1.72
TRAPPC11-203ENST00000504526 PIH1D3Q9NQM4 214 aaKnown RBP25.82■■□□□ 1.72
TRAPPC11-203ENST00000504526 TTF1Q15361 905 aaPredicted RBP25.81■■□□□ 1.72
TRAPPC11-203ENST00000504526 OTOFQ9HC10 1997 aa25.8■■□□□ 1.72
TRAPPC11-203ENST00000504526 MAP3K12Q12852 859 aa25.8■■□□□ 1.72
TRAPPC11-203ENST00000504526 MIGA2Q7L4E1 593 aa25.8■■□□□ 1.72
TRAPPC11-203ENST00000504526 ZSCAN29Q8IWY8 852 aaPredicted RBP25.8■■□□□ 1.72
TRAPPC11-203ENST00000504526 ZFPM1Q8IX07 1006 aa25.8■■□□□ 1.72
TRAPPC11-203ENST00000504526 OPTNQ96CV9 577 aa25.8■■□□□ 1.72
TRAPPC11-203ENST00000504526 DCTPP1Q9H773 170 aa25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms