RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 FAM84BQ96KN1 310 aaPredicted RBP20.1■□□□□ 0.81
PDLIM7-210ENST00000503827 ZNF341Q9BYN7 854 aa20.1■□□□□ 0.81
PDLIM7-210ENST00000503827 UNC93B1Q9H1C4 597 aa20.1■□□□□ 0.81
PDLIM7-210ENST00000503827 TSR2Q969E8 191 aaKnown RBP20.09■□□□□ 0.81
PDLIM7-210ENST00000503827 ALPK3Q96L96 1907 aa20.08■□□□□ 0.81
PDLIM7-210ENST00000503827 TFRCP02786 760 aaKnown RBP20.08■□□□□ 0.81
PDLIM7-210ENST00000503827 FKBP1CQ5VVH2 108 aa20.08■□□□□ 0.81
PDLIM7-210ENST00000503827 GPR153Q6NV75 609 aa20.08■□□□□ 0.81
PDLIM7-210ENST00000503827 TBC1D22AQ8WUA7 517 aa20.08■□□□□ 0.81
PDLIM7-210ENST00000503827 GRIK5Q16478 980 aa20.07■□□□□ 0.8
PDLIM7-210ENST00000503827 VPS37DQ86XT2 251 aa20.07■□□□□ 0.8
PDLIM7-210ENST00000503827 PARK7Q99497 189 aaKnown RBP20.07■□□□□ 0.8
PDLIM7-210ENST00000503827 KCNH4Q9UQ05 1017 aa20.07■□□□□ 0.8
PDLIM7-210ENST00000503827 CUL9Q8IWT3 2517 aa20.07■□□□□ 0.8
PDLIM7-210ENST00000503827 RPAP1Q9BWH6 1393 aaPredicted RBP20.07■□□□□ 0.8
PDLIM7-210ENST00000503827 ADCY3O60266 1144 aa20.06■□□□□ 0.8
PDLIM7-210ENST00000503827 FRAT2O75474 233 aaPredicted RBP20.06■□□□□ 0.8
PDLIM7-210ENST00000503827 INPP5BP32019 993 aa20.06■□□□□ 0.8
PDLIM7-210ENST00000503827 CHAF1AQ13111 956 aaPredicted RBP20.06■□□□□ 0.8
PDLIM7-210ENST00000503827 MIGA2Q7L4E1 593 aa20.06■□□□□ 0.8
PDLIM7-210ENST00000503827 ZDHHC15Q96MV8 337 aa20.06■□□□□ 0.8
PDLIM7-210ENST00000503827 GABRQQ9UN88 632 aa20.06■□□□□ 0.8
PDLIM7-210ENST00000503827 BCRP11274 1271 aa20.05■□□□□ 0.8
PDLIM7-210ENST00000503827 DEFB123Q8N688 67 aa20.05■□□□□ 0.8
PDLIM7-210ENST00000503827 MRIQ9BWK5 157 aa20.05■□□□□ 0.8
PDLIM7-210ENST00000503827 BMP8BP34820 402 aa20.04■□□□□ 0.8
PDLIM7-210ENST00000503827 EPHA10Q5JZY3 1008 aa20.04■□□□□ 0.8
PDLIM7-210ENST00000503827 DEFB118Q96PH6 123 aa20.04■□□□□ 0.8
PDLIM7-210ENST00000503827 IQSEC3Q9UPP2 1182 aaPredicted RBP20.04■□□□□ 0.8
PDLIM7-210ENST00000503827 MAST3O60307 1309 aa20.03■□□□□ 0.8
PDLIM7-210ENST00000503827 A0A0C4DFX4 3053 aa20.03■□□□□ 0.8
PDLIM7-210ENST00000503827 INHAP05111 366 aa20.03■□□□□ 0.8
PDLIM7-210ENST00000503827 MOGSQ13724 837 aa20.03■□□□□ 0.8
PDLIM7-210ENST00000503827 PXYLP1Q8TE99 480 aa20.03■□□□□ 0.8
PDLIM7-210ENST00000503827 STXBP5LQ9Y2K9 1186 aa20.03■□□□□ 0.8
PDLIM7-210ENST00000503827 CYP2C8P10632 490 aa20.02■□□□□ 0.8
PDLIM7-210ENST00000503827 ELNP15502 786 aa20.02■□□□□ 0.8
PDLIM7-210ENST00000503827 FLT3LGP49771 235 aa20.02■□□□□ 0.8
PDLIM7-210ENST00000503827 CAVIN4Q5BKX8 364 aa20.02■□□□□ 0.8
PDLIM7-210ENST00000503827 APOBEC3HQ6NTF7 200 aaKnown RBP20.02■□□□□ 0.8
PDLIM7-210ENST00000503827 FBXO33Q7Z6M2 555 aa20.02■□□□□ 0.8
PDLIM7-210ENST00000503827 PAWRQ96IZ0 340 aaKnown RBP20.02■□□□□ 0.8
PDLIM7-210ENST00000503827 GDF15Q99988 308 aa20.02■□□□□ 0.8
PDLIM7-210ENST00000503827 ZNF112Q9UJU3 913 aa20.02■□□□□ 0.8
PDLIM7-210ENST00000503827 BEND3Q5T5X7 828 aa20.01■□□□□ 0.79
PDLIM7-210ENST00000503827 NECAB2Q7Z6G3 386 aa20.01■□□□□ 0.79
PDLIM7-210ENST00000503827 FAM151AQ8WW52 585 aa20.01■□□□□ 0.79
PDLIM7-210ENST00000503827 MROH5Q6ZUA9 1318 aa20.01■□□□□ 0.79
PDLIM7-210ENST00000503827 MYH13Q9UKX3 1938 aa20■□□□□ 0.79
PDLIM7-210ENST00000503827 GRM8O00222 908 aa20■□□□□ 0.79
PDLIM7-210ENST00000503827 CXCL11O14625 94 aa20■□□□□ 0.79
PDLIM7-210ENST00000503827 DDX10Q13206 875 aaKnown RBP20■□□□□ 0.79
PDLIM7-210ENST00000503827 IRF5Q13568 498 aa20■□□□□ 0.79
PDLIM7-210ENST00000503827 NOL9Q5SY16 702 aaKnown RBP20■□□□□ 0.79
PDLIM7-210ENST00000503827 GPAT2Q6NUI2 795 aa20■□□□□ 0.79
PDLIM7-210ENST00000503827 PUS3Q9BZE2 481 aaKnown RBP20■□□□□ 0.79
PDLIM7-210ENST00000503827 CRISPLD2Q9H0B8 497 aa20■□□□□ 0.79
PDLIM7-210ENST00000503827 PAK6Q9NQU5 681 aaPredicted RBP20■□□□□ 0.79
PDLIM7-210ENST00000503827 SUGT1Q9Y2Z0 365 aa20■□□□□ 0.79
PDLIM7-210ENST00000503827 TNPO2O14787 897 aaKnown RBP19.99■□□□□ 0.79
PDLIM7-210ENST00000503827 HHIPL2Q6UWX4 724 aa19.99■□□□□ 0.79
PDLIM7-210ENST00000503827 Q7L0L9 218 aa19.99■□□□□ 0.79
PDLIM7-210ENST00000503827 FASTKD5Q7L8L6 764 aaKnown RBP19.99■□□□□ 0.79
PDLIM7-210ENST00000503827 C7orf61Q8IZ16 206 aa19.99■□□□□ 0.79
PDLIM7-210ENST00000503827 C9orf78Q9NZ63 289 aaPredicted RBP19.99■□□□□ 0.79
PDLIM7-210ENST00000503827 DOCK3Q8IZD9 2030 aa19.98■□□□□ 0.79
PDLIM7-210ENST00000503827 F6X3S4 739 aa19.98■□□□□ 0.79
PDLIM7-210ENST00000503827 BCAMP50895 628 aa19.98■□□□□ 0.79
PDLIM7-210ENST00000503827 LRIT3Q3SXY7 679 aa19.98■□□□□ 0.79
PDLIM7-210ENST00000503827 LAMA3Q16787 3333 aa19.98■□□□□ 0.79
PDLIM7-210ENST00000503827 ANKLE1Q8NAG6 615 aa19.97■□□□□ 0.79
PDLIM7-210ENST00000503827 MTMR10Q9NXD2 777 aa19.97■□□□□ 0.79
PDLIM7-210ENST00000503827 TAOK2Q9UL54 1235 aa19.97■□□□□ 0.79
PDLIM7-210ENST00000503827 ZMYND8Q9ULU4 1186 aaPredicted RBP19.97■□□□□ 0.79
PDLIM7-210ENST00000503827 TCP10Q12799 353 aa19.96■□□□□ 0.79
PDLIM7-210ENST00000503827 DIS3LQ8TF46 1054 aaKnown RBP19.96■□□□□ 0.79
PDLIM7-210ENST00000503827 COL25A1Q9BXS0 654 aaPredicted RBP19.96■□□□□ 0.79
PDLIM7-210ENST00000503827 PTPRFP10586 1907 aa19.96■□□□□ 0.79
PDLIM7-210ENST00000503827 CCDC27Q2M243 656 aa19.95■□□□□ 0.78
PDLIM7-210ENST00000503827 GADL1Q6ZQY3 521 aa19.95■□□□□ 0.78
PDLIM7-210ENST00000503827 TDHQ8IZJ6 230 aa19.95■□□□□ 0.78
PDLIM7-210ENST00000503827 COA7Q96BR5 231 aa19.95■□□□□ 0.78
PDLIM7-210ENST00000503827 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.95■□□□□ 0.788e-9■■■■□ 19.6
PDLIM7-210ENST00000503827 SLC45A1Q9Y2W3 748 aa19.95■□□□□ 0.78
PDLIM7-210ENST00000503827 DOCK2Q92608 1830 aa19.95■□□□□ 0.78
PDLIM7-210ENST00000503827 A0A0G2JLL6 359 aaPredicted RBP19.94■□□□□ 0.78
PDLIM7-210ENST00000503827 METTL24Q5JXM2 366 aa19.94■□□□□ 0.78
PDLIM7-210ENST00000503827 PRRT2Q7Z6L0 340 aaPredicted RBP19.94■□□□□ 0.78
PDLIM7-210ENST00000503827 SMCR8Q8TEV9 937 aaPredicted RBP19.94■□□□□ 0.78
PDLIM7-210ENST00000503827 WWC1Q8IX03 1113 aa19.93■□□□□ 0.78
PDLIM7-210ENST00000503827 NBPF3Q9H094 633 aa19.93■□□□□ 0.78
PDLIM7-210ENST00000503827 PICK1Q9NRD5 415 aa19.93■□□□□ 0.78
PDLIM7-210ENST00000503827 ZHX2Q9Y6X8 837 aa19.93■□□□□ 0.78
PDLIM7-210ENST00000503827 IL16Q14005 1332 aa19.93■□□□□ 0.78
PDLIM7-210ENST00000503827 DDX60LQ5H9U9 1706 aaKnown RBP19.93■□□□□ 0.78
PDLIM7-210ENST00000503827 VAMP4O75379 141 aa19.92■□□□□ 0.78
PDLIM7-210ENST00000503827 PDE8BO95263 885 aa19.92■□□□□ 0.78
PDLIM7-210ENST00000503827 SYN1P17600 705 aa19.92■□□□□ 0.78
PDLIM7-210ENST00000503827 MAGEA10P43363 369 aaPredicted RBP19.92■□□□□ 0.78
PDLIM7-210ENST00000503827 CDC42EP5Q6NZY7 148 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms