RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 SALL1Q9NSC2 1324 aa20.15■□□□□ 0.82
SCLT1-204ENST00000503215 MYH13Q9UKX3 1938 aa20.14■□□□□ 0.82
SCLT1-204ENST00000503215 SEMA3EO15041 775 aa20.14■□□□□ 0.81
SCLT1-204ENST00000503215 NOM1Q5C9Z4 860 aaKnown RBP20.14■□□□□ 0.81
SCLT1-204ENST00000503215 ZKSCAN4Q969J2 545 aaPredicted RBP20.14■□□□□ 0.81
SCLT1-204ENST00000503215 NEUROD6Q96NK8 337 aa20.14■□□□□ 0.81
SCLT1-204ENST00000503215 FAM198AQ9UFP1 575 aa20.14■□□□□ 0.81
SCLT1-204ENST00000503215 TESPA1A2RU30 521 aaPredicted RBP20.13■□□□□ 0.81
SCLT1-204ENST00000503215 FKTNO75072 461 aa20.13■□□□□ 0.81
SCLT1-204ENST00000503215 RGS19P49795 217 aa20.13■□□□□ 0.81
SCLT1-204ENST00000503215 PI16Q6UXB8 463 aa20.13■□□□□ 0.81
SCLT1-204ENST00000503215 USP40Q9NVE5 1235 aa20.13■□□□□ 0.81
SCLT1-204ENST00000503215 AKAP2Q9Y2D5 859 aa20.13■□□□□ 0.81
SCLT1-204ENST00000503215 SNCAIPQ9Y6H5 919 aa20.13■□□□□ 0.81
SCLT1-204ENST00000503215 ALDH1A1P00352 501 aa20.12■□□□□ 0.81
SCLT1-204ENST00000503215 CRHR2Q13324 411 aa20.12■□□□□ 0.81
SCLT1-204ENST00000503215 BRI3BPQ8WY22 251 aa20.12■□□□□ 0.81
SCLT1-204ENST00000503215 OTUD5Q96G74 571 aa20.12■□□□□ 0.81
SCLT1-204ENST00000503215 WRNIP1Q96S55 665 aa20.12■□□□□ 0.81
SCLT1-204ENST00000503215 ABCF2Q9UG63 623 aa20.12■□□□□ 0.81
SCLT1-204ENST00000503215 ZNF384Q8TF68 577 aa20.11■□□□□ 0.81
SCLT1-204ENST00000503215 FAM151AQ8WW52 585 aa20.11■□□□□ 0.81
SCLT1-204ENST00000503215 HPS5Q9UPZ3 1129 aa20.11■□□□□ 0.81
SCLT1-204ENST00000503215 CSADQ9Y600 493 aa20.11■□□□□ 0.81
SCLT1-204ENST00000503215 ZBTB22O15209 634 aa20.1■□□□□ 0.81
SCLT1-204ENST00000503215 INPP5BP32019 993 aa20.1■□□□□ 0.81
SCLT1-204ENST00000503215 SOX10P56693 466 aa20.1■□□□□ 0.81
SCLT1-204ENST00000503215 CAP1Q01518 475 aa20.1■□□□□ 0.81
SCLT1-204ENST00000503215 G3BP1Q13283 466 aaKnown RBP eCLIP20.1■□□□□ 0.81
SCLT1-204ENST00000503215 POLA2Q14181 598 aa20.1■□□□□ 0.81
SCLT1-204ENST00000503215 MVPQ14764 893 aaKnown RBP20.1■□□□□ 0.81
SCLT1-204ENST00000503215 TBC1D9Q6ZT07 1266 aa20.1■□□□□ 0.81
SCLT1-204ENST00000503215 HMG20BQ9P0W2 317 aa20.1■□□□□ 0.81
SCLT1-204ENST00000503215 GAKO14976 1311 aa20.09■□□□□ 0.81
SCLT1-204ENST00000503215 ZBED9Q6R2W3 1325 aa20.09■□□□□ 0.81
SCLT1-204ENST00000503215 ZBTB7BO15156 539 aaPredicted RBP20.09■□□□□ 0.81
SCLT1-204ENST00000503215 SLURP2P0DP57 97 aa20.09■□□□□ 0.81
SCLT1-204ENST00000503215 ATP8B2P98198 1209 aa20.09■□□□□ 0.81
SCLT1-204ENST00000503215 RPAP1Q9BWH6 1393 aaPredicted RBP20.09■□□□□ 0.81
SCLT1-204ENST00000503215 CCL15-CCL14A0A0B4J2E2 113 aa20.08■□□□□ 0.81
SCLT1-204ENST00000503215 SPDYE5A6NIY4 337 aa20.08■□□□□ 0.81
SCLT1-204ENST00000503215 CCL15Q16663 113 aa20.08■□□□□ 0.81
SCLT1-204ENST00000503215 ITPRIPQ8IWB1 547 aa20.08■□□□□ 0.81
SCLT1-204ENST00000503215 SSH3Q8TE77 659 aa20.08■□□□□ 0.81
SCLT1-204ENST00000503215 PDS5AQ29RF7 1337 aaKnown RBP20.08■□□□□ 0.8
SCLT1-204ENST00000503215 RGS3P49796 1198 aa20.08■□□□□ 0.8
SCLT1-204ENST00000503215 MECOMQ03112 1051 aa20.08■□□□□ 0.8
SCLT1-204ENST00000503215 SH3BP5LQ7L8J4 393 aa20.08■□□□□ 0.8
SCLT1-204ENST00000503215 DZIP1Q86YF9 867 aaKnown RBP20.08■□□□□ 0.8
SCLT1-204ENST00000503215 FTSJ3Q8IY81 847 aaKnown RBP20.08■□□□□ 0.8
SCLT1-204ENST00000503215 FAM43AQ8N2R8 423 aa20.08■□□□□ 0.8
SCLT1-204ENST00000503215 ZGPATQ8N5A5 531 aaKnown RBP20.08■□□□□ 0.8
SCLT1-204ENST00000503215 PANK1Q8TE04 598 aa20.08■□□□□ 0.8
SCLT1-204ENST00000503215 ZNF341Q9BYN7 854 aa20.08■□□□□ 0.8
SCLT1-204ENST00000503215 LAMB1P07942 1786 aa20.08■□□□□ 0.8
SCLT1-204ENST00000503215 IRF6O14896 467 aa20.07■□□□□ 0.8
SCLT1-204ENST00000503215 GTF2A2P52657 109 aa20.07■□□□□ 0.8
SCLT1-204ENST00000503215 MLLT1Q03111 559 aaPredicted RBP20.07■□□□□ 0.8
SCLT1-204ENST00000503215 PKN2Q16513 984 aaKnown RBP20.07■□□□□ 0.8
SCLT1-204ENST00000503215 GORABQ5T7V8 394 aa20.07■□□□□ 0.8
SCLT1-204ENST00000503215 DCAF15Q66K64 600 aa20.07■□□□□ 0.8
SCLT1-204ENST00000503215 OTUD7BQ6GQQ9 843 aa20.07■□□□□ 0.8
SCLT1-204ENST00000503215 ERO1BQ86YB8 467 aa20.07■□□□□ 0.8
SCLT1-204ENST00000503215 SPATA5Q8NB90 893 aa20.07■□□□□ 0.8
SCLT1-204ENST00000503215 DDX4Q9NQI0 724 aaKnown RBP20.07■□□□□ 0.8
SCLT1-204ENST00000503215 ZNF112Q9UJU3 913 aa20.07■□□□□ 0.8
SCLT1-204ENST00000503215 MYH2Q9UKX2 1941 aa20.06■□□□□ 0.8
SCLT1-204ENST00000503215 WDHD1O75717 1129 aaPredicted RBP20.06■□□□□ 0.8
SCLT1-204ENST00000503215 MCAMP43121 646 aa20.06■□□□□ 0.8
SCLT1-204ENST00000503215 CD99L2Q8TCZ2 262 aa20.06■□□□□ 0.8
SCLT1-204ENST00000503215 FAM163AQ96GL9 167 aaPredicted RBP20.06■□□□□ 0.8
SCLT1-204ENST00000503215 SURF6O75683 361 aaKnown RBP20.05■□□□□ 0.8
SCLT1-204ENST00000503215 ARID4AP29374 1257 aaPredicted RBP20.05■□□□□ 0.8
SCLT1-204ENST00000503215 BTDP43251 543 aa20.05■□□□□ 0.8
SCLT1-204ENST00000503215 SPTY2D1Q68D10 685 aaPredicted RBP20.05■□□□□ 0.8
SCLT1-204ENST00000503215 FBXO46Q6PJ61 603 aaPredicted RBP20.05■□□□□ 0.8
SCLT1-204ENST00000503215 ERICH6Q7L0X2 663 aa20.05■□□□□ 0.8
SCLT1-204ENST00000503215 OTOP1Q7RTM1 612 aa20.05■□□□□ 0.8
SCLT1-204ENST00000503215 HOOK2Q96ED9 719 aa20.05■□□□□ 0.8
SCLT1-204ENST00000503215 DBNDD2Q9BQY9 259 aa20.05■□□□□ 0.8
SCLT1-204ENST00000503215 IDI2Q9BXS1 227 aa20.05■□□□□ 0.8
SCLT1-204ENST00000503215 SNRKQ9NRH2 765 aa20.05■□□□□ 0.8
SCLT1-204ENST00000503215 TRIM17Q9Y577 477 aa20.05■□□□□ 0.8
SCLT1-204ENST00000503215 RFX7Q2KHR2 1363 aa20.04■□□□□ 0.8
SCLT1-204ENST00000503215 RHBDL3P58872 404 aa20.04■□□□□ 0.8
SCLT1-204ENST00000503215 PPIL2Q13356 520 aa20.04■□□□□ 0.8
SCLT1-204ENST00000503215 TNNI3KQ59H18 835 aa20.04■□□□□ 0.8
SCLT1-204ENST00000503215 FPGT-TNNI3KV9GXZ4 949 aa20.04■□□□□ 0.8
SCLT1-204ENST00000503215 AK9Q5TCS8 1911 aa20.03■□□□□ 0.8
SCLT1-204ENST00000503215 ATRNL1Q5VV63 1379 aa20.03■□□□□ 0.8
SCLT1-204ENST00000503215 MROH7-TTC4A0A0A0MT08 1334 aa20.03■□□□□ 0.8
SCLT1-204ENST00000503215 GPR75-ASB3A0A0A6YYF3 556 aa20.03■□□□□ 0.8
SCLT1-204ENST00000503215 DDTLA6NHG4 134 aaPredicted RBP20.03■□□□□ 0.8
SCLT1-204ENST00000503215 BTBD19C9JJ37 291 aa20.03■□□□□ 0.8
SCLT1-204ENST00000503215 OS9Q13438 667 aaPredicted RBP20.03■□□□□ 0.8
SCLT1-204ENST00000503215 PICALMQ13492 652 aa20.03■□□□□ 0.8
SCLT1-204ENST00000503215 TAF1CQ15572 869 aaPredicted RBP20.03■□□□□ 0.8
SCLT1-204ENST00000503215 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.03■□□□□ 0.8
SCLT1-204ENST00000503215 PHF20L1A8MW92 1017 aa20.02■□□□□ 0.8
SCLT1-204ENST00000503215 ENTPD3O75355 529 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms