RNA–Protein interactions for RNA: ENST00000502315.1

SH3RF1-202, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 4

Gene SH3RF1, Length 487 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-202ENST00000502315 USP44Q9H0E7 712 aa8.95□□□□□ -0.98
SH3RF1-202ENST00000502315 ZNF112Q9UJU3 913 aa8.95□□□□□ -0.98
SH3RF1-202ENST00000502315 PDS5AQ29RF7 1337 aaKnown RBP8.95□□□□□ -0.98
SH3RF1-202ENST00000502315 SALL1Q9NSC2 1324 aa8.95□□□□□ -0.98
SH3RF1-202ENST00000502315 CCL15-CCL14A0A0B4J2E2 113 aa8.94□□□□□ -0.98
SH3RF1-202ENST00000502315 TCP10L2B9ZVM9 353 aa8.94□□□□□ -0.98
SH3RF1-202ENST00000502315 EYA2O00167 538 aa8.94□□□□□ -0.98
SH3RF1-202ENST00000502315 CXCL11O14625 94 aa8.94□□□□□ -0.98
SH3RF1-202ENST00000502315 CCL15Q16663 113 aa8.94□□□□□ -0.98
SH3RF1-202ENST00000502315 ANKRD23Q86SG2 305 aa8.94□□□□□ -0.98
SH3RF1-202ENST00000502315 SLF2Q8IX21 1173 aa8.94□□□□□ -0.98
SH3RF1-202ENST00000502315 ANKRD44Q8N8A2 993 aa8.94□□□□□ -0.98
SH3RF1-202ENST00000502315 NKX2-3Q8TAU0 364 aa8.94□□□□□ -0.98
SH3RF1-202ENST00000502315 BRI3BPQ8WY22 251 aa8.94□□□□□ -0.98
SH3RF1-202ENST00000502315 ZNF333Q96JL9 665 aa8.94□□□□□ -0.98
SH3RF1-202ENST00000502315 ZNF341Q9BYN7 854 aa8.94□□□□□ -0.98
SH3RF1-202ENST00000502315 TMEM39BQ9GZU3 492 aa8.94□□□□□ -0.98
SH3RF1-202ENST00000502315 ELP3Q9H9T3 547 aa8.94□□□□□ -0.98
SH3RF1-202ENST00000502315 PCDHAC2Q9Y5I4 1007 aa8.94□□□□□ -0.98
SH3RF1-202ENST00000502315 ARAP2Q8WZ64 1704 aa8.94□□□□□ -0.98
SH3RF1-202ENST00000502315 RBBP6Q7Z6E9 1792 aaKnown RBP8.94□□□□□ -0.98
SH3RF1-202ENST00000502315 MAP3K10Q02779 954 aa8.93□□□□□ -0.98
SH3RF1-202ENST00000502315 SLC9C1Q4G0N8 1177 aa8.93□□□□□ -0.98
SH3RF1-202ENST00000502315 LRRC24Q50LG9 513 aa8.93□□□□□ -0.98
SH3RF1-202ENST00000502315 NOL9Q5SY16 702 aaKnown RBP8.93□□□□□ -0.98
SH3RF1-202ENST00000502315 CD99L2Q8TCZ2 262 aa8.93□□□□□ -0.98
SH3RF1-202ENST00000502315 FAM163AQ96GL9 167 aaPredicted RBP8.93□□□□□ -0.98
SH3RF1-202ENST00000502315 CEP126Q9P2H0 1117 aa8.93□□□□□ -0.98
SH3RF1-202ENST00000502315 DENND2AQ9ULE3 1009 aa8.93□□□□□ -0.98
SH3RF1-202ENST00000502315 KCNH4Q9UQ05 1017 aa8.93□□□□□ -0.98
SH3RF1-202ENST00000502315 SLC45A1Q9Y2W3 748 aa8.93□□□□□ -0.98
SH3RF1-202ENST00000502315 SALL2Q9Y467 1007 aaPredicted RBP8.93□□□□□ -0.98
SH3RF1-202ENST00000502315 ENTPD3O75355 529 aa8.92□□□□□ -0.98
SH3RF1-202ENST00000502315 PRKAR2AP13861 404 aaKnown RBP8.92□□□□□ -0.98
SH3RF1-202ENST00000502315 IL15P40933 162 aaPredicted RBP8.92□□□□□ -0.98
SH3RF1-202ENST00000502315 RFX5P48382 616 aaPredicted RBP8.92□□□□□ -0.98
SH3RF1-202ENST00000502315 BCAMP50895 628 aa8.92□□□□□ -0.98
SH3RF1-202ENST00000502315 LACTBP83111 547 aaPredicted RBP8.92□□□□□ -0.98
SH3RF1-202ENST00000502315 SLFN5Q08AF3 891 aa8.92□□□□□ -0.98
SH3RF1-202ENST00000502315 C17orf99Q6UX52 265 aa8.92□□□□□ -0.98
SH3RF1-202ENST00000502315 FASTKD5Q7L8L6 764 aaKnown RBP8.92□□□□□ -0.98
SH3RF1-202ENST00000502315 TRMT2AQ8IZ69 625 aaKnown RBP8.92□□□□□ -0.98
SH3RF1-202ENST00000502315 FAM9BQ8IZU0 186 aa8.92□□□□□ -0.98
SH3RF1-202ENST00000502315 ARHGAP45Q92619 1136 aa8.92□□□□□ -0.98
SH3RF1-202ENST00000502315 WRNIP1Q96S55 665 aa8.92□□□□□ -0.98
SH3RF1-202ENST00000502315 IDI2Q9BXS1 227 aa8.92□□□□□ -0.98
SH3RF1-202ENST00000502315 TBC1D2Q9BYX2 928 aa8.92□□□□□ -0.98
SH3RF1-202ENST00000502315 FZD1Q9UP38 647 aa8.92□□□□□ -0.98
SH3RF1-202ENST00000502315 SNCAIPQ9Y6H5 919 aa8.92□□□□□ -0.98
SH3RF1-202ENST00000502315 POTEFA5A3E0 1075 aa8.91□□□□□ -0.98
SH3RF1-202ENST00000502315 BTBD19C9JJ37 291 aa8.91□□□□□ -0.98
SH3RF1-202ENST00000502315 IRF6O14896 467 aa8.91□□□□□ -0.98
SH3RF1-202ENST00000502315 LDHBP07195 334 aaKnown RBP8.91□□□□□ -0.98
SH3RF1-202ENST00000502315 CHAF1AQ13111 956 aaPredicted RBP8.91□□□□□ -0.98
SH3RF1-202ENST00000502315 SPTY2D1Q68D10 685 aaPredicted RBP8.91□□□□□ -0.98
SH3RF1-202ENST00000502315 FAM43AQ8N2R8 423 aa8.91□□□□□ -0.98
SH3RF1-202ENST00000502315 SSH1Q8WYL5 1049 aa8.91□□□□□ -0.98
SH3RF1-202ENST00000502315 OTUD5Q96G74 571 aa8.91□□□□□ -0.98
SH3RF1-202ENST00000502315 API5Q9BZZ5 524 aaKnown RBP8.91□□□□□ -0.98
SH3RF1-202ENST00000502315 COPRSQ9NQ92 184 aa8.91□□□□□ -0.98
SH3RF1-202ENST00000502315 AKAP2Q9Y2D5 859 aa8.91□□□□□ -0.98
SH3RF1-202ENST00000502315 AOX1Q06278 1338 aa8.9□□□□□ -0.98
SH3RF1-202ENST00000502315 TBC1D12O60347 775 aa8.9□□□□□ -0.98
SH3RF1-202ENST00000502315 UBTFL1P0CB47 393 aaPredicted RBP8.9□□□□□ -0.98
SH3RF1-202ENST00000502315 HABP4Q5JVS0 413 aaKnown RBP8.9□□□□□ -0.98
SH3RF1-202ENST00000502315 ATG9AQ7Z3C6 839 aa8.9□□□□□ -0.98
SH3RF1-202ENST00000502315 SRRDQ9UH36 339 aa8.9□□□□□ -0.98
SH3RF1-202ENST00000502315 JAG2Q9Y219 1238 aa8.9□□□□□ -0.98
SH3RF1-202ENST00000502315 HTTP42858 3142 aa8.89□□□□□ -0.99
SH3RF1-202ENST00000502315 C19orf67A6NJJ6 358 aa8.89□□□□□ -0.99
SH3RF1-202ENST00000502315 GNAI3P08754 354 aa8.89□□□□□ -0.99
SH3RF1-202ENST00000502315 ATP2B3Q16720 1220 aa8.89□□□□□ -0.99
SH3RF1-202ENST00000502315 SLC4A8Q2Y0W8 1093 aa8.89□□□□□ -0.99
SH3RF1-202ENST00000502315 CDC42EP5Q6NZY7 148 aa8.89□□□□□ -0.99
SH3RF1-202ENST00000502315 ZKSCAN4Q969J2 545 aaPredicted RBP8.89□□□□□ -0.99
SH3RF1-202ENST00000502315 TRIM47Q96LD4 638 aa8.89□□□□□ -0.99
SH3RF1-202ENST00000502315 PARK7Q99497 189 aaKnown RBP8.89□□□□□ -0.99
SH3RF1-202ENST00000502315 PTCH2Q9Y6C5 1203 aa8.89□□□□□ -0.99
SH3RF1-202ENST00000502315 GAKO14976 1311 aa8.88□□□□□ -0.99
SH3RF1-202ENST00000502315 PDHXO00330 501 aa8.88□□□□□ -0.99
SH3RF1-202ENST00000502315 CTNND1O60716 968 aaKnown RBP8.88□□□□□ -0.99
SH3RF1-202ENST00000502315 LDHCP07864 332 aa8.88□□□□□ -0.99
SH3RF1-202ENST00000502315 EN2P19622 333 aaPredicted RBP8.88□□□□□ -0.99
SH3RF1-202ENST00000502315 UBXN2AP68543 259 aa8.88□□□□□ -0.99
SH3RF1-202ENST00000502315 MTX1Q13505 466 aa8.88□□□□□ -0.99
SH3RF1-202ENST00000502315 MVPQ14764 893 aaKnown RBP8.88□□□□□ -0.99
SH3RF1-202ENST00000502315 GRIK5Q16478 980 aa8.88□□□□□ -0.99
SH3RF1-202ENST00000502315 TMED8Q6PL24 325 aaPredicted RBP8.88□□□□□ -0.99
SH3RF1-202ENST00000502315 SLAIN1Q8ND83 568 aa8.88□□□□□ -0.99
SH3RF1-202ENST00000502315 PXYLP1Q8TE99 480 aa8.88□□□□□ -0.99
SH3RF1-202ENST00000502315 SMC4Q9NTJ3 1288 aa8.88□□□□□ -0.99
SH3RF1-202ENST00000502315 GINM1Q9NU53 330 aa8.88□□□□□ -0.99
SH3RF1-202ENST00000502315 USP40Q9NVE5 1235 aa8.88□□□□□ -0.99
SH3RF1-202ENST00000502315 IQSEC3Q9UPP2 1182 aaPredicted RBP8.88□□□□□ -0.99
SH3RF1-202ENST00000502315 DAGLAQ9Y4D2 1042 aa8.88□□□□□ -0.99
SH3RF1-202ENST00000502315 OTOFQ9HC10 1997 aa8.88□□□□□ -0.99
SH3RF1-202ENST00000502315 MKI67P46013 3256 aaKnown RBP8.88□□□□□ -0.99
SH3RF1-202ENST00000502315 ADGRA2Q96PE1 1338 aa8.87□□□□□ -0.99
SH3RF1-202ENST00000502315 CENPFP49454 3210 aa8.87□□□□□ -0.99
SH3RF1-202ENST00000502315 A0A0G2JLL6 359 aaPredicted RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms