RNA–Protein interactions for RNA: ENST00000498698.1

HMGCL-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-207ENST00000498698 ALDH1A1P00352 501 aa11.7□□□□□ -0.54
HMGCL-207ENST00000498698 NFIAQ12857 509 aa11.7□□□□□ -0.54
HMGCL-207ENST00000498698 CTU1Q7Z7A3 348 aaKnown RBP11.7□□□□□ -0.54
HMGCL-207ENST00000498698 ITPRIPQ8IWB1 547 aa11.7□□□□□ -0.54
HMGCL-207ENST00000498698 ZGPATQ8N5A5 531 aaKnown RBP11.7□□□□□ -0.54
HMGCL-207ENST00000498698 CNKSR2Q8WXI2 1034 aa11.7□□□□□ -0.54
HMGCL-207ENST00000498698 OPTNQ96CV9 577 aa11.7□□□□□ -0.54
HMGCL-207ENST00000498698 FAM163AQ96GL9 167 aaPredicted RBP11.7□□□□□ -0.54
HMGCL-207ENST00000498698 MS4A4AQ96JQ5 239 aa11.7□□□□□ -0.54
HMGCL-207ENST00000498698 NEUROD6Q96NK8 337 aa11.7□□□□□ -0.54
HMGCL-207ENST00000498698 C1orf115Q9H7X2 142 aa11.7□□□□□ -0.54
HMGCL-207ENST00000498698 USP40Q9NVE5 1235 aa11.7□□□□□ -0.54
HMGCL-207ENST00000498698 HMG20BQ9P0W2 317 aa11.7□□□□□ -0.54
HMGCL-207ENST00000498698 FAM198AQ9UFP1 575 aa11.7□□□□□ -0.54
HMGCL-207ENST00000498698 GAKO14976 1311 aa11.69□□□□□ -0.54
HMGCL-207ENST00000498698 CCDC85CA6NKD9 419 aa11.69□□□□□ -0.54
HMGCL-207ENST00000498698 HOOK2Q96ED9 719 aa11.69□□□□□ -0.54
HMGCL-207ENST00000498698 PTPN18Q99952 460 aa11.69□□□□□ -0.54
HMGCL-207ENST00000498698 GPR108Q9NPR9 543 aa11.69□□□□□ -0.54
HMGCL-207ENST00000498698 ABCF2Q9UG63 623 aa11.69□□□□□ -0.54
HMGCL-207ENST00000498698 NOP58Q9Y2X3 529 aaKnown RBP11.69□□□□□ -0.54
HMGCL-207ENST00000498698 RPAP1Q9BWH6 1393 aaPredicted RBP11.68□□□□□ -0.54
HMGCL-207ENST00000498698 SURF6O75683 361 aaKnown RBP11.68□□□□□ -0.54
HMGCL-207ENST00000498698 ARID4AP29374 1257 aaPredicted RBP11.68□□□□□ -0.54
HMGCL-207ENST00000498698 TCP10Q12799 353 aa11.68□□□□□ -0.54
HMGCL-207ENST00000498698 GORABQ5T7V8 394 aa11.68□□□□□ -0.54
HMGCL-207ENST00000498698 SPTY2D1Q68D10 685 aaPredicted RBP11.68□□□□□ -0.54
HMGCL-207ENST00000498698 PI16Q6UXB8 463 aa11.68□□□□□ -0.54
HMGCL-207ENST00000498698 ZFPM1Q8IX07 1006 aa11.68□□□□□ -0.54
HMGCL-207ENST00000498698 SPATA5Q8NB90 893 aa11.68□□□□□ -0.54
HMGCL-207ENST00000498698 PANK1Q8TE04 598 aa11.68□□□□□ -0.54
HMGCL-207ENST00000498698 ZNF384Q8TF68 577 aa11.68□□□□□ -0.54
HMGCL-207ENST00000498698 WRNIP1Q96S55 665 aa11.68□□□□□ -0.54
HMGCL-207ENST00000498698 CSADQ9Y600 493 aa11.68□□□□□ -0.54
HMGCL-207ENST00000498698 SNCAIPQ9Y6H5 919 aa11.68□□□□□ -0.54
HMGCL-207ENST00000498698 SPDYE5A6NIY4 337 aa11.67□□□□□ -0.54
HMGCL-207ENST00000498698 FKTNO75072 461 aa11.67□□□□□ -0.54
HMGCL-207ENST00000498698 MECOMQ03112 1051 aa11.67□□□□□ -0.54
HMGCL-207ENST00000498698 TNNI3KQ59H18 835 aa11.67□□□□□ -0.54
HMGCL-207ENST00000498698 DCAF15Q66K64 600 aa11.67□□□□□ -0.54
HMGCL-207ENST00000498698 TBC1D9Q6ZT07 1266 aa11.67□□□□□ -0.54
HMGCL-207ENST00000498698 MIGA2Q7L4E1 593 aa11.67□□□□□ -0.54
HMGCL-207ENST00000498698 DZIP1Q86YF9 867 aaKnown RBP11.67□□□□□ -0.54
HMGCL-207ENST00000498698 SLF2Q8IX21 1173 aa11.67□□□□□ -0.54
HMGCL-207ENST00000498698 BRI3BPQ8WY22 251 aa11.67□□□□□ -0.54
HMGCL-207ENST00000498698 ZKSCAN4Q969J2 545 aaPredicted RBP11.67□□□□□ -0.54
HMGCL-207ENST00000498698 IDI2Q9BXS1 227 aa11.67□□□□□ -0.54
HMGCL-207ENST00000498698 ZNF341Q9BYN7 854 aa11.67□□□□□ -0.54
HMGCL-207ENST00000498698 ZNF112Q9UJU3 913 aa11.67□□□□□ -0.54
HMGCL-207ENST00000498698 FPGT-TNNI3KV9GXZ4 949 aa11.67□□□□□ -0.54
HMGCL-207ENST00000498698 GPR75-ASB3A0A0A6YYF3 556 aa11.66□□□□□ -0.54
HMGCL-207ENST00000498698 ENTPD3O75355 529 aa11.66□□□□□ -0.54
HMGCL-207ENST00000498698 WDHD1O75717 1129 aaPredicted RBP11.66□□□□□ -0.54
HMGCL-207ENST00000498698 UQCRFS1P1P0C7P4 283 aa11.66□□□□□ -0.54
HMGCL-207ENST00000498698 INPP5BP32019 993 aa11.66□□□□□ -0.54
HMGCL-207ENST00000498698 MCAMP43121 646 aa11.66□□□□□ -0.54
HMGCL-207ENST00000498698 RGS19P49795 217 aa11.66□□□□□ -0.54
HMGCL-207ENST00000498698 RGS3P49796 1198 aa11.66□□□□□ -0.54
HMGCL-207ENST00000498698 GTF2A2P52657 109 aa11.66□□□□□ -0.54
HMGCL-207ENST00000498698 OS9Q13438 667 aaPredicted RBP11.66□□□□□ -0.54
HMGCL-207ENST00000498698 PKN2Q16513 984 aaKnown RBP11.66□□□□□ -0.54
HMGCL-207ENST00000498698 OTUD7BQ6GQQ9 843 aa11.66□□□□□ -0.54
HMGCL-207ENST00000498698 CEP85Q6P2H3 762 aa11.66□□□□□ -0.54
HMGCL-207ENST00000498698 ERICH6Q7L0X2 663 aa11.66□□□□□ -0.54
HMGCL-207ENST00000498698 ERO1BQ86YB8 467 aa11.66□□□□□ -0.54
HMGCL-207ENST00000498698 OTUD5Q96G74 571 aa11.66□□□□□ -0.54
HMGCL-207ENST00000498698 DBNDD2Q9BQY9 259 aa11.66□□□□□ -0.54
HMGCL-207ENST00000498698 RFX7Q2KHR2 1363 aa11.66□□□□□ -0.54
HMGCL-207ENST00000498698 MROH7-TTC4A0A0A0MT08 1334 aa11.65□□□□□ -0.54
HMGCL-207ENST00000498698 CASP8AP2Q9UKL3 1982 aa11.65□□□□□ -0.54
HMGCL-207ENST00000498698 CCL15-CCL14A0A0B4J2E2 113 aa11.65□□□□□ -0.54
HMGCL-207ENST00000498698 IRF6O14896 467 aa11.65□□□□□ -0.54
HMGCL-207ENST00000498698 BTDP43251 543 aa11.65□□□□□ -0.54
HMGCL-207ENST00000498698 RHBDL3P58872 404 aa11.65□□□□□ -0.54
HMGCL-207ENST00000498698 CRHR2Q13324 411 aa11.65□□□□□ -0.54
HMGCL-207ENST00000498698 CCL15Q16663 113 aa11.65□□□□□ -0.54
HMGCL-207ENST00000498698 SH3BP5LQ7L8J4 393 aa11.65□□□□□ -0.54
HMGCL-207ENST00000498698 NSUN4Q96CB9 384 aaKnown RBP11.65□□□□□ -0.54
HMGCL-207ENST00000498698 ZNF512BQ96KM6 892 aaPredicted RBP11.65□□□□□ -0.54
HMGCL-207ENST00000498698 ARAP2Q8WZ64 1704 aa11.65□□□□□ -0.54
HMGCL-207ENST00000498698 ATRNL1Q5VV63 1379 aa11.65□□□□□ -0.55
HMGCL-207ENST00000498698 LDHCP07864 332 aa11.64□□□□□ -0.55
HMGCL-207ENST00000498698 MS4A1P11836 297 aa11.64□□□□□ -0.55
HMGCL-207ENST00000498698 MAP3K10Q02779 954 aa11.64□□□□□ -0.55
HMGCL-207ENST00000498698 PPIL2Q13356 520 aa11.64□□□□□ -0.55
HMGCL-207ENST00000498698 CCDC158Q5M9N0 1113 aa11.64□□□□□ -0.55
HMGCL-207ENST00000498698 FAM43AQ8N2R8 423 aa11.64□□□□□ -0.55
HMGCL-207ENST00000498698 EAF2Q96CJ1 260 aaPredicted RBP11.64□□□□□ -0.55
HMGCL-207ENST00000498698 DDX4Q9NQI0 724 aaKnown RBP11.64□□□□□ -0.55
HMGCL-207ENST00000498698 SNRKQ9NRH2 765 aa11.64□□□□□ -0.55
HMGCL-207ENST00000498698 HPS5Q9UPZ3 1129 aa11.64□□□□□ -0.55
HMGCL-207ENST00000498698 DDTLA6NHG4 134 aaPredicted RBP11.63□□□□□ -0.55
HMGCL-207ENST00000498698 PHF20L1A8MW92 1017 aa11.63□□□□□ -0.55
HMGCL-207ENST00000498698 NPM3O75607 178 aaKnown RBP11.63□□□□□ -0.55
HMGCL-207ENST00000498698 MAP4K4O95819 1239 aaPredicted RBP11.63□□□□□ -0.55
HMGCL-207ENST00000498698 CETPP11597 493 aa11.63□□□□□ -0.55
HMGCL-207ENST00000498698 GSTO1P78417 241 aa11.63□□□□□ -0.55
HMGCL-207ENST00000498698 PPATQ06203 517 aa11.63□□□□□ -0.55
HMGCL-207ENST00000498698 SNAPC2Q13487 334 aa11.63□□□□□ -0.55
HMGCL-207ENST00000498698 TTC39AQ5SRH9 613 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms