RNA–Protein interactions for RNA: ENST00000498579.5

ECM1-207, Transcript of extracellular matrix protein 1, humanhuman

TSL 3

Gene ECM1, Length 943 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-207ENST00000498579 ATP8B2P98198 1209 aa23.19■■□□□ 1.3
ECM1-207ENST00000498579 POLA2Q14181 598 aa23.19■■□□□ 1.3
ECM1-207ENST00000498579 CDAN1Q8IWY9 1227 aa23.19■■□□□ 1.3
ECM1-207ENST00000498579 FAM151AQ8WW52 585 aa23.19■■□□□ 1.3
ECM1-207ENST00000498579 ELP3Q9H9T3 547 aa23.19■■□□□ 1.3
ECM1-207ENST00000498579 GPR25O00155 361 aa23.18■■□□□ 1.3
ECM1-207ENST00000498579 OS9Q13438 667 aaPredicted RBP23.18■■□□□ 1.3
ECM1-207ENST00000498579 PKN2Q16513 984 aaKnown RBP23.18■■□□□ 1.3
ECM1-207ENST00000498579 CDC42EP5Q6NZY7 148 aa23.18■■□□□ 1.3
ECM1-207ENST00000498579 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.18■■□□□ 1.3
ECM1-207ENST00000498579 SSH3Q8TE77 659 aa23.18■■□□□ 1.3
ECM1-207ENST00000498579 ZNF296Q8WUU4 475 aaPredicted RBP23.18■■□□□ 1.3
ECM1-207ENST00000498579 OPTNQ96CV9 577 aa23.18■■□□□ 1.3
ECM1-207ENST00000498579 GPR108Q9NPR9 543 aa23.18■■□□□ 1.3
ECM1-207ENST00000498579 ABCF2Q9UG63 623 aa23.18■■□□□ 1.3
ECM1-207ENST00000498579 ZBTB7BO15156 539 aaPredicted RBP23.17■■□□□ 1.3
ECM1-207ENST00000498579 UQCRFS1P1P0C7P4 283 aa23.17■■□□□ 1.3
ECM1-207ENST00000498579 VGLL4Q14135 290 aa23.17■■□□□ 1.3
ECM1-207ENST00000498579 USP40Q9NVE5 1235 aa23.17■■□□□ 1.3
ECM1-207ENST00000498579 AKAP11Q9UKA4 1901 aa23.17■■□□□ 1.3
ECM1-207ENST00000498579 GAKO14976 1311 aa23.16■■□□□ 1.3
ECM1-207ENST00000498579 ERICH6Q7L0X2 663 aa23.16■■□□□ 1.3
ECM1-207ENST00000498579 FAM163AQ96GL9 167 aaPredicted RBP23.16■■□□□ 1.3
ECM1-207ENST00000498579 WRNIP1Q96S55 665 aa23.16■■□□□ 1.3
ECM1-207ENST00000498579 ZNF341Q9BYN7 854 aa23.16■■□□□ 1.3
ECM1-207ENST00000498579 TESPA1A2RU30 521 aaPredicted RBP23.15■■□□□ 1.3
ECM1-207ENST00000498579 FKTNO75072 461 aa23.15■■□□□ 1.3
ECM1-207ENST00000498579 RLBP1P12271 317 aa23.15■■□□□ 1.3
ECM1-207ENST00000498579 ARID4AP29374 1257 aaPredicted RBP23.15■■□□□ 1.3
ECM1-207ENST00000498579 GJA5P36382 358 aa23.15■■□□□ 1.3
ECM1-207ENST00000498579 GTF2A2P52657 109 aa23.15■■□□□ 1.3
ECM1-207ENST00000498579 SURF6O75683 361 aaKnown RBP23.14■■□□□ 1.29
ECM1-207ENST00000498579 GSTO1P78417 241 aa23.14■■□□□ 1.29
ECM1-207ENST00000498579 SPATA5Q8NB90 893 aa23.14■■□□□ 1.29
ECM1-207ENST00000498579 CASP8AP2Q9UKL3 1982 aa23.13■■□□□ 1.29
ECM1-207ENST00000498579 SPDYE5A6NIY4 337 aa23.13■■□□□ 1.29
ECM1-207ENST00000498579 IGF2BP3O00425 579 aaKnown RBP eCLIP23.13■■□□□ 1.29
ECM1-207ENST00000498579 TCP10Q12799 353 aa23.13■■□□□ 1.29
ECM1-207ENST00000498579 CCDC158Q5M9N0 1113 aa23.13■■□□□ 1.29
ECM1-207ENST00000498579 ERO1BQ86YB8 467 aa23.13■■□□□ 1.29
ECM1-207ENST00000498579 IDI2Q9BXS1 227 aa23.13■■□□□ 1.29
ECM1-207ENST00000498579 C1orf115Q9H7X2 142 aa23.13■■□□□ 1.29
ECM1-207ENST00000498579 HMG20BQ9P0W2 317 aa23.13■■□□□ 1.29
ECM1-207ENST00000498579 NOP58Q9Y2X3 529 aaKnown RBP23.13■■□□□ 1.29
ECM1-207ENST00000498579 ENTPD3O75355 529 aa23.12■■□□□ 1.29
ECM1-207ENST00000498579 LDHCP07864 332 aa23.12■■□□□ 1.29
ECM1-207ENST00000498579 NFIAQ12857 509 aa23.12■■□□□ 1.29
ECM1-207ENST00000498579 TNNI3KQ59H18 835 aa23.12■■□□□ 1.29
ECM1-207ENST00000498579 OTUD5Q96G74 571 aa23.12■■□□□ 1.29
ECM1-207ENST00000498579 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.12■■□□□ 1.29
ECM1-207ENST00000498579 FPGT-TNNI3KV9GXZ4 949 aa23.12■■□□□ 1.29
ECM1-207ENST00000498579 MROH7-TTC4A0A0A0MT08 1334 aa23.11■■□□□ 1.29
ECM1-207ENST00000498579 IGSF3O75054 1194 aa23.11■■□□□ 1.29
ECM1-207ENST00000498579 WDHD1O75717 1129 aaPredicted RBP23.11■■□□□ 1.29
ECM1-207ENST00000498579 MAP4K4O95819 1239 aaPredicted RBP23.11■■□□□ 1.29
ECM1-207ENST00000498579 MS4A4AQ96JQ5 239 aa23.11■■□□□ 1.29
ECM1-207ENST00000498579 FAM198AQ9UFP1 575 aa23.11■■□□□ 1.29
ECM1-207ENST00000498579 SNCAIPQ9Y6H5 919 aa23.11■■□□□ 1.29
ECM1-207ENST00000498579 BTDP43251 543 aa23.1■■□□□ 1.29
ECM1-207ENST00000498579 TTC39AQ5SRH9 613 aa23.1■■□□□ 1.29
ECM1-207ENST00000498579 MIGA2Q7L4E1 593 aa23.1■■□□□ 1.29
ECM1-207ENST00000498579 CHMP4BQ9H444 224 aaKnown RBP23.1■■□□□ 1.29
ECM1-207ENST00000498579 MYH13Q9UKX3 1938 aa23.1■■□□□ 1.29
ECM1-207ENST00000498579 CCL15-CCL14A0A0B4J2E2 113 aa23.09■■□□□ 1.29
ECM1-207ENST00000498579 CETPP11597 493 aa23.09■■□□□ 1.29
ECM1-207ENST00000498579 MECOMQ03112 1051 aa23.09■■□□□ 1.29
ECM1-207ENST00000498579 PPIL2Q13356 520 aa23.09■■□□□ 1.29
ECM1-207ENST00000498579 CCL15Q16663 113 aa23.09■■□□□ 1.29
ECM1-207ENST00000498579 ERC1Q8IUD2 1116 aa23.09■■□□□ 1.29
ECM1-207ENST00000498579 GPR75-ASB3A0A0A6YYF3 556 aa23.08■■□□□ 1.29
ECM1-207ENST00000498579 MCAMP43121 646 aa23.08■■□□□ 1.29
ECM1-207ENST00000498579 RGS3P49796 1198 aa23.08■■□□□ 1.29
ECM1-207ENST00000498579 PPATQ06203 517 aa23.08■■□□□ 1.29
ECM1-207ENST00000498579 SNAPC2Q13487 334 aa23.08■■□□□ 1.29
ECM1-207ENST00000498579 HSP90AB4PQ58FF6 505 aa23.08■■□□□ 1.29
ECM1-207ENST00000498579 CEP85Q6P2H3 762 aa23.08■■□□□ 1.29
ECM1-207ENST00000498579 PANK1Q8TE04 598 aa23.08■■□□□ 1.29
ECM1-207ENST00000498579 CNKSR2Q8WXI2 1034 aa23.08■■□□□ 1.29
ECM1-207ENST00000498579 ZKSCAN4Q969J2 545 aaPredicted RBP23.08■■□□□ 1.29
ECM1-207ENST00000498579 ZNF512BQ96KM6 892 aaPredicted RBP23.08■■□□□ 1.29
ECM1-207ENST00000498579 PTPN18Q99952 460 aa23.08■■□□□ 1.29
ECM1-207ENST00000498579 ZCCHC17Q9NP64 241 aaKnown RBP23.08■■□□□ 1.29
ECM1-207ENST00000498579 RAI14Q9P0K7 980 aa23.08■■□□□ 1.29
ECM1-207ENST00000498579 LRP2BPQ9P2M1 347 aa23.08■■□□□ 1.29
ECM1-207ENST00000498579 ZNF112Q9UJU3 913 aa23.08■■□□□ 1.29
ECM1-207ENST00000498579 NPM3O75607 178 aaKnown RBP23.07■■□□□ 1.28
ECM1-207ENST00000498579 CRHR2Q13324 411 aa23.07■■□□□ 1.28
ECM1-207ENST00000498579 ZSCAN29Q8IWY8 852 aaPredicted RBP23.07■■□□□ 1.28
ECM1-207ENST00000498579 BRI3BPQ8WY22 251 aa23.07■■□□□ 1.28
ECM1-207ENST00000498579 NSUN4Q96CB9 384 aaKnown RBP23.07■■□□□ 1.28
ECM1-207ENST00000498579 ERO1AQ96HE7 468 aa23.07■■□□□ 1.28
ECM1-207ENST00000498579 R3HDMLQ9H3Y0 253 aa23.07■■□□□ 1.28
ECM1-207ENST00000498579 ZFYVE28Q9HCC9 887 aa23.07■■□□□ 1.28
ECM1-207ENST00000498579 DDX19BQ9UMR2 479 aa23.07■■□□□ 1.28
ECM1-207ENST00000498579 RFX7Q2KHR2 1363 aa23.06■■□□□ 1.28
ECM1-207ENST00000498579 RGS19P49795 217 aa23.06■■□□□ 1.28
ECM1-207ENST00000498579 NOL9Q5SY16 702 aaKnown RBP23.06■■□□□ 1.28
ECM1-207ENST00000498579 FBXO46Q6PJ61 603 aaPredicted RBP23.06■■□□□ 1.28
ECM1-207ENST00000498579 PI16Q6UXB8 463 aa23.06■■□□□ 1.28
ECM1-207ENST00000498579 DBNDD2Q9BQY9 259 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms