RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 GRIN3AQ8TCU5 1115 aa5.41□□□□□ -1.54
CALD1-224ENST00000498254 MRFAP1L1Q96HT8 127 aa5.41□□□□□ -1.54
CALD1-224ENST00000498254 FERD3LQ96RJ6 166 aa5.41□□□□□ -1.54
CALD1-224ENST00000498254 SRPK1Q96SB4 655 aaKnown RBP5.41□□□□□ -1.54
CALD1-224ENST00000498254 SRRTQ9BXP5 876 aaKnown RBP5.41□□□□□ -1.54
CALD1-224ENST00000498254 KCNQ5Q9NR82 932 aa5.41□□□□□ -1.54
CALD1-224ENST00000498254 SLC6A14Q9UN76 642 aa5.41□□□□□ -1.54
CALD1-224ENST00000498254 R3HCC1Q9Y3T6 440 aaKnown RBP5.41□□□□□ -1.54
CALD1-224ENST00000498254 KRBA1A5PL33 1030 aa5.4□□□□□ -1.54
CALD1-224ENST00000498254 U2SURPO15042 1029 aaKnown RBP5.4□□□□□ -1.54
CALD1-224ENST00000498254 SMAD7O15105 426 aaKnown RBP5.4□□□□□ -1.54
CALD1-224ENST00000498254 OIP5O43482 229 aa5.4□□□□□ -1.54
CALD1-224ENST00000498254 ADH7P40394 386 aa5.4□□□□□ -1.54
CALD1-224ENST00000498254 FZD5Q13467 585 aa5.4□□□□□ -1.54
CALD1-224ENST00000498254 ZNF423Q2M1K9 1284 aa5.4□□□□□ -1.54
CALD1-224ENST00000498254 RPS26P11Q5JNZ5 115 aaPredicted RBP5.4□□□□□ -1.54
CALD1-224ENST00000498254 MPRIPQ6WCQ1 1025 aa5.4□□□□□ -1.54
CALD1-224ENST00000498254 GK5Q6ZS86 529 aa5.4□□□□□ -1.54
CALD1-224ENST00000498254 VN1R5Q7Z5H4 357 aa5.4□□□□□ -1.54
CALD1-224ENST00000498254 ALYREFQ86V81 257 aaKnown RBP5.4□□□□□ -1.54
CALD1-224ENST00000498254 TRIM42Q8IWZ5 723 aa5.4□□□□□ -1.54
CALD1-224ENST00000498254 NLGN1Q8N2Q7 840 aa5.4□□□□□ -1.54
CALD1-224ENST00000498254 ZC3H12CQ9C0D7 883 aaKnown RBP5.4□□□□□ -1.54
CALD1-224ENST00000498254 STRIP2Q9ULQ0 834 aa5.4□□□□□ -1.54
CALD1-224ENST00000498254 TBX22Q9Y458 520 aa5.4□□□□□ -1.54
CALD1-224ENST00000498254 MRPL42Q9Y6G3 142 aaKnown RBP5.4□□□□□ -1.54
CALD1-224ENST00000498254 FAM177BA6PVY3 158 aa5.39□□□□□ -1.55
CALD1-224ENST00000498254 PTPRAP18433 802 aa5.39□□□□□ -1.55
CALD1-224ENST00000498254 BMP6P22004 513 aa5.39□□□□□ -1.55
CALD1-224ENST00000498254 NME2P22392 152 aa5.39□□□□□ -1.55
CALD1-224ENST00000498254 RPS26P62854 115 aaKnown RBP5.39□□□□□ -1.55
CALD1-224ENST00000498254 SNRPNP63162 240 aaKnown RBP5.39□□□□□ -1.55
CALD1-224ENST00000498254 NFE2L2Q16236 605 aa5.39□□□□□ -1.55
CALD1-224ENST00000498254 PCSK7Q16549 785 aa5.39□□□□□ -1.55
CALD1-224ENST00000498254 ZNF746Q6NUN9 644 aaPredicted RBP5.39□□□□□ -1.55
CALD1-224ENST00000498254 LLGL2Q6P1M3 1020 aa5.39□□□□□ -1.55
CALD1-224ENST00000498254 TXNDC11Q6PKC3 985 aa5.39□□□□□ -1.55
CALD1-224ENST00000498254 NUDT8Q8WV74 236 aa5.39□□□□□ -1.55
CALD1-224ENST00000498254 GATAD2BQ8WXI9 593 aa5.39□□□□□ -1.55
CALD1-224ENST00000498254 SLC7A3Q8WY07 619 aa5.39□□□□□ -1.55
CALD1-224ENST00000498254 ST7Q9NRC1 585 aa5.39□□□□□ -1.55
CALD1-224ENST00000498254 SOX13Q9UN79 622 aa5.39□□□□□ -1.55
CALD1-224ENST00000498254 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.39□□□□□ -1.55
CALD1-224ENST00000498254 SAMM50Q9Y512 469 aa5.39□□□□□ -1.55
CALD1-224ENST00000498254 NEURL1BA8MQ27 555 aa5.38□□□□□ -1.55
CALD1-224ENST00000498254 KLF4O43474 513 aa5.38□□□□□ -1.55
CALD1-224ENST00000498254 GRIN3BO60391 1043 aa5.38□□□□□ -1.55
CALD1-224ENST00000498254 SIN3BO75182 1162 aa5.38□□□□□ -1.55
CALD1-224ENST00000498254 BPNT1O95861 308 aa5.38□□□□□ -1.55
CALD1-224ENST00000498254 B3GALT4O96024 378 aa5.38□□□□□ -1.55
CALD1-224ENST00000498254 EPHA1P21709 976 aa5.38□□□□□ -1.55
CALD1-224ENST00000498254 MAP2K3P46734 347 aa5.38□□□□□ -1.55
CALD1-224ENST00000498254 EIF6P56537 245 aaKnown RBP5.38□□□□□ -1.55
CALD1-224ENST00000498254 PTPN11Q06124 597 aaPredicted RBP5.38□□□□□ -1.55
CALD1-224ENST00000498254 SERINC3Q13530 473 aa5.38□□□□□ -1.55
CALD1-224ENST00000498254 COL9A2Q14055 689 aaPredicted RBP5.38□□□□□ -1.55
CALD1-224ENST00000498254 RAB33AQ14088 237 aa5.38□□□□□ -1.55
CALD1-224ENST00000498254 CWF19L2Q2TBE0 894 aaKnown RBP5.38□□□□□ -1.55
CALD1-224ENST00000498254 HGSNATQ68CP4 663 aa5.38□□□□□ -1.55
CALD1-224ENST00000498254 PSAPL1Q6NUJ1 521 aa5.38□□□□□ -1.55
CALD1-224ENST00000498254 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.38□□□□□ -1.55
CALD1-224ENST00000498254 SLITRK4Q8IW52 837 aa5.38□□□□□ -1.55
CALD1-224ENST00000498254 FAM169BQ8N8A8 192 aa5.38□□□□□ -1.55
CALD1-224ENST00000498254 SHDQ96IW2 340 aa5.38□□□□□ -1.55
CALD1-224ENST00000498254 LPIN3Q9BQK8 851 aa5.38□□□□□ -1.55
CALD1-224ENST00000498254 BRMS1Q9HCU9 246 aa5.38□□□□□ -1.55
CALD1-224ENST00000498254 PRKAG3Q9UGI9 489 aa5.38□□□□□ -1.55
CALD1-224ENST00000498254 KLF15Q9UIH9 416 aa5.38□□□□□ -1.55
CALD1-224ENST00000498254 MKL2Q9ULH7 1088 aa5.38□□□□□ -1.55
CALD1-224ENST00000498254 FAM221AA4D161 298 aa5.37□□□□□ -1.55
CALD1-224ENST00000498254 TRIM37O94972 964 aa5.37□□□□□ -1.55
CALD1-224ENST00000498254 ESRRAP11474 423 aaPredicted RBP5.37□□□□□ -1.55
CALD1-224ENST00000498254 TXKP42681 527 aa5.37□□□□□ -1.55
CALD1-224ENST00000498254 CDK8P49336 464 aa5.37□□□□□ -1.55
CALD1-224ENST00000498254 CLCQ05315 142 aa5.37□□□□□ -1.55
CALD1-224ENST00000498254 IKBKEQ14164 716 aa5.37□□□□□ -1.55
CALD1-224ENST00000498254 MPP2Q14168 576 aa5.37□□□□□ -1.55
CALD1-224ENST00000498254 TCEAL1Q15170 157 aa5.37□□□□□ -1.55
CALD1-224ENST00000498254 NBPF6Q5VWK0 638 aa5.37□□□□□ -1.55
CALD1-224ENST00000498254 MAP1SQ66K74 1059 aaPredicted RBP5.37□□□□□ -1.55
CALD1-224ENST00000498254 CELF2-AS1Q8N7Q2 184 aa5.37□□□□□ -1.55
CALD1-224ENST00000498254 KCNB2Q92953 911 aa5.37□□□□□ -1.55
CALD1-224ENST00000498254 GAL3ST3Q96A11 431 aa5.37□□□□□ -1.55
CALD1-224ENST00000498254 NBPF4Q96M43 638 aa5.37□□□□□ -1.55
CALD1-224ENST00000498254 CRBNQ96SW2 442 aa5.37□□□□□ -1.55
CALD1-224ENST00000498254 SNTG2Q9NY99 539 aa5.37□□□□□ -1.55
CALD1-224ENST00000498254 FAM221BA6H8Z2 402 aa5.36□□□□□ -1.55
CALD1-224ENST00000498254 NCLP19338 710 aaKnown RBP5.36□□□□□ -1.55
CALD1-224ENST00000498254 ARNTP27540 789 aa5.36□□□□□ -1.55
CALD1-224ENST00000498254 ADH6P28332 368 aa5.36□□□□□ -1.55
CALD1-224ENST00000498254 CDC27P30260 824 aa5.36□□□□□ -1.55
CALD1-224ENST00000498254 ZNF165P49910 485 aa5.36□□□□□ -1.55
CALD1-224ENST00000498254 GSTM4Q03013 218 aa5.36□□□□□ -1.55
CALD1-224ENST00000498254 LRRC14Q15048 493 aa5.36□□□□□ -1.55
CALD1-224ENST00000498254 PPP2R5EQ16537 467 aa5.36□□□□□ -1.55
CALD1-224ENST00000498254 LARP1BQ659C4 914 aaKnown RBP5.36□□□□□ -1.55
CALD1-224ENST00000498254 REC114Q7Z4M0 266 aa5.36□□□□□ -1.55
CALD1-224ENST00000498254 FCHSD1Q86WN1 690 aa5.36□□□□□ -1.55
CALD1-224ENST00000498254 TNFRSF25Q93038 417 aa5.36□□□□□ -1.55
CALD1-224ENST00000498254 ACSBG1Q96GR2 724 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms