RNA–Protein interactions for RNA: ENST00000497784.1

BRAF-205, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

TSL 5

Gene BRAF, Length 2,336 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-205ENST00000497784 PRDM12Q9H4Q4 367 aa11.11□□□□□ -0.63
BRAF-205ENST00000497784 MSCO60682 206 aa11.1□□□□□ -0.63
BRAF-205ENST00000497784 PKN1Q16512 942 aa11.1□□□□□ -0.63
BRAF-205ENST00000497784 FAM110CQ1W6H9 321 aa11.1□□□□□ -0.63
BRAF-205ENST00000497784 NOL9Q5SY16 702 aaKnown RBP11.1□□□□□ -0.63
BRAF-205ENST00000497784 C1orf53Q5VUE5 145 aa11.1□□□□□ -0.63
BRAF-205ENST00000497784 LHX8Q68G74 356 aa11.1□□□□□ -0.63
BRAF-205ENST00000497784 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.1□□□□□ -0.63
BRAF-205ENST00000497784 ZNF341Q9BYN7 854 aa11.1□□□□□ -0.63
BRAF-205ENST00000497784 RTN4Q9NQC3 1192 aaKnown RBP11.1□□□□□ -0.63
BRAF-205ENST00000497784 IRS4O14654 1257 aaPredicted RBP11.1□□□□□ -0.63
BRAF-205ENST00000497784 GTF2IP78347 998 aa11.1□□□□□ -0.63
BRAF-205ENST00000497784 ADGRE1Q14246 886 aa11.1□□□□□ -0.63
BRAF-205ENST00000497784 GJD2Q9UKL4 321 aa11.1□□□□□ -0.63
BRAF-205ENST00000497784 TAOK2Q9UL54 1235 aa11.1□□□□□ -0.63
BRAF-205ENST00000497784 BDP1A6H8Y1 2624 aa11.1□□□□□ -0.63
BRAF-205ENST00000497784 SNX17Q15036 470 aa11.09□□□□□ -0.63
BRAF-205ENST00000497784 CCDC85BQ15834 202 aaPredicted RBP11.09□□□□□ -0.63
BRAF-205ENST00000497784 WRNIP1Q96S55 665 aa11.09□□□□□ -0.63
BRAF-205ENST00000497784 DNM1LO00429 736 aa11.09□□□□□ -0.63
BRAF-205ENST00000497784 CCT4P50991 539 aaKnown RBP11.09□□□□□ -0.63
BRAF-205ENST00000497784 KCNQ1P51787 676 aa11.09□□□□□ -0.63
BRAF-205ENST00000497784 CDC5LQ99459 802 aaKnown RBP11.09□□□□□ -0.63
BRAF-205ENST00000497784 SENP6Q9GZR1 1112 aaPredicted RBP11.09□□□□□ -0.63
BRAF-205ENST00000497784 SERPINA10Q9UK55 444 aa11.09□□□□□ -0.63
BRAF-205ENST00000497784 LRRC37A2A6NM11 1700 aa11.09□□□□□ -0.63
BRAF-205ENST00000497784 PRKAR2AP13861 404 aaKnown RBP11.08□□□□□ -0.64
BRAF-205ENST00000497784 IGFBP4P22692 258 aa11.08□□□□□ -0.64
BRAF-205ENST00000497784 PDIA6Q15084 440 aa11.08□□□□□ -0.64
BRAF-205ENST00000497784 FKBP1CQ5VVH2 108 aa11.08□□□□□ -0.64
BRAF-205ENST00000497784 SLC4A2P04920 1241 aa11.08□□□□□ -0.64
BRAF-205ENST00000497784 GCLCP48506 637 aaPredicted RBP11.08□□□□□ -0.64
BRAF-205ENST00000497784 C15orf52Q6ZUT6 534 aaKnown RBP11.08□□□□□ -0.64
BRAF-205ENST00000497784 BSDC1Q9NW68 430 aaPredicted RBP11.08□□□□□ -0.64
BRAF-205ENST00000497784 MSRAQ9UJ68 235 aa11.08□□□□□ -0.64
BRAF-205ENST00000497784 ZNF112Q9UJU3 913 aa11.08□□□□□ -0.64
BRAF-205ENST00000497784 CYP2C8P10632 490 aa11.07□□□□□ -0.64
BRAF-205ENST00000497784 FAM83AQ86UY5 434 aa11.07□□□□□ -0.64
BRAF-205ENST00000497784 SOCS4Q8WXH5 440 aa11.07□□□□□ -0.64
BRAF-205ENST00000497784 UIMC1Q96RL1 719 aa11.07□□□□□ -0.64
BRAF-205ENST00000497784 ANKRD2Q9GZV1 360 aa11.07□□□□□ -0.64
BRAF-205ENST00000497784 PNMA3Q9UL41 463 aa11.07□□□□□ -0.64
BRAF-205ENST00000497784 TCF20Q9UGU0 1960 aaKnown RBP11.07□□□□□ -0.64
BRAF-205ENST00000497784 GFRA3O60609 400 aa11.07□□□□□ -0.64
BRAF-205ENST00000497784 FAM89AQ96GI7 184 aa11.07□□□□□ -0.64
BRAF-205ENST00000497784 PDLIM7Q9NR12 457 aa11.07□□□□□ -0.64
BRAF-205ENST00000497784 KHSRPQ92945 711 aaKnown RBP eCLIP11.06□□□□□ -0.641e-6■■■■□ 24
BRAF-205ENST00000497784 SEC31BQ9NQW1 1179 aa11.06□□□□□ -0.64
BRAF-205ENST00000497784 A0A0G2JLL6 359 aaPredicted RBP11.06□□□□□ -0.64
BRAF-205ENST00000497784 KRT37O76014 449 aa11.06□□□□□ -0.64
BRAF-205ENST00000497784 FPGSQ05932 587 aa11.06□□□□□ -0.64
BRAF-205ENST00000497784 SLC39A5Q6ZMH5 540 aa11.06□□□□□ -0.64
BRAF-205ENST00000497784 PRRT2Q7Z6L0 340 aaPredicted RBP11.06□□□□□ -0.64
BRAF-205ENST00000497784 CERS5Q8N5B7 392 aa11.06□□□□□ -0.64
BRAF-205ENST00000497784 PLBD2Q8NHP8 589 aa11.06□□□□□ -0.64
BRAF-205ENST00000497784 TRIB2Q92519 343 aa11.06□□□□□ -0.64
BRAF-205ENST00000497784 ZKSCAN4Q969J2 545 aaPredicted RBP11.06□□□□□ -0.64
BRAF-205ENST00000497784 ATP11BQ9Y2G3 1177 aa11.06□□□□□ -0.64
BRAF-205ENST00000497784 TACC3Q9Y6A5 838 aa11.06□□□□□ -0.64
BRAF-205ENST00000497784 KIAA0355O15063 1070 aa11.05□□□□□ -0.64
BRAF-205ENST00000497784 TFF2Q03403 129 aa11.05□□□□□ -0.64
BRAF-205ENST00000497784 TRIM32Q13049 653 aa11.05□□□□□ -0.64
BRAF-205ENST00000497784 MCM10Q7L590 875 aa11.05□□□□□ -0.64
BRAF-205ENST00000497784 SMCR8Q8TEV9 937 aaPredicted RBP11.05□□□□□ -0.64
BRAF-205ENST00000497784 LPAR1Q92633 364 aa11.05□□□□□ -0.64
BRAF-205ENST00000497784 CD209Q9NNX6 404 aa11.05□□□□□ -0.64
BRAF-205ENST00000497784 MINPP1Q9UNW1 487 aa11.05□□□□□ -0.64
BRAF-205ENST00000497784 PDE8AO60658 829 aa11.04□□□□□ -0.64
BRAF-205ENST00000497784 RBM5P52756 815 aaKnown RBP eCLIP11.04□□□□□ -0.64
BRAF-205ENST00000497784 RASIP1Q5U651 963 aa11.04□□□□□ -0.64
BRAF-205ENST00000497784 TDRD7Q8NHU6 1098 aaKnown RBP11.04□□□□□ -0.64
BRAF-205ENST00000497784 PANK3Q9H999 370 aa11.04□□□□□ -0.64
BRAF-205ENST00000497784 SPINK5Q9NQ38 1064 aaPredicted RBP11.04□□□□□ -0.64
BRAF-205ENST00000497784 LAMA3Q16787 3333 aa11.04□□□□□ -0.64
BRAF-205ENST00000497784 ZKSCAN1P17029 563 aaPredicted RBP11.04□□□□□ -0.64
BRAF-205ENST00000497784 ARRDC4Q8NCT1 418 aa11.04□□□□□ -0.64
BRAF-205ENST00000497784 TMEM39BQ9GZU3 492 aa11.04□□□□□ -0.64
BRAF-205ENST00000497784 HDLBPQ00341 1268 aaKnown RBP11.03□□□□□ -0.64
BRAF-205ENST00000497784 CACNB2Q08289 660 aaPredicted RBP11.03□□□□□ -0.64
BRAF-205ENST00000497784 XAGE3Q8WTP9 111 aa11.03□□□□□ -0.64
BRAF-205ENST00000497784 HLA-CQ95604 372 aa11.03□□□□□ -0.64
BRAF-205ENST00000497784 NUDT12Q9BQG2 462 aa11.03□□□□□ -0.64
BRAF-205ENST00000497784 PBX4Q9BYU1 374 aa11.03□□□□□ -0.64
BRAF-205ENST00000497784 PRDM5Q9NQX1 630 aaPredicted RBP11.03□□□□□ -0.64
BRAF-205ENST00000497784 GTPBP6O43824 516 aaPredicted RBP11.03□□□□□ -0.64
BRAF-205ENST00000497784 IL1R1P14778 569 aa11.03□□□□□ -0.64
BRAF-205ENST00000497784 GJD3Q8N144 294 aa11.03□□□□□ -0.64
BRAF-205ENST00000497784 PHACTR3Q96KR7 559 aa11.03□□□□□ -0.64
BRAF-205ENST00000497784 KNSTRNQ9Y448 316 aa11.03□□□□□ -0.64
BRAF-205ENST00000497784 SLC5A1P13866 664 aa11.02□□□□□ -0.64
BRAF-205ENST00000497784 PCDHAC2Q9Y5I4 1007 aa11.02□□□□□ -0.64
BRAF-205ENST00000497784 BRCA2P51587 3418 aa11.02□□□□□ -0.65
BRAF-205ENST00000497784 POTEB3A0JP26 581 aa11.02□□□□□ -0.65
BRAF-205ENST00000497784 TRIM43BA6NCK2 446 aa11.02□□□□□ -0.65
BRAF-205ENST00000497784 U2SURPO15042 1029 aaKnown RBP11.02□□□□□ -0.65
BRAF-205ENST00000497784 DCXO43602 365 aa11.02□□□□□ -0.65
BRAF-205ENST00000497784 PRKAR2BP31323 418 aa11.02□□□□□ -0.65
BRAF-205ENST00000497784 ID4P47928 161 aa11.02□□□□□ -0.65
BRAF-205ENST00000497784 POTEBQ6S5H4 581 aa11.02□□□□□ -0.65
BRAF-205ENST00000497784 TRIM43Q96BQ3 446 aaPredicted RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms