RNA–Protein interactions for RNA: ENST00000495755.1

VPS52-221, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-221ENST00000495755 NEUROD6Q96NK8 337 aa8.92□□□□□ -0.98
VPS52-221ENST00000495755 R3HDMLQ9H3Y0 253 aa8.92□□□□□ -0.98
VPS52-221ENST00000495755 ELP3Q9H9T3 547 aa8.92□□□□□ -0.98
VPS52-221ENST00000495755 GPR108Q9NPR9 543 aa8.92□□□□□ -0.98
VPS52-221ENST00000495755 USP40Q9NVE5 1235 aa8.92□□□□□ -0.98
VPS52-221ENST00000495755 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.92□□□□□ -0.98
VPS52-221ENST00000495755 RPAP1Q9BWH6 1393 aaPredicted RBP8.91□□□□□ -0.98
VPS52-221ENST00000495755 GAKO14976 1311 aa8.91□□□□□ -0.98
VPS52-221ENST00000495755 GPR25O00155 361 aa8.91□□□□□ -0.98
VPS52-221ENST00000495755 IGF2BP3O00425 579 aaKnown RBP eCLIP8.91□□□□□ -0.98
VPS52-221ENST00000495755 TNRC18O15417 2968 aaPredicted RBP8.91□□□□□ -0.98
VPS52-221ENST00000495755 ALDH1A1P00352 501 aa8.91□□□□□ -0.98
VPS52-221ENST00000495755 NFIAQ12857 509 aa8.91□□□□□ -0.98
VPS52-221ENST00000495755 VGLL4Q14135 290 aa8.91□□□□□ -0.98
VPS52-221ENST00000495755 CTU1Q7Z7A3 348 aaKnown RBP8.91□□□□□ -0.98
VPS52-221ENST00000495755 ITPRIPQ8IWB1 547 aa8.91□□□□□ -0.98
VPS52-221ENST00000495755 ZNF296Q8WUU4 475 aaPredicted RBP8.91□□□□□ -0.98
VPS52-221ENST00000495755 CNKSR2Q8WXI2 1034 aa8.91□□□□□ -0.98
VPS52-221ENST00000495755 OPTNQ96CV9 577 aa8.91□□□□□ -0.98
VPS52-221ENST00000495755 HOOK2Q96ED9 719 aa8.91□□□□□ -0.98
VPS52-221ENST00000495755 MS4A4AQ96JQ5 239 aa8.91□□□□□ -0.98
VPS52-221ENST00000495755 PTPN18Q99952 460 aa8.91□□□□□ -0.98
VPS52-221ENST00000495755 C1orf115Q9H7X2 142 aa8.91□□□□□ -0.98
VPS52-221ENST00000495755 HMG20BQ9P0W2 317 aa8.91□□□□□ -0.98
VPS52-221ENST00000495755 FAM198AQ9UFP1 575 aa8.91□□□□□ -0.98
VPS52-221ENST00000495755 NOP58Q9Y2X3 529 aaKnown RBP8.91□□□□□ -0.98
VPS52-221ENST00000495755 MYH13Q9UKX3 1938 aa8.9□□□□□ -0.98
VPS52-221ENST00000495755 CCDC85CA6NKD9 419 aa8.9□□□□□ -0.98
VPS52-221ENST00000495755 SURF6O75683 361 aaKnown RBP8.9□□□□□ -0.98
VPS52-221ENST00000495755 ARID4AP29374 1257 aaPredicted RBP8.9□□□□□ -0.98
VPS52-221ENST00000495755 GORABQ5T7V8 394 aa8.9□□□□□ -0.98
VPS52-221ENST00000495755 SPTY2D1Q68D10 685 aaPredicted RBP8.9□□□□□ -0.98
VPS52-221ENST00000495755 PI16Q6UXB8 463 aa8.9□□□□□ -0.98
VPS52-221ENST00000495755 DZIP1Q86YF9 867 aaKnown RBP8.9□□□□□ -0.98
VPS52-221ENST00000495755 ZFPM1Q8IX07 1006 aa8.9□□□□□ -0.98
VPS52-221ENST00000495755 SPATA5Q8NB90 893 aa8.9□□□□□ -0.98
VPS52-221ENST00000495755 PANK1Q8TE04 598 aa8.9□□□□□ -0.98
VPS52-221ENST00000495755 ZNF384Q8TF68 577 aa8.9□□□□□ -0.98
VPS52-221ENST00000495755 ZKSCAN4Q969J2 545 aaPredicted RBP8.9□□□□□ -0.98
VPS52-221ENST00000495755 IDI2Q9BXS1 227 aa8.9□□□□□ -0.98
VPS52-221ENST00000495755 ABCF2Q9UG63 623 aa8.9□□□□□ -0.98
VPS52-221ENST00000495755 ZNF112Q9UJU3 913 aa8.9□□□□□ -0.98
VPS52-221ENST00000495755 CSADQ9Y600 493 aa8.9□□□□□ -0.98
VPS52-221ENST00000495755 SNCAIPQ9Y6H5 919 aa8.9□□□□□ -0.98
VPS52-221ENST00000495755 LAMB1P07942 1786 aa8.89□□□□□ -0.99
VPS52-221ENST00000495755 GPR75-ASB3A0A0A6YYF3 556 aa8.89□□□□□ -0.99
VPS52-221ENST00000495755 SPDYE5A6NIY4 337 aa8.89□□□□□ -0.99
VPS52-221ENST00000495755 FKTNO75072 461 aa8.89□□□□□ -0.99
VPS52-221ENST00000495755 ENTPD3O75355 529 aa8.89□□□□□ -0.99
VPS52-221ENST00000495755 UQCRFS1P1P0C7P4 283 aa8.89□□□□□ -0.99
VPS52-221ENST00000495755 RGS19P49795 217 aa8.89□□□□□ -0.99
VPS52-221ENST00000495755 MECOMQ03112 1051 aa8.89□□□□□ -0.99
VPS52-221ENST00000495755 TCP10Q12799 353 aa8.89□□□□□ -0.99
VPS52-221ENST00000495755 TNNI3KQ59H18 835 aa8.89□□□□□ -0.99
VPS52-221ENST00000495755 DCAF15Q66K64 600 aa8.89□□□□□ -0.99
VPS52-221ENST00000495755 CEP85Q6P2H3 762 aa8.89□□□□□ -0.99
VPS52-221ENST00000495755 TBC1D9Q6ZT07 1266 aa8.89□□□□□ -0.99
VPS52-221ENST00000495755 ERICH6Q7L0X2 663 aa8.89□□□□□ -0.99
VPS52-221ENST00000495755 MIGA2Q7L4E1 593 aa8.89□□□□□ -0.99
VPS52-221ENST00000495755 SLF2Q8IX21 1173 aa8.89□□□□□ -0.99
VPS52-221ENST00000495755 BRI3BPQ8WY22 251 aa8.89□□□□□ -0.99
VPS52-221ENST00000495755 WRNIP1Q96S55 665 aa8.89□□□□□ -0.99
VPS52-221ENST00000495755 ZNF341Q9BYN7 854 aa8.89□□□□□ -0.99
VPS52-221ENST00000495755 FPGT-TNNI3KV9GXZ4 949 aa8.89□□□□□ -0.99
VPS52-221ENST00000495755 OTOFQ9HC10 1997 aa8.89□□□□□ -0.99
VPS52-221ENST00000495755 RFX7Q2KHR2 1363 aa8.88□□□□□ -0.99
VPS52-221ENST00000495755 MROH7-TTC4A0A0A0MT08 1334 aa8.88□□□□□ -0.99
VPS52-221ENST00000495755 WDHD1O75717 1129 aaPredicted RBP8.88□□□□□ -0.99
VPS52-221ENST00000495755 MS4A1P11836 297 aa8.88□□□□□ -0.99
VPS52-221ENST00000495755 INPP5BP32019 993 aa8.88□□□□□ -0.99
VPS52-221ENST00000495755 MCAMP43121 646 aa8.88□□□□□ -0.99
VPS52-221ENST00000495755 BTDP43251 543 aa8.88□□□□□ -0.99
VPS52-221ENST00000495755 RGS3P49796 1198 aa8.88□□□□□ -0.99
VPS52-221ENST00000495755 GTF2A2P52657 109 aa8.88□□□□□ -0.99
VPS52-221ENST00000495755 MAP3K10Q02779 954 aa8.88□□□□□ -0.99
VPS52-221ENST00000495755 CRHR2Q13324 411 aa8.88□□□□□ -0.99
VPS52-221ENST00000495755 PKN2Q16513 984 aaKnown RBP8.88□□□□□ -0.99
VPS52-221ENST00000495755 OTUD7BQ6GQQ9 843 aa8.88□□□□□ -0.99
VPS52-221ENST00000495755 SH3BP5LQ7L8J4 393 aa8.88□□□□□ -0.99
VPS52-221ENST00000495755 ERO1BQ86YB8 467 aa8.88□□□□□ -0.99
VPS52-221ENST00000495755 NSUN4Q96CB9 384 aaKnown RBP8.88□□□□□ -0.99
VPS52-221ENST00000495755 OTUD5Q96G74 571 aa8.88□□□□□ -0.99
VPS52-221ENST00000495755 ZNF512BQ96KM6 892 aaPredicted RBP8.88□□□□□ -0.99
VPS52-221ENST00000495755 DBNDD2Q9BQY9 259 aa8.88□□□□□ -0.99
VPS52-221ENST00000495755 CENPFP49454 3210 aa8.88□□□□□ -0.99
VPS52-221ENST00000495755 ATRNL1Q5VV63 1379 aa8.87□□□□□ -0.99
VPS52-221ENST00000495755 CCL15-CCL14A0A0B4J2E2 113 aa8.87□□□□□ -0.99
VPS52-221ENST00000495755 PHF20L1A8MW92 1017 aa8.87□□□□□ -0.99
VPS52-221ENST00000495755 IRF6O14896 467 aa8.87□□□□□ -0.99
VPS52-221ENST00000495755 NPM3O75607 178 aaKnown RBP8.87□□□□□ -0.99
VPS52-221ENST00000495755 MAP4K4O95819 1239 aaPredicted RBP8.87□□□□□ -0.99
VPS52-221ENST00000495755 LDHCP07864 332 aa8.87□□□□□ -0.99
VPS52-221ENST00000495755 RHBDL3P58872 404 aa8.87□□□□□ -0.99
VPS52-221ENST00000495755 GSTO1P78417 241 aa8.87□□□□□ -0.99
VPS52-221ENST00000495755 PPATQ06203 517 aa8.87□□□□□ -0.99
VPS52-221ENST00000495755 PPIL2Q13356 520 aa8.87□□□□□ -0.99
VPS52-221ENST00000495755 OS9Q13438 667 aaPredicted RBP8.87□□□□□ -0.99
VPS52-221ENST00000495755 CCL15Q16663 113 aa8.87□□□□□ -0.99
VPS52-221ENST00000495755 CCDC158Q5M9N0 1113 aa8.87□□□□□ -0.99
VPS52-221ENST00000495755 EAF2Q96CJ1 260 aaPredicted RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms