RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 RAI14Q9P0K7 980 aa21.62■■□□□ 1.05
HDAC4-211ENST00000494800 LRP2BPQ9P2M1 347 aa21.62■■□□□ 1.05
HDAC4-211ENST00000494800 SSC5DA1L4H1 1573 aa21.61■■□□□ 1.05
HDAC4-211ENST00000494800 RAB11FIP3O75154 756 aa21.61■■□□□ 1.05
HDAC4-211ENST00000494800 LDHCP07864 332 aa21.61■■□□□ 1.05
HDAC4-211ENST00000494800 HSPA8P11142 646 aaKnown RBP21.61■■□□□ 1.05
HDAC4-211ENST00000494800 LBX1P52954 281 aa21.61■■□□□ 1.05
HDAC4-211ENST00000494800 COL13A1Q5TAT6 717 aaPredicted RBP21.61■■□□□ 1.05
HDAC4-211ENST00000494800 CDC42EP5Q6NZY7 148 aa21.61■■□□□ 1.05
HDAC4-211ENST00000494800 ANKRD13AQ8IZ07 590 aa21.61■■□□□ 1.05
HDAC4-211ENST00000494800 KIF1BPQ96EK5 621 aa21.61■■□□□ 1.05
HDAC4-211ENST00000494800 TEPSINQ96N21 525 aa21.61■■□□□ 1.05
HDAC4-211ENST00000494800 ZIC5Q96T25 663 aa21.61■■□□□ 1.05
HDAC4-211ENST00000494800 MECOMQ03112 1051 aa21.6■■□□□ 1.05
HDAC4-211ENST00000494800 PI16Q6UXB8 463 aa21.6■■□□□ 1.05
HDAC4-211ENST00000494800 AACSQ86V21 672 aa21.6■■□□□ 1.05
HDAC4-211ENST00000494800 CLASRPQ8N2M8 674 aaKnown RBP21.6■■□□□ 1.05
HDAC4-211ENST00000494800 RHPN1Q8TCX5 695 aa21.6■■□□□ 1.05
HDAC4-211ENST00000494800 FAM151AQ8WW52 585 aa21.6■■□□□ 1.05
HDAC4-211ENST00000494800 EAF2Q96CJ1 260 aaPredicted RBP21.6■■□□□ 1.05
HDAC4-211ENST00000494800 FAM163AQ96GL9 167 aaPredicted RBP21.6■■□□□ 1.05
HDAC4-211ENST00000494800 CCDC8Q9H0W5 538 aaPredicted RBP21.6■■□□□ 1.05
HDAC4-211ENST00000494800 SAGE1Q9NXZ1 904 aa21.6■■□□□ 1.05
HDAC4-211ENST00000494800 DBNLQ9UJU6 430 aaKnown RBP21.6■■□□□ 1.05
HDAC4-211ENST00000494800 FZD1Q9UP38 647 aa21.6■■□□□ 1.05
HDAC4-211ENST00000494800 RPAP1Q9BWH6 1393 aaPredicted RBP21.6■■□□□ 1.05
HDAC4-211ENST00000494800 MROH7-TTC4A0A0A0MT08 1334 aa21.59■■□□□ 1.05
HDAC4-211ENST00000494800 GAKO14976 1311 aa21.59■■□□□ 1.05
HDAC4-211ENST00000494800 IGSF3O75054 1194 aa21.59■■□□□ 1.05
HDAC4-211ENST00000494800 USP2O75604 605 aaPredicted RBP21.59■■□□□ 1.05
HDAC4-211ENST00000494800 SREBF2Q12772 1141 aa21.59■■□□□ 1.05
HDAC4-211ENST00000494800 DCAF15Q66K64 600 aa21.59■■□□□ 1.05
HDAC4-211ENST00000494800 APBB1O00213 710 aa21.58■■□□□ 1.05
HDAC4-211ENST00000494800 TBC1D9Q6ZT07 1266 aa21.58■■□□□ 1.05
HDAC4-211ENST00000494800 SIRT2Q8IXJ6 389 aa21.58■■□□□ 1.05
HDAC4-211ENST00000494800 CSRNP1Q96S65 589 aa21.58■■□□□ 1.05
HDAC4-211ENST00000494800 NOL10Q9BSC4 688 aaKnown RBP21.58■■□□□ 1.05
HDAC4-211ENST00000494800 SNRKQ9NRH2 765 aa21.58■■□□□ 1.05
HDAC4-211ENST00000494800 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.58■■□□□ 1.05
HDAC4-211ENST00000494800 ZBTB48P10074 688 aaPredicted RBP21.57■■□□□ 1.04
HDAC4-211ENST00000494800 BTDP43251 543 aa21.57■■□□□ 1.04
HDAC4-211ENST00000494800 RRP1P56182 461 aaKnown RBP21.57■■□□□ 1.04
HDAC4-211ENST00000494800 TCP10Q12799 353 aa21.57■■□□□ 1.04
HDAC4-211ENST00000494800 SPRYD7Q5W111 196 aa21.57■■□□□ 1.04
HDAC4-211ENST00000494800 TNS4Q8IZW8 715 aa21.57■■□□□ 1.04
HDAC4-211ENST00000494800 NSUN4Q96CB9 384 aaKnown RBP21.57■■□□□ 1.04
HDAC4-211ENST00000494800 IL1RAPL2Q9NP60 686 aa21.57■■□□□ 1.04
HDAC4-211ENST00000494800 TLR7Q9NYK1 1049 aaKnown RBP21.57■■□□□ 1.04
HDAC4-211ENST00000494800 CSADQ9Y600 493 aa21.57■■□□□ 1.04
HDAC4-211ENST00000494800 MAP4K4O95819 1239 aaPredicted RBP21.56■■□□□ 1.04
HDAC4-211ENST00000494800 IFIT2P09913 472 aaKnown RBP21.56■■□□□ 1.04
HDAC4-211ENST00000494800 MKRN3Q13064 507 aaKnown RBP21.56■■□□□ 1.04
HDAC4-211ENST00000494800 CDAN1Q8IWY9 1227 aa21.56■■□□□ 1.04
HDAC4-211ENST00000494800 GPR75-ASB3A0A0A6YYF3 556 aa21.55■■□□□ 1.04
HDAC4-211ENST00000494800 MAP3K9P80192 1104 aa21.55■■□□□ 1.04
HDAC4-211ENST00000494800 CLMNQ96JQ2 1002 aa21.55■■□□□ 1.04
HDAC4-211ENST00000494800 IDI2Q9BXS1 227 aa21.55■■□□□ 1.04
HDAC4-211ENST00000494800 TSKSQ9UJT2 592 aa21.55■■□□□ 1.04
HDAC4-211ENST00000494800 MANSC4A6NHS7 340 aaPredicted RBP21.54■■□□□ 1.04
HDAC4-211ENST00000494800 ENTPD3O75355 529 aa21.54■■□□□ 1.04
HDAC4-211ENST00000494800 TRPA1O75762 1119 aa21.54■■□□□ 1.04
HDAC4-211ENST00000494800 BAG3O95817 575 aa21.54■■□□□ 1.04
HDAC4-211ENST00000494800 INHBEP58166 350 aa21.54■■□□□ 1.04
HDAC4-211ENST00000494800 NFIAQ12857 509 aa21.54■■□□□ 1.04
HDAC4-211ENST00000494800 NAA16Q6N069 864 aaPredicted RBP21.54■■□□□ 1.04
HDAC4-211ENST00000494800 WNK4Q96J92 1243 aa21.54■■□□□ 1.04
HDAC4-211ENST00000494800 ZNF341Q9BYN7 854 aa21.54■■□□□ 1.04
HDAC4-211ENST00000494800 RNF186Q9NXI6 227 aa21.54■■□□□ 1.04
HDAC4-211ENST00000494800 CYP2E1P05181 493 aaPredicted RBP21.53■■□□□ 1.04
HDAC4-211ENST00000494800 ZAP70P43403 619 aa21.53■■□□□ 1.04
HDAC4-211ENST00000494800 TM4SF4P48230 202 aa21.53■■□□□ 1.04
HDAC4-211ENST00000494800 RGS3P49796 1198 aa21.53■■□□□ 1.04
HDAC4-211ENST00000494800 ZSCAN29Q8IWY8 852 aaPredicted RBP21.53■■□□□ 1.04
HDAC4-211ENST00000494800 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.53■■□□□ 1.04
HDAC4-211ENST00000494800 WRNIP1Q96S55 665 aa21.53■■□□□ 1.04
HDAC4-211ENST00000494800 BCL11AQ9H165 835 aa21.53■■□□□ 1.04
HDAC4-211ENST00000494800 ELP3Q9H9T3 547 aa21.53■■□□□ 1.04
HDAC4-211ENST00000494800 FAM198AQ9UFP1 575 aa21.53■■□□□ 1.04
HDAC4-211ENST00000494800 LRRCC1Q9C099 1032 aa21.52■■□□□ 1.04
HDAC4-211ENST00000494800 MYH2Q9UKX2 1941 aa21.52■■□□□ 1.04
HDAC4-211ENST00000494800 PLCG2P16885 1265 aa21.51■■□□□ 1.03
HDAC4-211ENST00000494800 PICALMQ13492 652 aa21.51■■□□□ 1.03
HDAC4-211ENST00000494800 VGLL4Q14135 290 aa21.51■■□□□ 1.03
HDAC4-211ENST00000494800 TMED8Q6PL24 325 aaPredicted RBP21.51■■□□□ 1.03
HDAC4-211ENST00000494800 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.51■■□□□ 1.03
HDAC4-211ENST00000494800 OPTNQ96CV9 577 aa21.51■■□□□ 1.03
HDAC4-211ENST00000494800 IDH1O75874 414 aaKnown RBP21.5■■□□□ 1.03
HDAC4-211ENST00000494800 ALDH1A1P00352 501 aa21.5■■□□□ 1.03
HDAC4-211ENST00000494800 TTF1Q15361 905 aaPredicted RBP21.5■■□□□ 1.03
HDAC4-211ENST00000494800 MIGA2Q7L4E1 593 aa21.5■■□□□ 1.03
HDAC4-211ENST00000494800 ZNF384Q8TF68 577 aa21.5■■□□□ 1.03
HDAC4-211ENST00000494800 NPM3O75607 178 aaKnown RBP21.49■■□□□ 1.03
HDAC4-211ENST00000494800 WDHD1O75717 1129 aaPredicted RBP21.49■■□□□ 1.03
HDAC4-211ENST00000494800 MAP3K12Q12852 859 aa21.49■■□□□ 1.03
HDAC4-211ENST00000494800 IFFO2Q5TF58 517 aa21.49■■□□□ 1.03
HDAC4-211ENST00000494800 OTUD7BQ6GQQ9 843 aa21.49■■□□□ 1.03
HDAC4-211ENST00000494800 RFX7Q2KHR2 1363 aa21.48■■□□□ 1.03
HDAC4-211ENST00000494800 RHBDL3P58872 404 aa21.48■■□□□ 1.03
HDAC4-211ENST00000494800 CERS3Q8IU89 383 aa21.48■■□□□ 1.03
HDAC4-211ENST00000494800 TEX11Q8IYF3 940 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms