RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 VPS37DQ86XT2 251 aa10.08□□□□□ -0.8
HDAC6-234ENST00000493923 ELP3Q9H9T3 547 aa10.08□□□□□ -0.8
HDAC6-234ENST00000493923 PPP2R3BQ9Y5P8 575 aa10.08□□□□□ -0.8
HDAC6-234ENST00000493923 KIAA0100Q14667 2235 aaKnown RBP10.07□□□□□ -0.8
HDAC6-234ENST00000493923 MYO1BO43795 1136 aa10.07□□□□□ -0.8
HDAC6-234ENST00000493923 SLURP2P0DP57 97 aa10.07□□□□□ -0.8
HDAC6-234ENST00000493923 PRDX5P30044 214 aa10.07□□□□□ -0.8
HDAC6-234ENST00000493923 ATP2B3Q16720 1220 aa10.07□□□□□ -0.8
HDAC6-234ENST00000493923 CAVIN4Q5BKX8 364 aa10.07□□□□□ -0.8
HDAC6-234ENST00000493923 INTS3Q68E01 1043 aaKnown RBP10.07□□□□□ -0.8
HDAC6-234ENST00000493923 CTU1Q7Z7A3 348 aaKnown RBP10.07□□□□□ -0.8
HDAC6-234ENST00000493923 IFNL1Q8IU54 200 aa10.07□□□□□ -0.8
HDAC6-234ENST00000493923 LPIN2Q92539 896 aa10.07□□□□□ -0.8
HDAC6-234ENST00000493923 API5Q9BZZ5 524 aaKnown RBP10.07□□□□□ -0.8
HDAC6-234ENST00000493923 CENPFP49454 3210 aa10.07□□□□□ -0.8
HDAC6-234ENST00000493923 ZSWIM8A7E2V4 1837 aa10.07□□□□□ -0.8
HDAC6-234ENST00000493923 KIF16BQ96L93 1317 aa10.07□□□□□ -0.8
HDAC6-234ENST00000493923 SPDYE4A6NLX3 237 aa10.06□□□□□ -0.8
HDAC6-234ENST00000493923 PPP1R12BO60237 982 aaPredicted RBP10.06□□□□□ -0.8
HDAC6-234ENST00000493923 FRAT2O75474 233 aaPredicted RBP10.06□□□□□ -0.8
HDAC6-234ENST00000493923 IFIT1P09914 478 aaKnown RBP10.06□□□□□ -0.8
HDAC6-234ENST00000493923 CT47B1P0C2W7 299 aaPredicted RBP10.06□□□□□ -0.8
HDAC6-234ENST00000493923 SLC5A1P13866 664 aa10.06□□□□□ -0.8
HDAC6-234ENST00000493923 TRIM27P14373 513 aa10.06□□□□□ -0.8
HDAC6-234ENST00000493923 NFIAQ12857 509 aa10.06□□□□□ -0.8
HDAC6-234ENST00000493923 SUPT20HL1Q3ZLR7 823 aa10.06□□□□□ -0.8
HDAC6-234ENST00000493923 ZFPM1Q8IX07 1006 aa10.06□□□□□ -0.8
HDAC6-234ENST00000493923 TEKT1Q969V4 418 aa10.06□□□□□ -0.8
HDAC6-234ENST00000493923 CLUAP1Q96AJ1 413 aa10.06□□□□□ -0.8
HDAC6-234ENST00000493923 MS4A4AQ96JQ5 239 aa10.06□□□□□ -0.8
HDAC6-234ENST00000493923 ZDHHC15Q96MV8 337 aa10.06□□□□□ -0.8
HDAC6-234ENST00000493923 HPS5Q9UPZ3 1129 aa10.06□□□□□ -0.8
HDAC6-234ENST00000493923 DAGLAQ9Y4D2 1042 aa10.06□□□□□ -0.8
HDAC6-234ENST00000493923 MYH2Q9UKX2 1941 aa10.05□□□□□ -0.8
HDAC6-234ENST00000493923 PNMA6EA0A0J9YXQ4 647 aa10.05□□□□□ -0.8
HDAC6-234ENST00000493923 CIAO1O76071 339 aa10.05□□□□□ -0.8
HDAC6-234ENST00000493923 IREB2P48200 963 aaKnown RBP10.05□□□□□ -0.8
HDAC6-234ENST00000493923 TIMM10P62072 90 aa10.05□□□□□ -0.8
HDAC6-234ENST00000493923 HDLBPQ00341 1268 aaKnown RBP10.05□□□□□ -0.8
HDAC6-234ENST00000493923 SREBF2Q12772 1141 aa10.05□□□□□ -0.8
HDAC6-234ENST00000493923 TFCP2Q12800 502 aa10.05□□□□□ -0.8
HDAC6-234ENST00000493923 VGLL4Q14135 290 aa10.05□□□□□ -0.8
HDAC6-234ENST00000493923 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.05□□□□□ -0.8
HDAC6-234ENST00000493923 ZNF384Q8TF68 577 aa10.05□□□□□ -0.8
HDAC6-234ENST00000493923 TBC1D22AQ8WUA7 517 aa10.05□□□□□ -0.8
HDAC6-234ENST00000493923 BRI3BPQ8WY22 251 aa10.05□□□□□ -0.8
HDAC6-234ENST00000493923 OPTNQ96CV9 577 aa10.05□□□□□ -0.8
HDAC6-234ENST00000493923 CFHR5Q9BXR6 569 aa10.05□□□□□ -0.8
HDAC6-234ENST00000493923 COPRSQ9NQ92 184 aa10.05□□□□□ -0.8
HDAC6-234ENST00000493923 CEP126Q9P2H0 1117 aa10.05□□□□□ -0.8
HDAC6-234ENST00000493923 SNCAIPQ9Y6H5 919 aa10.05□□□□□ -0.8
HDAC6-234ENST00000493923 AK9Q5TCS8 1911 aa10.05□□□□□ -0.8
HDAC6-234ENST00000493923 TESPA1A2RU30 521 aaPredicted RBP10.04□□□□□ -0.8
HDAC6-234ENST00000493923 MANSC4A6NHS7 340 aaPredicted RBP10.04□□□□□ -0.8
HDAC6-234ENST00000493923 FKTNO75072 461 aa10.04□□□□□ -0.8
HDAC6-234ENST00000493923 ZBTB48P10074 688 aaPredicted RBP10.04□□□□□ -0.8
HDAC6-234ENST00000493923 MAP3K9P80192 1104 aa10.04□□□□□ -0.8
HDAC6-234ENST00000493923 CRHR2Q13324 411 aa10.04□□□□□ -0.8
HDAC6-234ENST00000493923 NFKBIBQ15653 356 aa10.04□□□□□ -0.8
HDAC6-234ENST00000493923 CDC42EP5Q6NZY7 148 aa10.04□□□□□ -0.8
HDAC6-234ENST00000493923 HHIPL2Q6UWX4 724 aa10.04□□□□□ -0.8
HDAC6-234ENST00000493923 PI16Q6UXB8 463 aa10.04□□□□□ -0.8
HDAC6-234ENST00000493923 ANKRD13AQ8IZ07 590 aa10.04□□□□□ -0.8
HDAC6-234ENST00000493923 TMEM57Q8N5G2 664 aa10.04□□□□□ -0.8
HDAC6-234ENST00000493923 ARHGAP45Q92619 1136 aa10.04□□□□□ -0.8
HDAC6-234ENST00000493923 FRAT1Q92837 279 aaPredicted RBP10.04□□□□□ -0.8
HDAC6-234ENST00000493923 ZKSCAN4Q969J2 545 aaPredicted RBP10.04□□□□□ -0.8
HDAC6-234ENST00000493923 MRIQ9BWK5 157 aa10.04□□□□□ -0.8
HDAC6-234ENST00000493923 FAM198AQ9UFP1 575 aa10.04□□□□□ -0.8
HDAC6-234ENST00000493923 MKI67P46013 3256 aaKnown RBP10.04□□□□□ -0.8
HDAC6-234ENST00000493923 SRGAP3O43295 1099 aa10.03□□□□□ -0.8
HDAC6-234ENST00000493923 RLBP1P12271 317 aa10.03□□□□□ -0.8
HDAC6-234ENST00000493923 INPP5BP32019 993 aa10.03□□□□□ -0.8
HDAC6-234ENST00000493923 IL15P40933 162 aaPredicted RBP10.03□□□□□ -0.8
HDAC6-234ENST00000493923 MLLT1Q03111 559 aaPredicted RBP10.03□□□□□ -0.8
HDAC6-234ENST00000493923 TCP10Q12799 353 aa10.03□□□□□ -0.8
HDAC6-234ENST00000493923 MTX1Q13505 466 aa10.03□□□□□ -0.8
HDAC6-234ENST00000493923 TNFAIP1Q13829 316 aa10.03□□□□□ -0.8
HDAC6-234ENST00000493923 RASGRF1Q13972 1273 aa10.03□□□□□ -0.8
HDAC6-234ENST00000493923 NOM1Q5C9Z4 860 aaKnown RBP10.03□□□□□ -0.8
HDAC6-234ENST00000493923 CCDC102BQ68D86 513 aa10.03□□□□□ -0.8
HDAC6-234ENST00000493923 ATF7IPQ6VMQ6 1270 aa10.03□□□□□ -0.8
HDAC6-234ENST00000493923 MIGA2Q7L4E1 593 aa10.03□□□□□ -0.8
HDAC6-234ENST00000493923 WDR66Q8TBY9 1149 aa10.03□□□□□ -0.8
HDAC6-234ENST00000493923 CD99L2Q8TCZ2 262 aa10.03□□□□□ -0.8
HDAC6-234ENST00000493923 BACH2Q9BYV9 841 aa10.03□□□□□ -0.8
HDAC6-234ENST00000493923 FARP1Q9Y4F1 1045 aaPredicted RBP10.03□□□□□ -0.8
HDAC6-234ENST00000493923 MYO5AQ9Y4I1 1855 aaKnown RBP10.03□□□□□ -0.8
HDAC6-234ENST00000493923 BRCA2P51587 3418 aa10.03□□□□□ -0.8
HDAC6-234ENST00000493923 TPM2P07951 284 aa10.02□□□□□ -0.81
HDAC6-234ENST00000493923 SH3BP5LQ7L8J4 393 aa10.02□□□□□ -0.81
HDAC6-234ENST00000493923 OTUD5Q96G74 571 aa10.02□□□□□ -0.81
HDAC6-234ENST00000493923 XAGE2Q96GT9 111 aa10.02□□□□□ -0.81
HDAC6-234ENST00000493923 WRNIP1Q96S55 665 aa10.02□□□□□ -0.81
HDAC6-234ENST00000493923 C1orf115Q9H7X2 142 aa10.02□□□□□ -0.81
HDAC6-234ENST00000493923 DDX4Q9NQI0 724 aaKnown RBP10.02□□□□□ -0.81
HDAC6-234ENST00000493923 FBXO3Q9UK99 471 aa10.02□□□□□ -0.81
HDAC6-234ENST00000493923 SUGT1Q9Y2Z0 365 aa10.02□□□□□ -0.81
HDAC6-234ENST00000493923 RFX7Q2KHR2 1363 aa10.01□□□□□ -0.81
HDAC6-234ENST00000493923 ATRNL1Q5VV63 1379 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms