RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 ERICH6Q7L0X2 663 aa27.78■■■□□ 2.04
SNIP1-203ENST00000493916 FAM163AQ96GL9 167 aaPredicted RBP27.78■■■□□ 2.04
SNIP1-203ENST00000493916 KIF23Q02241 960 aaPredicted RBP27.77■■■□□ 2.04
SNIP1-203ENST00000493916 CDC42EP5Q6NZY7 148 aa27.77■■■□□ 2.04
SNIP1-203ENST00000493916 CDAN1Q8IWY9 1227 aa27.77■■■□□ 2.04
SNIP1-203ENST00000493916 TLR7Q9NYK1 1049 aaKnown RBP27.77■■■□□ 2.04
SNIP1-203ENST00000493916 FZD1Q9UP38 647 aa27.77■■■□□ 2.04
SNIP1-203ENST00000493916 HSPA8P11142 646 aaKnown RBP27.76■■■□□ 2.03
SNIP1-203ENST00000493916 RRP1P56182 461 aaKnown RBP27.76■■■□□ 2.03
SNIP1-203ENST00000493916 REM2Q8IYK8 340 aaPredicted RBP27.76■■■□□ 2.03
SNIP1-203ENST00000493916 RHPN1Q8TCX5 695 aa27.76■■■□□ 2.03
SNIP1-203ENST00000493916 CCDC8Q9H0W5 538 aaPredicted RBP27.76■■■□□ 2.03
SNIP1-203ENST00000493916 MYH2Q9UKX2 1941 aa27.76■■■□□ 2.03
SNIP1-203ENST00000493916 IREB2P48200 963 aaKnown RBP27.75■■■□□ 2.03
SNIP1-203ENST00000493916 MECOMQ03112 1051 aa27.75■■■□□ 2.03
SNIP1-203ENST00000493916 KIF1BPQ96EK5 621 aa27.75■■■□□ 2.03
SNIP1-203ENST00000493916 PRDM10Q9NQV6 1147 aa27.75■■■□□ 2.03
SNIP1-203ENST00000493916 MROH7-TTC4A0A0A0MT08 1334 aa27.74■■■□□ 2.03
SNIP1-203ENST00000493916 USP2O75604 605 aaPredicted RBP27.74■■■□□ 2.03
SNIP1-203ENST00000493916 COL13A1Q5TAT6 717 aaPredicted RBP27.74■■■□□ 2.03
SNIP1-203ENST00000493916 TBC1D9Q6ZT07 1266 aa27.74■■■□□ 2.03
SNIP1-203ENST00000493916 USP40Q9NVE5 1235 aa27.74■■■□□ 2.03
SNIP1-203ENST00000493916 AKAP11Q9UKA4 1901 aa27.74■■■□□ 2.03
SNIP1-203ENST00000493916 MAST2Q6P0Q8 1798 aa27.73■■■□□ 2.03
SNIP1-203ENST00000493916 RAB11FIP3O75154 756 aa27.73■■■□□ 2.03
SNIP1-203ENST00000493916 GSTO1P78417 241 aa27.73■■■□□ 2.03
SNIP1-203ENST00000493916 AACSQ86V21 672 aa27.73■■■□□ 2.03
SNIP1-203ENST00000493916 ZNF384Q8TF68 577 aa27.73■■■□□ 2.03
SNIP1-203ENST00000493916 RFX7Q2KHR2 1363 aa27.73■■■□□ 2.03
SNIP1-203ENST00000493916 OTOFQ9HC10 1997 aa27.72■■■□□ 2.03
SNIP1-203ENST00000493916 LBX1P52954 281 aa27.72■■■□□ 2.03
SNIP1-203ENST00000493916 FAM151AQ8WW52 585 aa27.72■■■□□ 2.03
SNIP1-203ENST00000493916 NSUN4Q96CB9 384 aaKnown RBP27.72■■■□□ 2.03
SNIP1-203ENST00000493916 HOOK2Q96ED9 719 aa27.72■■■□□ 2.03
SNIP1-203ENST00000493916 CSRNP1Q96S65 589 aa27.72■■■□□ 2.03
SNIP1-203ENST00000493916 IGSF3O75054 1194 aa27.71■■■□□ 2.03
SNIP1-203ENST00000493916 NFIAQ12857 509 aa27.71■■■□□ 2.03
SNIP1-203ENST00000493916 ANKRD13AQ8IZ07 590 aa27.71■■■□□ 2.03
SNIP1-203ENST00000493916 IL1RAPL2Q9NP60 686 aa27.71■■■□□ 2.03
SNIP1-203ENST00000493916 SNRKQ9NRH2 765 aa27.71■■■□□ 2.03
SNIP1-203ENST00000493916 SAGE1Q9NXZ1 904 aa27.71■■■□□ 2.03
SNIP1-203ENST00000493916 RAI14Q9P0K7 980 aa27.71■■■□□ 2.03
SNIP1-203ENST00000493916 GPR75-ASB3A0A0A6YYF3 556 aa27.7■■■□□ 2.02
SNIP1-203ENST00000493916 BTDP43251 543 aa27.7■■■□□ 2.02
SNIP1-203ENST00000493916 CLASRPQ8N2M8 674 aaKnown RBP27.7■■■□□ 2.02
SNIP1-203ENST00000493916 SLC10A4Q96EP9 437 aa27.7■■■□□ 2.02
SNIP1-203ENST00000493916 CLMNQ96JQ2 1002 aa27.7■■■□□ 2.02
SNIP1-203ENST00000493916 IDI2Q9BXS1 227 aa27.7■■■□□ 2.02
SNIP1-203ENST00000493916 LRP2BPQ9P2M1 347 aa27.7■■■□□ 2.02
SNIP1-203ENST00000493916 FAM198AQ9UFP1 575 aa27.7■■■□□ 2.02
SNIP1-203ENST00000493916 CYP2E1P05181 493 aaPredicted RBP27.69■■■□□ 2.02
SNIP1-203ENST00000493916 LDHCP07864 332 aa27.69■■■□□ 2.02
SNIP1-203ENST00000493916 SPRYD7Q5W111 196 aa27.69■■■□□ 2.02
SNIP1-203ENST00000493916 LAMB1P07942 1786 aa27.68■■■□□ 2.02
SNIP1-203ENST00000493916 APBB1O00213 710 aa27.68■■■□□ 2.02
SNIP1-203ENST00000493916 ZAP70P43403 619 aa27.68■■■□□ 2.02
SNIP1-203ENST00000493916 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.68■■■□□ 2.02
SNIP1-203ENST00000493916 MAP4K4O95819 1239 aaPredicted RBP27.67■■■□□ 2.02
SNIP1-203ENST00000493916 ZBTB48P10074 688 aaPredicted RBP27.67■■■□□ 2.02
SNIP1-203ENST00000493916 TCP10Q12799 353 aa27.67■■■□□ 2.02
SNIP1-203ENST00000493916 WNK4Q96J92 1243 aa27.67■■■□□ 2.02
SNIP1-203ENST00000493916 ENTPD3O75355 529 aa27.66■■■□□ 2.02
SNIP1-203ENST00000493916 DCAF15Q66K64 600 aa27.66■■■□□ 2.02
SNIP1-203ENST00000493916 TSKSQ9UJT2 592 aa27.66■■■□□ 2.02
SNIP1-203ENST00000493916 WDHD1O75717 1129 aaPredicted RBP27.65■■■□□ 2.02
SNIP1-203ENST00000493916 TM4SF4P48230 202 aa27.65■■■□□ 2.02
SNIP1-203ENST00000493916 RGS3P49796 1198 aa27.65■■■□□ 2.02
SNIP1-203ENST00000493916 RHBDL3P58872 404 aa27.65■■■□□ 2.02
SNIP1-203ENST00000493916 MAP3K9P80192 1104 aa27.65■■■□□ 2.02
SNIP1-203ENST00000493916 MKRN3Q13064 507 aaKnown RBP27.65■■■□□ 2.02
SNIP1-203ENST00000493916 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.65■■■□□ 2.02
SNIP1-203ENST00000493916 PIH1D3Q9NQM4 214 aaKnown RBP27.65■■■□□ 2.02
SNIP1-203ENST00000493916 RNF186Q9NXI6 227 aa27.65■■■□□ 2.02
SNIP1-203ENST00000493916 IFIT2P09913 472 aaKnown RBP27.64■■■□□ 2.02
SNIP1-203ENST00000493916 SREBF2Q12772 1141 aa27.64■■■□□ 2.02
SNIP1-203ENST00000493916 NAA16Q6N069 864 aaPredicted RBP27.64■■■□□ 2.02
SNIP1-203ENST00000493916 NPM3O75607 178 aaKnown RBP27.63■■■□□ 2.01
SNIP1-203ENST00000493916 VGLL4Q14135 290 aa27.63■■■□□ 2.01
SNIP1-203ENST00000493916 ZFPM1Q8IX07 1006 aa27.63■■■□□ 2.01
SNIP1-203ENST00000493916 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.62■■■□□ 2.01
SNIP1-203ENST00000493916 ZNF341Q9BYN7 854 aa27.62■■■□□ 2.01
SNIP1-203ENST00000493916 ELP3Q9H9T3 547 aa27.62■■■□□ 2.01
SNIP1-203ENST00000493916 DDX4Q9NQI0 724 aaKnown RBP27.62■■■□□ 2.01
SNIP1-203ENST00000493916 CSADQ9Y600 493 aa27.62■■■□□ 2.01
SNIP1-203ENST00000493916 DOCK2Q92608 1830 aa27.62■■■□□ 2.01
SNIP1-203ENST00000493916 ATRNL1Q5VV63 1379 aa27.61■■■□□ 2.01
SNIP1-203ENST00000493916 MANSC4A6NHS7 340 aaPredicted RBP27.61■■■□□ 2.01
SNIP1-203ENST00000493916 GJA5P36382 358 aa27.61■■■□□ 2.01
SNIP1-203ENST00000493916 WRNIP1Q96S55 665 aa27.61■■■□□ 2.01
SNIP1-203ENST00000493916 LRRCC1Q9C099 1032 aa27.61■■■□□ 2.01
SNIP1-203ENST00000493916 COL2A1P02458 1487 aaPredicted RBP27.6■■■□□ 2.01
SNIP1-203ENST00000493916 TRPA1O75762 1119 aa27.6■■■□□ 2.01
SNIP1-203ENST00000493916 TMED8Q6PL24 325 aaPredicted RBP27.6■■■□□ 2.01
SNIP1-203ENST00000493916 TNS4Q8IZW8 715 aa27.6■■■□□ 2.01
SNIP1-203ENST00000493916 OPTNQ96CV9 577 aa27.6■■■□□ 2.01
SNIP1-203ENST00000493916 NOL10Q9BSC4 688 aaKnown RBP27.6■■■□□ 2.01
SNIP1-203ENST00000493916 DCTPP1Q9H773 170 aa27.6■■■□□ 2.01
SNIP1-203ENST00000493916 INHBEP58166 350 aa27.59■■■□□ 2.01
SNIP1-203ENST00000493916 MIGA2Q7L4E1 593 aa27.59■■■□□ 2.01
SNIP1-203ENST00000493916 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.59■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms