RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 RBBP6Q7Z6E9 1792 aaKnown RBP21.71■■□□□ 1.07
COL9A1-210ENST00000493682 TLR2O60603 784 aa21.7■■□□□ 1.06
COL9A1-210ENST00000493682 WDHD1O75717 1129 aaPredicted RBP21.7■■□□□ 1.06
COL9A1-210ENST00000493682 EN2P19622 333 aaPredicted RBP21.7■■□□□ 1.06
COL9A1-210ENST00000493682 PPIL2Q13356 520 aa21.7■■□□□ 1.06
COL9A1-210ENST00000493682 MIGA2Q7L4E1 593 aa21.7■■□□□ 1.06
COL9A1-210ENST00000493682 FAM151AQ8WW52 585 aa21.7■■□□□ 1.06
COL9A1-210ENST00000493682 ZNF341Q9BYN7 854 aa21.7■■□□□ 1.06
COL9A1-210ENST00000493682 SIL1Q9H173 461 aa21.7■■□□□ 1.06
COL9A1-210ENST00000493682 ZCCHC17Q9NP64 241 aaKnown RBP21.7■■□□□ 1.06
COL9A1-210ENST00000493682 DAGLAQ9Y4D2 1042 aa21.7■■□□□ 1.06
COL9A1-210ENST00000493682 PTCH2Q9Y6C5 1203 aa21.7■■□□□ 1.06
COL9A1-210ENST00000493682 CIAO1O76071 339 aa21.69■■□□□ 1.06
COL9A1-210ENST00000493682 UBTFL1P0CB47 393 aaPredicted RBP21.69■■□□□ 1.06
COL9A1-210ENST00000493682 DIXDC1Q155Q3 683 aa21.69■■□□□ 1.06
COL9A1-210ENST00000493682 ZNF333Q96JL9 665 aa21.69■■□□□ 1.06
COL9A1-210ENST00000493682 RNF216Q9NWF9 866 aaPredicted RBP21.69■■□□□ 1.06
COL9A1-210ENST00000493682 PRDX5P30044 214 aa21.68■■□□□ 1.06
COL9A1-210ENST00000493682 INPP5BP32019 993 aa21.68■■□□□ 1.06
COL9A1-210ENST00000493682 ATP2B3Q16720 1220 aa21.68■■□□□ 1.06
COL9A1-210ENST00000493682 SLC9C1Q4G0N8 1177 aa21.68■■□□□ 1.06
COL9A1-210ENST00000493682 CDC42EP5Q6NZY7 148 aa21.68■■□□□ 1.06
COL9A1-210ENST00000493682 CEP126Q9P2H0 1117 aa21.68■■□□□ 1.06
COL9A1-210ENST00000493682 FBXO3Q9UK99 471 aa21.68■■□□□ 1.06
COL9A1-210ENST00000493682 MKI67P46013 3256 aaKnown RBP21.67■■□□□ 1.06
COL9A1-210ENST00000493682 MYH13Q9UKX3 1938 aa21.67■■□□□ 1.06
COL9A1-210ENST00000493682 PPATQ06203 517 aa21.67■■□□□ 1.06
COL9A1-210ENST00000493682 TCP10Q12799 353 aa21.67■■□□□ 1.06
COL9A1-210ENST00000493682 TRMT2AQ8IZ69 625 aaKnown RBP21.67■■□□□ 1.06
COL9A1-210ENST00000493682 ARHGAP39Q9C0H5 1083 aa21.67■■□□□ 1.06
COL9A1-210ENST00000493682 GNL3LQ9NVN8 582 aaKnown RBP21.67■■□□□ 1.06
COL9A1-210ENST00000493682 LDHBP07195 334 aaKnown RBP21.66■■□□□ 1.06
COL9A1-210ENST00000493682 LACTBP83111 547 aaPredicted RBP21.66■■□□□ 1.06
COL9A1-210ENST00000493682 NFIAQ12857 509 aa21.66■■□□□ 1.06
COL9A1-210ENST00000493682 NBPF11Q86T75 865 aa21.66■■□□□ 1.06
COL9A1-210ENST00000493682 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.66■■□□□ 1.06
COL9A1-210ENST00000493682 TMEM106CQ9BVX2 250 aa21.66■■□□□ 1.06
COL9A1-210ENST00000493682 ZNF112Q9UJU3 913 aa21.66■■□□□ 1.06
COL9A1-210ENST00000493682 NOB1Q9ULX3 412 aaKnown RBP21.66■■□□□ 1.06
COL9A1-210ENST00000493682 KIF22Q14807 665 aa21.65■■□□□ 1.06
COL9A1-210ENST00000493682 GCC1Q96CN9 775 aa21.65■■□□□ 1.06
COL9A1-210ENST00000493682 USP40Q9NVE5 1235 aa21.65■■□□□ 1.06
COL9A1-210ENST00000493682 FAM198AQ9UFP1 575 aa21.65■■□□□ 1.06
COL9A1-210ENST00000493682 SALL1Q9NSC2 1324 aa21.64■■□□□ 1.05
COL9A1-210ENST00000493682 PHKA1P46020 1223 aa21.64■■□□□ 1.05
COL9A1-210ENST00000493682 DENND2AQ9ULE3 1009 aa21.64■■□□□ 1.05
COL9A1-210ENST00000493682 LRRFIP2Q9Y608 721 aaKnown RBP21.64■■□□□ 1.05
COL9A1-210ENST00000493682 KIAA0100Q14667 2235 aaKnown RBP21.64■■□□□ 1.05
COL9A1-210ENST00000493682 SEMA3EO15041 775 aa21.63■■□□□ 1.05
COL9A1-210ENST00000493682 IL15P40933 162 aaPredicted RBP21.63■■□□□ 1.05
COL9A1-210ENST00000493682 C17orf99Q6UX52 265 aa21.63■■□□□ 1.05
COL9A1-210ENST00000493682 ANKRD23Q86SG2 305 aa21.63■■□□□ 1.05
COL9A1-210ENST00000493682 KCNH4Q9UQ05 1017 aa21.63■■□□□ 1.05
COL9A1-210ENST00000493682 PA2G4Q9UQ80 394 aaKnown RBP21.63■■□□□ 1.05
COL9A1-210ENST00000493682 ZSWIM8A7E2V4 1837 aa21.63■■□□□ 1.05
COL9A1-210ENST00000493682 BRCA2P51587 3418 aa21.62■■□□□ 1.05
COL9A1-210ENST00000493682 CT47B1P0C2W7 299 aaPredicted RBP21.62■■□□□ 1.05
COL9A1-210ENST00000493682 NOL9Q5SY16 702 aaKnown RBP21.62■■□□□ 1.05
COL9A1-210ENST00000493682 ZFPM1Q8IX07 1006 aa21.62■■□□□ 1.05
COL9A1-210ENST00000493682 SH3TC2Q8TF17 1288 aa21.62■■□□□ 1.05
COL9A1-210ENST00000493682 API5Q9BZZ5 524 aaKnown RBP21.62■■□□□ 1.05
COL9A1-210ENST00000493682 HDAC5Q9UQL6 1122 aa21.62■■□□□ 1.05
COL9A1-210ENST00000493682 PDHXO00330 501 aa21.61■■□□□ 1.05
COL9A1-210ENST00000493682 MYCP01106 439 aaPredicted RBP21.61■■□□□ 1.05
COL9A1-210ENST00000493682 GNRH1P01148 92 aa21.61■■□□□ 1.05
COL9A1-210ENST00000493682 ADORA1P30542 326 aa21.61■■□□□ 1.05
COL9A1-210ENST00000493682 SLC4A8Q2Y0W8 1093 aa21.61■■□□□ 1.05
COL9A1-210ENST00000493682 COPRSQ9NQ92 184 aa21.61■■□□□ 1.05
COL9A1-210ENST00000493682 CPA4Q9UI42 421 aa21.61■■□□□ 1.05
COL9A1-210ENST00000493682 ZBTB22O15209 634 aa21.6■■□□□ 1.05
COL9A1-210ENST00000493682 MOGSQ13724 837 aa21.6■■□□□ 1.05
COL9A1-210ENST00000493682 CCDC102BQ68D86 513 aa21.6■■□□□ 1.05
COL9A1-210ENST00000493682 MEIS3Q99687 375 aa21.6■■□□□ 1.05
COL9A1-210ENST00000493682 ADGRA2Q96PE1 1338 aa21.59■■□□□ 1.05
COL9A1-210ENST00000493682 ECM2O94769 699 aaPredicted RBP21.59■■□□□ 1.05
COL9A1-210ENST00000493682 CTGFP29279 349 aa21.59■■□□□ 1.05
COL9A1-210ENST00000493682 PRMT2P55345 433 aa21.59■■□□□ 1.05
COL9A1-210ENST00000493682 ZGPATQ8N5A5 531 aaKnown RBP21.59■■□□□ 1.05
COL9A1-210ENST00000493682 ATRNL1Q5VV63 1379 aa21.59■■□□□ 1.05
COL9A1-210ENST00000493682 AK9Q5TCS8 1911 aa21.59■■□□□ 1.05
COL9A1-210ENST00000493682 GAKO14976 1311 aa21.58■■□□□ 1.05
COL9A1-210ENST00000493682 HOXD11P31277 338 aaPredicted RBP21.58■■□□□ 1.05
COL9A1-210ENST00000493682 PSMC4P43686 418 aa21.58■■□□□ 1.05
COL9A1-210ENST00000493682 RGS3P49796 1198 aa21.58■■□□□ 1.05
COL9A1-210ENST00000493682 RASGRF1Q13972 1273 aa21.58■■□□□ 1.05
COL9A1-210ENST00000493682 HABP4Q5JVS0 413 aaKnown RBP21.58■■□□□ 1.05
COL9A1-210ENST00000493682 TRIM47Q96LD4 638 aa21.58■■□□□ 1.05
COL9A1-210ENST00000493682 IDI2Q9BXS1 227 aa21.58■■□□□ 1.05
COL9A1-210ENST00000493682 PHF20L1A8MW92 1017 aa21.57■■□□□ 1.04
COL9A1-210ENST00000493682 ENTPD3O75355 529 aa21.57■■□□□ 1.04
COL9A1-210ENST00000493682 TIMM10P62072 90 aa21.57■■□□□ 1.04
COL9A1-210ENST00000493682 CXCL11O14625 94 aa21.56■■□□□ 1.04
COL9A1-210ENST00000493682 SH3BP5LQ7L8J4 393 aa21.56■■□□□ 1.04
COL9A1-210ENST00000493682 DZIP1Q86YF9 867 aaKnown RBP21.56■■□□□ 1.04
COL9A1-210ENST00000493682 ABCF2Q9UG63 623 aa21.56■■□□□ 1.04
COL9A1-210ENST00000493682 SRRDQ9UH36 339 aa21.56■■□□□ 1.04
COL9A1-210ENST00000493682 RFX7Q2KHR2 1363 aa21.56■■□□□ 1.04
COL9A1-210ENST00000493682 PDS5AQ29RF7 1337 aaKnown RBP21.55■■□□□ 1.04
COL9A1-210ENST00000493682 FMNL1O95466 1100 aaPredicted RBP21.55■■□□□ 1.04
COL9A1-210ENST00000493682 OSBPP22059 807 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms