RNA–Protein interactions for RNA: ENST00000492512.1

GPNMB-213, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-213ENST00000492512 CCDC184Q52MB2 194 aa17.29■□□□□ 0.36
GPNMB-213ENST00000492512 METTL24Q5JXM2 366 aa17.29■□□□□ 0.36
GPNMB-213ENST00000492512 MIGA2Q7L4E1 593 aa17.29■□□□□ 0.36
GPNMB-213ENST00000492512 ANKRD23Q86SG2 305 aa17.29■□□□□ 0.36
GPNMB-213ENST00000492512 SUCLG2Q96I99 432 aa17.29■□□□□ 0.36
GPNMB-213ENST00000492512 HTATIP2Q9BUP3 242 aa17.29■□□□□ 0.36
GPNMB-213ENST00000492512 MRIQ9BWK5 157 aa17.29■□□□□ 0.36
GPNMB-213ENST00000492512 SRCIN1Q9C0H9 1055 aa17.29■□□□□ 0.36
GPNMB-213ENST00000492512 BIN2Q9UBW5 565 aaPredicted RBP17.29■□□□□ 0.36
GPNMB-213ENST00000492512 RPAP1Q9BWH6 1393 aaPredicted RBP17.28■□□□□ 0.36
GPNMB-213ENST00000492512 PDHXO00330 501 aa17.28■□□□□ 0.36
GPNMB-213ENST00000492512 APOBEC3HQ6NTF7 200 aaKnown RBP17.28■□□□□ 0.36
GPNMB-213ENST00000492512 WDR63Q8IWG1 891 aa17.28■□□□□ 0.36
GPNMB-213ENST00000492512 SALL2Q9Y467 1007 aaPredicted RBP17.28■□□□□ 0.36
GPNMB-213ENST00000492512 MYH13Q9UKX3 1938 aa17.27■□□□□ 0.36
GPNMB-213ENST00000492512 MYPNQ86TC9 1320 aa17.27■□□□□ 0.36
GPNMB-213ENST00000492512 GJB1P08034 283 aa17.27■□□□□ 0.36
GPNMB-213ENST00000492512 CCL5P13501 91 aa17.27■□□□□ 0.36
GPNMB-213ENST00000492512 INPP5BP32019 993 aa17.27■□□□□ 0.36
GPNMB-213ENST00000492512 GJA8P48165 433 aa17.27■□□□□ 0.36
GPNMB-213ENST00000492512 KAZALD1Q96I82 304 aa17.27■□□□□ 0.36
GPNMB-213ENST00000492512 RNF208Q9H0X6 261 aa17.27■□□□□ 0.36
GPNMB-213ENST00000492512 SUGT1Q9Y2Z0 365 aa17.27■□□□□ 0.36
GPNMB-213ENST00000492512 MGAMO43451 1857 aa17.27■□□□□ 0.35
GPNMB-213ENST00000492512 PDE8BO95263 885 aa17.26■□□□□ 0.35
GPNMB-213ENST00000492512 BCAMP50895 628 aa17.26■□□□□ 0.35
GPNMB-213ENST00000492512 UBXN2AP68543 259 aa17.26■□□□□ 0.35
GPNMB-213ENST00000492512 LRRC24Q50LG9 513 aa17.26■□□□□ 0.35
GPNMB-213ENST00000492512 HHIPL2Q6UWX4 724 aa17.26■□□□□ 0.35
GPNMB-213ENST00000492512 NR2E3Q9Y5X4 410 aa17.26■□□□□ 0.35
GPNMB-213ENST00000492512 ADGRA2Q96PE1 1338 aa17.25■□□□□ 0.35
GPNMB-213ENST00000492512 NBPF7P0C2Y1 421 aaPredicted RBP17.25■□□□□ 0.35
GPNMB-213ENST00000492512 UBE2Q1Q7Z7E8 422 aa17.25■□□□□ 0.35
GPNMB-213ENST00000492512 FAM151AQ8WW52 585 aa17.25■□□□□ 0.35
GPNMB-213ENST00000492512 BICC1Q9H694 974 aaKnown RBP17.25■□□□□ 0.35
GPNMB-213ENST00000492512 KCNH4Q9UQ05 1017 aa17.25■□□□□ 0.35
GPNMB-213ENST00000492512 TCP10Q12799 353 aa17.24■□□□□ 0.35
GPNMB-213ENST00000492512 VGLL2Q8N8G2 317 aa17.24■□□□□ 0.35
GPNMB-213ENST00000492512 PARK7Q99497 189 aaKnown RBP17.24■□□□□ 0.35
GPNMB-213ENST00000492512 IFIT1P09914 478 aaKnown RBP17.23■□□□□ 0.35
GPNMB-213ENST00000492512 FCGRTP55899 365 aa17.23■□□□□ 0.35
GPNMB-213ENST00000492512 PRKCZQ05513 592 aa17.23■□□□□ 0.35
GPNMB-213ENST00000492512 RABL6Q3YEC7 729 aaPredicted RBP17.23■□□□□ 0.35
GPNMB-213ENST00000492512 U2AF1L4Q8WU68 220 aaKnown RBP17.23■□□□□ 0.35
GPNMB-213ENST00000492512 ZNF112Q9UJU3 913 aa17.23■□□□□ 0.35
GPNMB-213ENST00000492512 UTYO14607 1347 aa17.22■□□□□ 0.35
GPNMB-213ENST00000492512 FARP2O94887 1054 aaPredicted RBP17.22■□□□□ 0.35
GPNMB-213ENST00000492512 ZEB1P37275 1124 aaPredicted RBP17.22■□□□□ 0.35
GPNMB-213ENST00000492512 MOGSQ13724 837 aa17.22■□□□□ 0.35
GPNMB-213ENST00000492512 SLAIN1Q8ND83 568 aa17.22■□□□□ 0.35
GPNMB-213ENST00000492512 WDR66Q8TBY9 1149 aa17.22■□□□□ 0.35
GPNMB-213ENST00000492512 PRO3102Q9H379 93 aa17.22■□□□□ 0.35
GPNMB-213ENST00000492512 KIF16BQ96L93 1317 aa17.21■□□□□ 0.35
GPNMB-213ENST00000492512 CYP2C8P10632 490 aa17.21■□□□□ 0.35
GPNMB-213ENST00000492512 BCRP11274 1271 aa17.21■□□□□ 0.35
GPNMB-213ENST00000492512 PUM3Q15397 648 aaKnown RBP17.21■□□□□ 0.35
GPNMB-213ENST00000492512 NOL9Q5SY16 702 aaKnown RBP17.21■□□□□ 0.35
GPNMB-213ENST00000492512 SLC17A8Q8NDX2 589 aa17.21■□□□□ 0.35
GPNMB-213ENST00000492512 KLHDC4Q8TBB5 520 aa17.21■□□□□ 0.35
GPNMB-213ENST00000492512 UNC93B1Q9H1C4 597 aa17.21■□□□□ 0.35
GPNMB-213ENST00000492512 SPINK5Q9NQ38 1064 aaPredicted RBP17.21■□□□□ 0.35
GPNMB-213ENST00000492512 A0A0C4DFX4 3053 aa17.21■□□□□ 0.35
GPNMB-213ENST00000492512 COL6A3P12111 3177 aa17.2■□□□□ 0.34
GPNMB-213ENST00000492512 CXCL11O14625 94 aa17.2■□□□□ 0.34
GPNMB-213ENST00000492512 ZBTB7BO15156 539 aaPredicted RBP17.2■□□□□ 0.34
GPNMB-213ENST00000492512 GPAT2Q6NUI2 795 aa17.2■□□□□ 0.34
GPNMB-213ENST00000492512 CDC42EP5Q6NZY7 148 aa17.2■□□□□ 0.34
GPNMB-213ENST00000492512 ANKRD44Q8N8A2 993 aa17.2■□□□□ 0.34
GPNMB-213ENST00000492512 GABRQQ9UN88 632 aa17.2■□□□□ 0.34
GPNMB-213ENST00000492512 DAGLAQ9Y4D2 1042 aa17.2■□□□□ 0.34
GPNMB-213ENST00000492512 LAMA3Q16787 3333 aa17.19■□□□□ 0.34
GPNMB-213ENST00000492512 DLL1O00548 723 aa17.19■□□□□ 0.34
GPNMB-213ENST00000492512 ADCY3O60266 1144 aa17.19■□□□□ 0.34
GPNMB-213ENST00000492512 EVI5O60447 810 aa17.19■□□□□ 0.34
GPNMB-213ENST00000492512 SGPL1O95470 568 aa17.19■□□□□ 0.34
GPNMB-213ENST00000492512 FGFR2P21802 821 aa17.19■□□□□ 0.34
GPNMB-213ENST00000492512 NFIAQ12857 509 aa17.19■□□□□ 0.34
GPNMB-213ENST00000492512 DIXDC1Q155Q3 683 aa17.19■□□□□ 0.34
GPNMB-213ENST00000492512 MRS2Q9HD23 443 aa17.19■□□□□ 0.34
GPNMB-213ENST00000492512 A0A1W2PPC1 479 aa17.18■□□□□ 0.34
GPNMB-213ENST00000492512 SLC5A1P13866 664 aa17.18■□□□□ 0.34
GPNMB-213ENST00000492512 FASTKD5Q7L8L6 764 aaKnown RBP17.18■□□□□ 0.34
GPNMB-213ENST00000492512 USP40Q9NVE5 1235 aa17.18■□□□□ 0.34
GPNMB-213ENST00000492512 DOCK2Q92608 1830 aa17.18■□□□□ 0.34
GPNMB-213ENST00000492512 DOCK3Q8IZD9 2030 aa17.18■□□□□ 0.34
GPNMB-213ENST00000492512 CUL9Q8IWT3 2517 aa17.17■□□□□ 0.34
GPNMB-213ENST00000492512 TFRCP02786 760 aaKnown RBP17.17■□□□□ 0.34
GPNMB-213ENST00000492512 ELNP15502 786 aa17.17■□□□□ 0.34
GPNMB-213ENST00000492512 FLT3LGP49771 235 aa17.17■□□□□ 0.34
GPNMB-213ENST00000492512 GADL1Q6ZQY3 521 aa17.17■□□□□ 0.34
GPNMB-213ENST00000492512 LPIN2Q92539 896 aa17.17■□□□□ 0.34
GPNMB-213ENST00000492512 PICK1Q9NRD5 415 aa17.17■□□□□ 0.34
GPNMB-213ENST00000492512 FAM198AQ9UFP1 575 aa17.17■□□□□ 0.34
GPNMB-213ENST00000492512 ZHX2Q9Y6X8 837 aa17.17■□□□□ 0.34
GPNMB-213ENST00000492512 PTPRFP10586 1907 aa17.16■□□□□ 0.34
GPNMB-213ENST00000492512 A0A0G2JLL6 359 aaPredicted RBP17.16■□□□□ 0.34
GPNMB-213ENST00000492512 TNPO2O14787 897 aaKnown RBP17.16■□□□□ 0.34
GPNMB-213ENST00000492512 INHAP05111 366 aa17.16■□□□□ 0.34
GPNMB-213ENST00000492512 LDHBP07195 334 aaKnown RBP17.16■□□□□ 0.34
GPNMB-213ENST00000492512 CAPN2P17655 700 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms