RNA–Protein interactions for RNA: ENST00000491802.1

CPNE9-204, Transcript of copine family member 9, humanhuman

TSL 4

Gene CPNE9, Length 584 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-204ENST00000491802 RGMBQ6NW40 437 aa28.37■■■□□ 2.13
CPNE9-204ENST00000491802 NSUN4Q96CB9 384 aaKnown RBP28.37■■■□□ 2.13
CPNE9-204ENST00000491802 PIH1D3Q9NQM4 214 aaKnown RBP28.37■■■□□ 2.13
CPNE9-204ENST00000491802 SSC5DA1L4H1 1573 aa28.37■■■□□ 2.13
CPNE9-204ENST00000491802 TNNI2P48788 182 aa28.36■■■□□ 2.13
CPNE9-204ENST00000491802 GSTO1P78417 241 aa28.36■■■□□ 2.13
CPNE9-204ENST00000491802 SUPT20HL1Q3ZLR7 823 aa28.36■■■□□ 2.13
CPNE9-204ENST00000491802 CDC42EP5Q6NZY7 148 aa28.36■■■□□ 2.13
CPNE9-204ENST00000491802 MAP3K11Q16584 847 aa28.35■■■□□ 2.13
CPNE9-204ENST00000491802 PAXIP1Q6ZW49 1069 aaPredicted RBP28.35■■■□□ 2.13
CPNE9-204ENST00000491802 FAM83AQ86UY5 434 aa28.35■■■□□ 2.13
CPNE9-204ENST00000491802 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.35■■■□□ 2.13
CPNE9-204ENST00000491802 CCDC102AQ96A19 550 aa28.35■■■□□ 2.13
CPNE9-204ENST00000491802 UNCXA6NJT0 531 aa28.34■■■□□ 2.13
CPNE9-204ENST00000491802 BTDP43251 543 aa28.34■■■□□ 2.13
CPNE9-204ENST00000491802 RPAP1Q9BWH6 1393 aaPredicted RBP28.34■■■□□ 2.13
CPNE9-204ENST00000491802 FAM155AB1AL88 458 aaPredicted RBP28.33■■■□□ 2.13
CPNE9-204ENST00000491802 NOGQ13253 232 aa28.33■■■□□ 2.13
CPNE9-204ENST00000491802 TEPSINQ96N21 525 aa28.33■■■□□ 2.13
CPNE9-204ENST00000491802 DNAJC2Q99543 621 aaKnown RBP28.33■■■□□ 2.13
CPNE9-204ENST00000491802 ANTXR1Q9H6X2 564 aa28.33■■■□□ 2.13
CPNE9-204ENST00000491802 USP40Q9NVE5 1235 aa28.33■■■□□ 2.13
CPNE9-204ENST00000491802 IDH1O75874 414 aaKnown RBP28.32■■■□□ 2.12
CPNE9-204ENST00000491802 LDHCP07864 332 aa28.32■■■□□ 2.12
CPNE9-204ENST00000491802 MAP2K1Q02750 393 aaPredicted RBP28.32■■■□□ 2.12
CPNE9-204ENST00000491802 TTLL12Q14166 644 aaPredicted RBP28.32■■■□□ 2.12
CPNE9-204ENST00000491802 NAA16Q6N069 864 aaPredicted RBP28.32■■■□□ 2.12
CPNE9-204ENST00000491802 ARMC9Q7Z3E5 817 aa28.32■■■□□ 2.12
CPNE9-204ENST00000491802 GCC1Q96CN9 775 aa28.32■■■□□ 2.12
CPNE9-204ENST00000491802 TMEM39BQ9GZU3 492 aa28.32■■■□□ 2.12
CPNE9-204ENST00000491802 SLC10A3P09131 477 aa28.31■■■□□ 2.12
CPNE9-204ENST00000491802 ATP5JP18859 108 aa28.31■■■□□ 2.12
CPNE9-204ENST00000491802 LDLRAD1Q5T700 205 aa28.31■■■□□ 2.12
CPNE9-204ENST00000491802 NBPF12Q5TAG4 269 aaPredicted RBP28.31■■■□□ 2.12
CPNE9-204ENST00000491802 MOB2Q70IA6 237 aa28.31■■■□□ 2.12
CPNE9-204ENST00000491802 CDAN1Q8IWY9 1227 aa28.31■■■□□ 2.12
CPNE9-204ENST00000491802 WBP1LQ9NX94 342 aa28.31■■■□□ 2.12
CPNE9-204ENST00000491802 DOCK2Q92608 1830 aa28.31■■■□□ 2.12
CPNE9-204ENST00000491802 MYO5AQ9Y4I1 1855 aaKnown RBP28.3■■■□□ 2.12
CPNE9-204ENST00000491802 GPR75-ASB3A0A0A6YYF3 556 aa28.3■■■□□ 2.12
CPNE9-204ENST00000491802 PPP1R12BO60237 982 aaPredicted RBP28.3■■■□□ 2.12
CPNE9-204ENST00000491802 HSPA1AP0DMV8 641 aaKnown RBP28.3■■■□□ 2.12
CPNE9-204ENST00000491802 HSPA1BP0DMV9 641 aaKnown RBP28.3■■■□□ 2.12
CPNE9-204ENST00000491802 ZNF157P51786 506 aaPredicted RBP28.3■■■□□ 2.12
CPNE9-204ENST00000491802 GRM1Q13255 1194 aa28.3■■■□□ 2.12
CPNE9-204ENST00000491802 PRKG1Q13976 671 aa28.3■■■□□ 2.12
CPNE9-204ENST00000491802 GPATCH3Q96I76 525 aa28.3■■■□□ 2.12
CPNE9-204ENST00000491802 BOLA2Q9H3K6 86 aa28.3■■■□□ 2.12
CPNE9-204ENST00000491802 RWDD1Q9H446 243 aaPredicted RBP28.3■■■□□ 2.12
CPNE9-204ENST00000491802 ECHDC1Q9NTX5 307 aa28.3■■■□□ 2.12
CPNE9-204ENST00000491802 RFX7Q2KHR2 1363 aa28.29■■■□□ 2.12
CPNE9-204ENST00000491802 GOLIM4O00461 696 aa28.29■■■□□ 2.12
CPNE9-204ENST00000491802 NFIAQ12857 509 aa28.29■■■□□ 2.12
CPNE9-204ENST00000491802 ZBTB47Q9UFB7 747 aaPredicted RBP28.29■■■□□ 2.12
CPNE9-204ENST00000491802 LAMB1P07942 1786 aa28.29■■■□□ 2.12
CPNE9-204ENST00000491802 MAP4K4O95819 1239 aaPredicted RBP28.28■■■□□ 2.12
CPNE9-204ENST00000491802 TTF1Q15361 905 aaPredicted RBP28.28■■■□□ 2.12
CPNE9-204ENST00000491802 FZD1Q9UP38 647 aa28.28■■■□□ 2.12
CPNE9-204ENST00000491802 UBE2Q2LH0YL09 131 aa28.27■■■□□ 2.12
CPNE9-204ENST00000491802 TCP10Q12799 353 aa28.27■■■□□ 2.12
CPNE9-204ENST00000491802 MAP3K12Q12852 859 aa28.27■■■□□ 2.12
CPNE9-204ENST00000491802 ANKRD45Q5TZF3 282 aa28.27■■■□□ 2.12
CPNE9-204ENST00000491802 TSHZ3Q63HK5 1081 aa28.27■■■□□ 2.12
CPNE9-204ENST00000491802 RASAL3Q86YV0 1011 aa28.27■■■□□ 2.12
CPNE9-204ENST00000491802 EDC3Q96F86 508 aaKnown RBP28.27■■■□□ 2.12
CPNE9-204ENST00000491802 HAUS7Q99871 368 aa28.27■■■□□ 2.12
CPNE9-204ENST00000491802 NOL10Q9BSC4 688 aaKnown RBP28.27■■■□□ 2.12
CPNE9-204ENST00000491802 IDI2Q9BXS1 227 aa28.27■■■□□ 2.12
CPNE9-204ENST00000491802 FAM198AQ9UFP1 575 aa28.27■■■□□ 2.12
CPNE9-204ENST00000491802 OTOFQ9HC10 1997 aa28.26■■■□□ 2.11
CPNE9-204ENST00000491802 AOC2O75106 756 aa28.26■■■□□ 2.11
CPNE9-204ENST00000491802 IGHDP01880 384 aa28.26■■■□□ 2.11
CPNE9-204ENST00000491802 RHBDL3P58872 404 aa28.26■■■□□ 2.11
CPNE9-204ENST00000491802 TMED8Q6PL24 325 aaPredicted RBP28.26■■■□□ 2.11
CPNE9-204ENST00000491802 ADGRA1Q86SQ6 560 aa28.26■■■□□ 2.11
CPNE9-204ENST00000491802 FAM151AQ8WW52 585 aa28.26■■■□□ 2.11
CPNE9-204ENST00000491802 PAG1Q9NWQ8 432 aa28.26■■■□□ 2.11
CPNE9-204ENST00000491802 ANGEL1Q9UNK9 670 aaKnown RBP28.26■■■□□ 2.11
CPNE9-204ENST00000491802 REM2Q8IYK8 340 aaPredicted RBP28.25■■■□□ 2.11
CPNE9-204ENST00000491802 MAGEB6Q8N7X4 407 aa28.25■■■□□ 2.11
CPNE9-204ENST00000491802 OTUD7AQ8TE49 926 aaPredicted RBP28.25■■■□□ 2.11
CPNE9-204ENST00000491802 HOOK2Q96ED9 719 aa28.25■■■□□ 2.11
CPNE9-204ENST00000491802 NPM3O75607 178 aaKnown RBP28.24■■■□□ 2.11
CPNE9-204ENST00000491802 WDHD1O75717 1129 aaPredicted RBP28.24■■■□□ 2.11
CPNE9-204ENST00000491802 CYP7A1P22680 504 aa28.24■■■□□ 2.11
CPNE9-204ENST00000491802 RGS3P49796 1198 aa28.24■■■□□ 2.11
CPNE9-204ENST00000491802 SMC5Q8IY18 1101 aa28.24■■■□□ 2.11
CPNE9-204ENST00000491802 AATFQ9NY61 560 aaKnown RBP eCLIP28.24■■■□□ 2.11
CPNE9-204ENST00000491802 USP2O75604 605 aaPredicted RBP28.23■■■□□ 2.11
CPNE9-204ENST00000491802 IREB2P48200 963 aaKnown RBP28.23■■■□□ 2.11
CPNE9-204ENST00000491802 PICALMQ13492 652 aa28.23■■■□□ 2.11
CPNE9-204ENST00000491802 ENTPD3O75355 529 aa28.22■■■□□ 2.11
CPNE9-204ENST00000491802 BAG3O95817 575 aa28.22■■■□□ 2.11
CPNE9-204ENST00000491802 DDX4Q9NQI0 724 aaKnown RBP28.22■■■□□ 2.11
CPNE9-204ENST00000491802 TTC41PQ6P2S7 1318 aa28.21■■■□□ 2.11
CPNE9-204ENST00000491802 ZFPM1Q8IX07 1006 aa28.21■■■□□ 2.11
CPNE9-204ENST00000491802 TEX11Q8IYF3 940 aa28.21■■■□□ 2.11
CPNE9-204ENST00000491802 SH3RF3Q8TEJ3 882 aaPredicted RBP28.21■■■□□ 2.11
CPNE9-204ENST00000491802 AIDAQ96BJ3 306 aa28.21■■■□□ 2.11
CPNE9-204ENST00000491802 AK9Q5TCS8 1911 aa28.21■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms