RNA–Protein interactions for RNA: ENST00000491651.1

SMARCD3-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 4

Gene SMARCD3, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-214ENST00000491651 RPAP2Q8IXW5 612 aaPredicted RBP21.53■■□□□ 1.04
SMARCD3-214ENST00000491651 TNS4Q8IZW8 715 aa21.53■■□□□ 1.04
SMARCD3-214ENST00000491651 SPATA5Q8NB90 893 aa21.53■■□□□ 1.04
SMARCD3-214ENST00000491651 TEPSINQ96N21 525 aa21.53■■□□□ 1.04
SMARCD3-214ENST00000491651 TMEM39BQ9GZU3 492 aa21.53■■□□□ 1.04
SMARCD3-214ENST00000491651 ZBTB40Q9NUA8 1239 aa21.53■■□□□ 1.04
SMARCD3-214ENST00000491651 SAGE1Q9NXZ1 904 aa21.53■■□□□ 1.04
SMARCD3-214ENST00000491651 HMG20BQ9P0W2 317 aa21.53■■□□□ 1.04
SMARCD3-214ENST00000491651 TTC39AQ5SRH9 613 aa21.52■■□□□ 1.04
SMARCD3-214ENST00000491651 HOOK2Q96ED9 719 aa21.52■■□□□ 1.04
SMARCD3-214ENST00000491651 FZD1Q9UP38 647 aa21.52■■□□□ 1.04
SMARCD3-214ENST00000491651 GAKO14976 1311 aa21.52■■□□□ 1.03
SMARCD3-214ENST00000491651 ANKRD13AQ8IZ07 590 aa21.51■■□□□ 1.03
SMARCD3-214ENST00000491651 CSRNP1Q96S65 589 aa21.51■■□□□ 1.03
SMARCD3-214ENST00000491651 DBNDD2Q9BQY9 259 aa21.51■■□□□ 1.03
SMARCD3-214ENST00000491651 CDK5RAP2Q96SN8 1893 aa21.51■■□□□ 1.03
SMARCD3-214ENST00000491651 USP2O75604 605 aaPredicted RBP21.5■■□□□ 1.03
SMARCD3-214ENST00000491651 MCAMP43121 646 aa21.5■■□□□ 1.03
SMARCD3-214ENST00000491651 CDC42EP5Q6NZY7 148 aa21.5■■□□□ 1.03
SMARCD3-214ENST00000491651 SLC10A4Q96EP9 437 aa21.5■■□□□ 1.03
SMARCD3-214ENST00000491651 TSKSQ9UJT2 592 aa21.5■■□□□ 1.03
SMARCD3-214ENST00000491651 EXOC6BQ9Y2D4 811 aa21.5■■□□□ 1.03
SMARCD3-214ENST00000491651 ZBTB48P10074 688 aaPredicted RBP21.49■■□□□ 1.03
SMARCD3-214ENST00000491651 SREBF2Q12772 1141 aa21.49■■□□□ 1.03
SMARCD3-214ENST00000491651 SPRYD7Q5W111 196 aa21.49■■□□□ 1.03
SMARCD3-214ENST00000491651 PI16Q6UXB8 463 aa21.49■■□□□ 1.03
SMARCD3-214ENST00000491651 FAM163AQ96GL9 167 aaPredicted RBP21.49■■□□□ 1.03
SMARCD3-214ENST00000491651 USP40Q9NVE5 1235 aa21.49■■□□□ 1.03
SMARCD3-214ENST00000491651 FOCADQ5VW36 1801 aa21.49■■□□□ 1.03
SMARCD3-214ENST00000491651 GSTO1P78417 241 aa21.48■■□□□ 1.03
SMARCD3-214ENST00000491651 CDAN1Q8IWY9 1227 aa21.48■■□□□ 1.03
SMARCD3-214ENST00000491651 FAM151AQ8WW52 585 aa21.48■■□□□ 1.03
SMARCD3-214ENST00000491651 ZNF512BQ96KM6 892 aaPredicted RBP21.48■■□□□ 1.03
SMARCD3-214ENST00000491651 MROH7-TTC4A0A0A0MT08 1334 aa21.48■■□□□ 1.03
SMARCD3-214ENST00000491651 LDHCP07864 332 aa21.47■■□□□ 1.03
SMARCD3-214ENST00000491651 MECOMQ03112 1051 aa21.47■■□□□ 1.03
SMARCD3-214ENST00000491651 MKRN3Q13064 507 aaKnown RBP21.47■■□□□ 1.03
SMARCD3-214ENST00000491651 C20orf194Q5TEA3 1177 aa21.47■■□□□ 1.03
SMARCD3-214ENST00000491651 DCAF15Q66K64 600 aa21.47■■□□□ 1.03
SMARCD3-214ENST00000491651 WNK4Q96J92 1243 aa21.47■■□□□ 1.03
SMARCD3-214ENST00000491651 CLMNQ96JQ2 1002 aa21.47■■□□□ 1.03
SMARCD3-214ENST00000491651 RNF186Q9NXI6 227 aa21.47■■□□□ 1.03
SMARCD3-214ENST00000491651 DBNLQ9UJU6 430 aaKnown RBP21.47■■□□□ 1.03
SMARCD3-214ENST00000491651 IGSF3O75054 1194 aa21.46■■□□□ 1.03
SMARCD3-214ENST00000491651 EAF2Q96CJ1 260 aaPredicted RBP21.46■■□□□ 1.03
SMARCD3-214ENST00000491651 RAI14Q9P0K7 980 aa21.46■■□□□ 1.03
SMARCD3-214ENST00000491651 RFX7Q2KHR2 1363 aa21.46■■□□□ 1.03
SMARCD3-214ENST00000491651 MANSC4A6NHS7 340 aaPredicted RBP21.45■■□□□ 1.02
SMARCD3-214ENST00000491651 TRPA1O75762 1119 aa21.45■■□□□ 1.02
SMARCD3-214ENST00000491651 BTDP43251 543 aa21.45■■□□□ 1.02
SMARCD3-214ENST00000491651 TM4SF4P48230 202 aa21.45■■□□□ 1.02
SMARCD3-214ENST00000491651 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.45■■□□□ 1.02
SMARCD3-214ENST00000491651 KIF1BPQ96EK5 621 aa21.45■■□□□ 1.02
SMARCD3-214ENST00000491651 CCDC8Q9H0W5 538 aaPredicted RBP21.45■■□□□ 1.02
SMARCD3-214ENST00000491651 LRP2BPQ9P2M1 347 aa21.45■■□□□ 1.02
SMARCD3-214ENST00000491651 CSADQ9Y600 493 aa21.45■■□□□ 1.02
SMARCD3-214ENST00000491651 MAP4K4O95819 1239 aaPredicted RBP21.44■■□□□ 1.02
SMARCD3-214ENST00000491651 MAP3K9P80192 1104 aa21.44■■□□□ 1.02
SMARCD3-214ENST00000491651 TCP10Q12799 353 aa21.44■■□□□ 1.02
SMARCD3-214ENST00000491651 NFIAQ12857 509 aa21.44■■□□□ 1.02
SMARCD3-214ENST00000491651 TBC1D9Q6ZT07 1266 aa21.44■■□□□ 1.02
SMARCD3-214ENST00000491651 AACSQ86V21 672 aa21.44■■□□□ 1.02
SMARCD3-214ENST00000491651 SIRT2Q8IXJ6 389 aa21.44■■□□□ 1.02
SMARCD3-214ENST00000491651 RHPN1Q8TCX5 695 aa21.44■■□□□ 1.02
SMARCD3-214ENST00000491651 NSUN4Q96CB9 384 aaKnown RBP21.44■■□□□ 1.02
SMARCD3-214ENST00000491651 YTHDC1Q96MU7 727 aaKnown RBP21.44■■□□□ 1.02
SMARCD3-214ENST00000491651 IDI2Q9BXS1 227 aa21.44■■□□□ 1.02
SMARCD3-214ENST00000491651 TLR7Q9NYK1 1049 aaKnown RBP21.44■■□□□ 1.02
SMARCD3-214ENST00000491651 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.44■■□□□ 1.02
SMARCD3-214ENST00000491651 FAM198AQ9UFP1 575 aa21.44■■□□□ 1.02
SMARCD3-214ENST00000491651 MYH7P12883 1935 aa21.43■■□□□ 1.02
SMARCD3-214ENST00000491651 GPR75-ASB3A0A0A6YYF3 556 aa21.43■■□□□ 1.02
SMARCD3-214ENST00000491651 RAB11FIP3O75154 756 aa21.43■■□□□ 1.02
SMARCD3-214ENST00000491651 ENTPD3O75355 529 aa21.43■■□□□ 1.02
SMARCD3-214ENST00000491651 INHBEP58166 350 aa21.43■■□□□ 1.02
SMARCD3-214ENST00000491651 CLASRPQ8N2M8 674 aaKnown RBP21.43■■□□□ 1.02
SMARCD3-214ENST00000491651 ELP3Q9H9T3 547 aa21.43■■□□□ 1.02
SMARCD3-214ENST00000491651 SNRKQ9NRH2 765 aa21.43■■□□□ 1.02
SMARCD3-214ENST00000491651 DOCK1Q14185 1865 aa21.43■■□□□ 1.02
SMARCD3-214ENST00000491651 RGS3P49796 1198 aa21.42■■□□□ 1.02
SMARCD3-214ENST00000491651 VGLL4Q14135 290 aa21.42■■□□□ 1.02
SMARCD3-214ENST00000491651 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.42■■□□□ 1.02
SMARCD3-214ENST00000491651 WRNIP1Q96S55 665 aa21.42■■□□□ 1.02
SMARCD3-214ENST00000491651 NOL10Q9BSC4 688 aaKnown RBP21.42■■□□□ 1.02
SMARCD3-214ENST00000491651 ZNF341Q9BYN7 854 aa21.42■■□□□ 1.02
SMARCD3-214ENST00000491651 IL1RAPL2Q9NP60 686 aa21.42■■□□□ 1.02
SMARCD3-214ENST00000491651 ATAD5Q96QE3 1844 aa21.41■■□□□ 1.02
SMARCD3-214ENST00000491651 ALDH1A1P00352 501 aa21.41■■□□□ 1.02
SMARCD3-214ENST00000491651 ZNF384Q8TF68 577 aa21.41■■□□□ 1.02
SMARCD3-214ENST00000491651 OPTNQ96CV9 577 aa21.41■■□□□ 1.02
SMARCD3-214ENST00000491651 MYH1P12882 1939 aa21.41■■□□□ 1.02
SMARCD3-214ENST00000491651 CYP2E1P05181 493 aaPredicted RBP21.4■■□□□ 1.02
SMARCD3-214ENST00000491651 ZAP70P43403 619 aa21.4■■□□□ 1.02
SMARCD3-214ENST00000491651 NAA16Q6N069 864 aaPredicted RBP21.4■■□□□ 1.02
SMARCD3-214ENST00000491651 COL2A1P02458 1487 aaPredicted RBP21.39■■□□□ 1.02
SMARCD3-214ENST00000491651 APBB1O00213 710 aa21.39■■□□□ 1.01
SMARCD3-214ENST00000491651 NPM3O75607 178 aaKnown RBP21.39■■□□□ 1.01
SMARCD3-214ENST00000491651 WDHD1O75717 1129 aaPredicted RBP21.39■■□□□ 1.01
SMARCD3-214ENST00000491651 GJA5P36382 358 aa21.39■■□□□ 1.01
SMARCD3-214ENST00000491651 RRP1P56182 461 aaKnown RBP21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms