RNA–Protein interactions for RNA: ENST00000491467.1

SRGAP3-210, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-210ENST00000491467 A0A0D9SFI3 127 aa14.22□□□□□ -0.13
SRGAP3-210ENST00000491467 A0A1W2PPC1 479 aa14.22□□□□□ -0.13
SRGAP3-210ENST00000491467 SLC27A2O14975 620 aa14.22□□□□□ -0.13
SRGAP3-210ENST00000491467 TAF5LO75529 589 aa14.22□□□□□ -0.13
SRGAP3-210ENST00000491467 BAG4O95429 457 aaKnown RBP14.22□□□□□ -0.13
SRGAP3-210ENST00000491467 CASTP20810 708 aaKnown RBP14.22□□□□□ -0.13
SRGAP3-210ENST00000491467 ITGA6P23229 1130 aa14.22□□□□□ -0.13
SRGAP3-210ENST00000491467 L1TD1Q5T7N2 865 aaKnown RBP14.22□□□□□ -0.13
SRGAP3-210ENST00000491467 GORABQ5T7V8 394 aa14.22□□□□□ -0.13
SRGAP3-210ENST00000491467 LDHAL6AQ6ZMR3 332 aa14.22□□□□□ -0.13
SRGAP3-210ENST00000491467 KRT26Q7Z3Y9 468 aa14.22□□□□□ -0.13
SRGAP3-210ENST00000491467 ZNF594Q96JF6 807 aaPredicted RBP14.22□□□□□ -0.13
SRGAP3-210ENST00000491467 DSCC1Q9BVC3 393 aa14.22□□□□□ -0.13
SRGAP3-210ENST00000491467 PDRG1Q9NUG6 133 aa14.22□□□□□ -0.13
SRGAP3-210ENST00000491467 RPAP1Q9BWH6 1393 aaPredicted RBP14.22□□□□□ -0.13
SRGAP3-210ENST00000491467 MROH5Q6ZUA9 1318 aa14.21□□□□□ -0.13
SRGAP3-210ENST00000491467 SCN7AQ01118 1682 aa14.21□□□□□ -0.13
SRGAP3-210ENST00000491467 GPTP24298 496 aa14.21□□□□□ -0.13
SRGAP3-210ENST00000491467 SLC4A8Q2Y0W8 1093 aa14.21□□□□□ -0.13
SRGAP3-210ENST00000491467 TTC39AQ5SRH9 613 aa14.21□□□□□ -0.13
SRGAP3-210ENST00000491467 JAKMIP1Q96N16 626 aaKnown RBP14.21□□□□□ -0.13
SRGAP3-210ENST00000491467 DNAJC2Q99543 621 aaKnown RBP14.21□□□□□ -0.13
SRGAP3-210ENST00000491467 UTP14AQ9BVJ6 771 aaKnown RBP14.21□□□□□ -0.13
SRGAP3-210ENST00000491467 PUS3Q9BZE2 481 aaKnown RBP14.21□□□□□ -0.13
SRGAP3-210ENST00000491467 UPF3BQ9BZI7 483 aaKnown RBP14.21□□□□□ -0.13
SRGAP3-210ENST00000491467 TBC1D2BQ9UPU7 963 aa14.21□□□□□ -0.13
SRGAP3-210ENST00000491467 SPTBN5Q9NRC6 3674 aaKnown RBP14.21□□□□□ -0.14
SRGAP3-210ENST00000491467 RNF113AO15541 343 aaKnown RBP14.2□□□□□ -0.14
SRGAP3-210ENST00000491467 CAMTA2O94983 1202 aa14.2□□□□□ -0.14
SRGAP3-210ENST00000491467 HMGB1P09429 215 aaKnown RBP14.2□□□□□ -0.14
SRGAP3-210ENST00000491467 ALDH1B1P30837 517 aa14.2□□□□□ -0.14
SRGAP3-210ENST00000491467 AK2P54819 239 aa14.2□□□□□ -0.14
SRGAP3-210ENST00000491467 TTF1Q15361 905 aaPredicted RBP14.2□□□□□ -0.14
SRGAP3-210ENST00000491467 ZMYM1Q5SVZ6 1142 aa14.2□□□□□ -0.14
SRGAP3-210ENST00000491467 ZSCAN25Q6NSZ9 544 aa14.2□□□□□ -0.14
SRGAP3-210ENST00000491467 BLOC1S2Q6QNY1 142 aa14.2□□□□□ -0.14
SRGAP3-210ENST00000491467 ZGPATQ8N5A5 531 aaKnown RBP14.2□□□□□ -0.14
SRGAP3-210ENST00000491467 ARMC5Q96C12 935 aa14.2□□□□□ -0.14
SRGAP3-210ENST00000491467 CHMP4CQ96CF2 233 aa14.2□□□□□ -0.14
SRGAP3-210ENST00000491467 XAGE2Q96GT9 111 aa14.2□□□□□ -0.14
SRGAP3-210ENST00000491467 PTPN22Q9Y2R2 807 aa14.2□□□□□ -0.14
SRGAP3-210ENST00000491467 BRD1O95696 1058 aa14.19□□□□□ -0.14
SRGAP3-210ENST00000491467 UQCRFS1P1P0C7P4 283 aa14.19□□□□□ -0.14
SRGAP3-210ENST00000491467 ATP2B3Q16720 1220 aa14.19□□□□□ -0.14
SRGAP3-210ENST00000491467 METTL24Q5JXM2 366 aa14.19□□□□□ -0.14
SRGAP3-210ENST00000491467 SNX27Q96L92 541 aa14.19□□□□□ -0.14
SRGAP3-210ENST00000491467 R3HDMLQ9H3Y0 253 aa14.19□□□□□ -0.14
SRGAP3-210ENST00000491467 CNNM1Q9NRU3 951 aa14.19□□□□□ -0.14
SRGAP3-210ENST00000491467 DOCK2Q92608 1830 aa14.19□□□□□ -0.14
SRGAP3-210ENST00000491467 ADM5C9JUS6 153 aa14.18□□□□□ -0.14
SRGAP3-210ENST00000491467 GOLIM4O00461 696 aa14.18□□□□□ -0.14
SRGAP3-210ENST00000491467 PDE8BO95263 885 aa14.18□□□□□ -0.14
SRGAP3-210ENST00000491467 CXCL9Q07325 125 aa14.18□□□□□ -0.14
SRGAP3-210ENST00000491467 CCDC152Q4G0S7 254 aa14.18□□□□□ -0.14
SRGAP3-210ENST00000491467 GREM2Q9H772 168 aa14.18□□□□□ -0.14
SRGAP3-210ENST00000491467 MTMR10Q9NXD2 777 aa14.18□□□□□ -0.14
SRGAP3-210ENST00000491467 UBN2Q6ZU65 1347 aa14.17□□□□□ -0.14
SRGAP3-210ENST00000491467 MYO5AQ9Y4I1 1855 aaKnown RBP14.17□□□□□ -0.14
SRGAP3-210ENST00000491467 WTIPA6NIX2 430 aaPredicted RBP14.17□□□□□ -0.14
SRGAP3-210ENST00000491467 H7C1D1 291 aa14.17□□□□□ -0.14
SRGAP3-210ENST00000491467 RPS6KB1P23443 525 aa14.17□□□□□ -0.14
SRGAP3-210ENST00000491467 TM4SF4P48230 202 aa14.17□□□□□ -0.14
SRGAP3-210ENST00000491467 KLHL40Q2TBA0 621 aa14.17□□□□□ -0.14
SRGAP3-210ENST00000491467 SUSD4Q5VX71 490 aa14.17□□□□□ -0.14
SRGAP3-210ENST00000491467 GPR153Q6NV75 609 aa14.17□□□□□ -0.14
SRGAP3-210ENST00000491467 DDX46Q7L014 1031 aaKnown RBP14.17□□□□□ -0.14
SRGAP3-210ENST00000491467 VGLL2Q8N8G2 317 aa14.17□□□□□ -0.14
SRGAP3-210ENST00000491467 DCPSQ96C86 337 aaKnown RBP14.17□□□□□ -0.14
SRGAP3-210ENST00000491467 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.17□□□□□ -0.14
SRGAP3-210ENST00000491467 CTNNA3Q9UI47 895 aa14.17□□□□□ -0.14
SRGAP3-210ENST00000491467 CNOT7Q9UIV1 285 aaKnown RBP14.17□□□□□ -0.14
SRGAP3-210ENST00000491467 ATP6V1DQ9Y5K8 247 aa14.17□□□□□ -0.14
SRGAP3-210ENST00000491467 A0A1B0GUL6 1792 aa14.17□□□□□ -0.14
SRGAP3-210ENST00000491467 RIC1Q4ADV7 1423 aa14.16□□□□□ -0.14
SRGAP3-210ENST00000491467 PPIP5K2O43314 1243 aa14.16□□□□□ -0.14
SRGAP3-210ENST00000491467 ADCK5Q3MIX3 580 aa14.16□□□□□ -0.14
SRGAP3-210ENST00000491467 ZNF589Q86UQ0 364 aaPredicted RBP14.16□□□□□ -0.14
SRGAP3-210ENST00000491467 LPIN2Q92539 896 aa14.16□□□□□ -0.14
SRGAP3-210ENST00000491467 EDC3Q96F86 508 aaKnown RBP14.16□□□□□ -0.14
SRGAP3-210ENST00000491467 SMC3Q9UQE7 1217 aa14.16□□□□□ -0.14
SRGAP3-210ENST00000491467 ZDHHC9Q9Y397 364 aa14.16□□□□□ -0.14
SRGAP3-210ENST00000491467 MYCP01106 439 aaPredicted RBP14.15□□□□□ -0.14
SRGAP3-210ENST00000491467 PUM3Q15397 648 aaKnown RBP14.15□□□□□ -0.14
SRGAP3-210ENST00000491467 CC2D2BQ6DHV5 1058 aa14.15□□□□□ -0.14
SRGAP3-210ENST00000491467 NBPF5PQ86XG9 351 aaPredicted RBP14.15□□□□□ -0.14
SRGAP3-210ENST00000491467 NEK1Q96PY6 1258 aa14.15□□□□□ -0.14
SRGAP3-210ENST00000491467 NIP7Q9Y221 180 aaKnown RBP eCLIP14.15□□□□□ -0.14
SRGAP3-210ENST00000491467 NR2E3Q9Y5X4 410 aa14.15□□□□□ -0.14
SRGAP3-210ENST00000491467 LAMA3Q16787 3333 aa14.15□□□□□ -0.14
SRGAP3-210ENST00000491467 SNED1Q8TER0 1413 aa14.15□□□□□ -0.14
SRGAP3-210ENST00000491467 SHTN1A0MZ66 631 aa14.14□□□□□ -0.15
SRGAP3-210ENST00000491467 NTSR2O95665 410 aa14.14□□□□□ -0.15
SRGAP3-210ENST00000491467 SLC5A1P13866 664 aa14.14□□□□□ -0.15
SRGAP3-210ENST00000491467 PDCP20941 246 aa14.14□□□□□ -0.15
SRGAP3-210ENST00000491467 FGFR2P21802 821 aa14.14□□□□□ -0.15
SRGAP3-210ENST00000491467 ARID4AP29374 1257 aaPredicted RBP14.14□□□□□ -0.15
SRGAP3-210ENST00000491467 IGHMBP2P38935 993 aaKnown RBP14.14□□□□□ -0.15
SRGAP3-210ENST00000491467 AOC3Q16853 763 aa14.14□□□□□ -0.15
SRGAP3-210ENST00000491467 MCTP1Q6DN14 999 aa14.14□□□□□ -0.15
SRGAP3-210ENST00000491467 NBPF11Q86T75 865 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms