RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 HOOK2Q96ED9 719 aa10.22□□□□□ -0.77
LSM2-213ENST00000491421 XAGE2Q96GT9 111 aa10.22□□□□□ -0.77
LSM2-213ENST00000491421 ZBED9Q6R2W3 1325 aa10.22□□□□□ -0.77
LSM2-213ENST00000491421 ZBTB22O15209 634 aa10.21□□□□□ -0.77
LSM2-213ENST00000491421 FKTNO75072 461 aa10.21□□□□□ -0.77
LSM2-213ENST00000491421 G3BP1Q13283 466 aaKnown RBP eCLIP10.21□□□□□ -0.77
LSM2-213ENST00000491421 GORABQ5T7V8 394 aa10.21□□□□□ -0.77
LSM2-213ENST00000491421 DCAF15Q66K64 600 aa10.21□□□□□ -0.77
LSM2-213ENST00000491421 OTUD7BQ6GQQ9 843 aa10.21□□□□□ -0.77
LSM2-213ENST00000491421 DZIP1Q86YF9 867 aaKnown RBP10.21□□□□□ -0.77
LSM2-213ENST00000491421 ITPRIPQ8IWB1 547 aa10.21□□□□□ -0.77
LSM2-213ENST00000491421 NEUROD6Q96NK8 337 aa10.21□□□□□ -0.77
LSM2-213ENST00000491421 WRNIP1Q96S55 665 aa10.21□□□□□ -0.77
LSM2-213ENST00000491421 R3HDMLQ9H3Y0 253 aa10.21□□□□□ -0.77
LSM2-213ENST00000491421 ABCF2Q9UG63 623 aa10.21□□□□□ -0.77
LSM2-213ENST00000491421 PDS5AQ29RF7 1337 aaKnown RBP10.21□□□□□ -0.78
LSM2-213ENST00000491421 RPAP1Q9BWH6 1393 aaPredicted RBP10.21□□□□□ -0.78
LSM2-213ENST00000491421 CASP8AP2Q9UKL3 1982 aa10.21□□□□□ -0.78
LSM2-213ENST00000491421 TCP10Q12799 353 aa10.2□□□□□ -0.78
LSM2-213ENST00000491421 OS9Q13438 667 aaPredicted RBP10.2□□□□□ -0.78
LSM2-213ENST00000491421 PKN2Q16513 984 aaKnown RBP10.2□□□□□ -0.78
LSM2-213ENST00000491421 SPTY2D1Q68D10 685 aaPredicted RBP10.2□□□□□ -0.78
LSM2-213ENST00000491421 FAM151AQ8WW52 585 aa10.2□□□□□ -0.78
LSM2-213ENST00000491421 CNKSR2Q8WXI2 1034 aa10.2□□□□□ -0.78
LSM2-213ENST00000491421 OTUD5Q96G74 571 aa10.2□□□□□ -0.78
LSM2-213ENST00000491421 USP40Q9NVE5 1235 aa10.2□□□□□ -0.78
LSM2-213ENST00000491421 TAOK2Q9UL54 1235 aa10.2□□□□□ -0.78
LSM2-213ENST00000491421 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.2□□□□□ -0.78
LSM2-213ENST00000491421 AKAP11Q9UKA4 1901 aa10.19□□□□□ -0.78
LSM2-213ENST00000491421 TESPA1A2RU30 521 aaPredicted RBP10.19□□□□□ -0.78
LSM2-213ENST00000491421 SPDYE5A6NIY4 337 aa10.19□□□□□ -0.78
LSM2-213ENST00000491421 RLBP1P12271 317 aa10.19□□□□□ -0.78
LSM2-213ENST00000491421 GTF2A2P52657 109 aa10.19□□□□□ -0.78
LSM2-213ENST00000491421 NFIAQ12857 509 aa10.19□□□□□ -0.78
LSM2-213ENST00000491421 POLA2Q14181 598 aa10.19□□□□□ -0.78
LSM2-213ENST00000491421 MIGA2Q7L4E1 593 aa10.19□□□□□ -0.78
LSM2-213ENST00000491421 SLF2Q8IX21 1173 aa10.19□□□□□ -0.78
LSM2-213ENST00000491421 ZKSCAN4Q969J2 545 aaPredicted RBP10.19□□□□□ -0.78
LSM2-213ENST00000491421 MS4A4AQ96JQ5 239 aa10.19□□□□□ -0.78
LSM2-213ENST00000491421 PTPN18Q99952 460 aa10.19□□□□□ -0.78
LSM2-213ENST00000491421 ZNF341Q9BYN7 854 aa10.19□□□□□ -0.78
LSM2-213ENST00000491421 C1orf115Q9H7X2 142 aa10.19□□□□□ -0.78
LSM2-213ENST00000491421 SNCAIPQ9Y6H5 919 aa10.19□□□□□ -0.78
LSM2-213ENST00000491421 GAKO14976 1311 aa10.18□□□□□ -0.78
LSM2-213ENST00000491421 CCL15-CCL14A0A0B4J2E2 113 aa10.18□□□□□ -0.78
LSM2-213ENST00000491421 SURF6O75683 361 aaKnown RBP10.18□□□□□ -0.78
LSM2-213ENST00000491421 ARID4AP29374 1257 aaPredicted RBP10.18□□□□□ -0.78
LSM2-213ENST00000491421 ATP8B2P98198 1209 aa10.18□□□□□ -0.78
LSM2-213ENST00000491421 CRHR2Q13324 411 aa10.18□□□□□ -0.78
LSM2-213ENST00000491421 CCL15Q16663 113 aa10.18□□□□□ -0.78
LSM2-213ENST00000491421 PI16Q6UXB8 463 aa10.18□□□□□ -0.78
LSM2-213ENST00000491421 ERICH6Q7L0X2 663 aa10.18□□□□□ -0.78
LSM2-213ENST00000491421 ERO1BQ86YB8 467 aa10.18□□□□□ -0.78
LSM2-213ENST00000491421 SPATA5Q8NB90 893 aa10.18□□□□□ -0.78
LSM2-213ENST00000491421 SSH3Q8TE77 659 aa10.18□□□□□ -0.78
LSM2-213ENST00000491421 BRI3BPQ8WY22 251 aa10.18□□□□□ -0.78
LSM2-213ENST00000491421 HMG20BQ9P0W2 317 aa10.18□□□□□ -0.78
LSM2-213ENST00000491421 FAM198AQ9UFP1 575 aa10.18□□□□□ -0.78
LSM2-213ENST00000491421 HPS5Q9UPZ3 1129 aa10.18□□□□□ -0.78
LSM2-213ENST00000491421 MROH7-TTC4A0A0A0MT08 1334 aa10.17□□□□□ -0.78
LSM2-213ENST00000491421 ZBTB7BO15156 539 aaPredicted RBP10.17□□□□□ -0.78
LSM2-213ENST00000491421 ENTPD3O75355 529 aa10.17□□□□□ -0.78
LSM2-213ENST00000491421 UQCRFS1P1P0C7P4 283 aa10.17□□□□□ -0.78
LSM2-213ENST00000491421 CETPP11597 493 aa10.17□□□□□ -0.78
LSM2-213ENST00000491421 INPP5BP32019 993 aa10.17□□□□□ -0.78
LSM2-213ENST00000491421 BTDP43251 543 aa10.17□□□□□ -0.78
LSM2-213ENST00000491421 RGS19P49795 217 aa10.17□□□□□ -0.78
LSM2-213ENST00000491421 RGS3P49796 1198 aa10.17□□□□□ -0.78
LSM2-213ENST00000491421 MLLT1Q03111 559 aaPredicted RBP10.17□□□□□ -0.78
LSM2-213ENST00000491421 MECOMQ03112 1051 aa10.17□□□□□ -0.78
LSM2-213ENST00000491421 SNAPC2Q13487 334 aa10.17□□□□□ -0.78
LSM2-213ENST00000491421 TNNI3KQ59H18 835 aa10.17□□□□□ -0.78
LSM2-213ENST00000491421 FAM163AQ96GL9 167 aaPredicted RBP10.17□□□□□ -0.78
LSM2-213ENST00000491421 IDI2Q9BXS1 227 aa10.17□□□□□ -0.78
LSM2-213ENST00000491421 GPR108Q9NPR9 543 aa10.17□□□□□ -0.78
LSM2-213ENST00000491421 FPGT-TNNI3KV9GXZ4 949 aa10.17□□□□□ -0.78
LSM2-213ENST00000491421 OTOFQ9HC10 1997 aa10.17□□□□□ -0.78
LSM2-213ENST00000491421 IRF6O14896 467 aa10.16□□□□□ -0.78
LSM2-213ENST00000491421 WDHD1O75717 1129 aaPredicted RBP10.16□□□□□ -0.78
LSM2-213ENST00000491421 MCAMP43121 646 aa10.16□□□□□ -0.78
LSM2-213ENST00000491421 SOX10P56693 466 aa10.16□□□□□ -0.78
LSM2-213ENST00000491421 GSTO1P78417 241 aa10.16□□□□□ -0.78
LSM2-213ENST00000491421 PPATQ06203 517 aa10.16□□□□□ -0.78
LSM2-213ENST00000491421 PPIL2Q13356 520 aa10.16□□□□□ -0.78
LSM2-213ENST00000491421 TAF1CQ15572 869 aaPredicted RBP10.16□□□□□ -0.78
LSM2-213ENST00000491421 CCDC158Q5M9N0 1113 aa10.16□□□□□ -0.78
LSM2-213ENST00000491421 TTC39AQ5SRH9 613 aa10.16□□□□□ -0.78
LSM2-213ENST00000491421 FBXO46Q6PJ61 603 aaPredicted RBP10.16□□□□□ -0.78
LSM2-213ENST00000491421 TBC1D9Q6ZT07 1266 aa10.16□□□□□ -0.78
LSM2-213ENST00000491421 ZSCAN29Q8IWY8 852 aaPredicted RBP10.16□□□□□ -0.78
LSM2-213ENST00000491421 ZFPM1Q8IX07 1006 aa10.16□□□□□ -0.78
LSM2-213ENST00000491421 FAM43AQ8N2R8 423 aa10.16□□□□□ -0.78
LSM2-213ENST00000491421 PANK1Q8TE04 598 aa10.16□□□□□ -0.78
LSM2-213ENST00000491421 ERO1AQ96HE7 468 aa10.16□□□□□ -0.78
LSM2-213ENST00000491421 RAI14Q9P0K7 980 aa10.16□□□□□ -0.78
LSM2-213ENST00000491421 ZNF112Q9UJU3 913 aa10.16□□□□□ -0.78
LSM2-213ENST00000491421 TRIM17Q9Y577 477 aa10.16□□□□□ -0.78
LSM2-213ENST00000491421 RFX7Q2KHR2 1363 aa10.15□□□□□ -0.78
LSM2-213ENST00000491421 MYH13Q9UKX3 1938 aa10.15□□□□□ -0.78
LSM2-213ENST00000491421 GPR75-ASB3A0A0A6YYF3 556 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms