RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 C1orf115Q9H7X2 142 aa22.27■■□□□ 1.16
HMGN1-219ENST00000491183 IGF2BP3O00425 579 aaKnown RBP eCLIP22.26■■□□□ 1.15
HMGN1-219ENST00000491183 VGLL4Q14135 290 aa22.26■■□□□ 1.15
HMGN1-219ENST00000491183 MVPQ14764 893 aaKnown RBP22.26■■□□□ 1.15
HMGN1-219ENST00000491183 NOM1Q5C9Z4 860 aaKnown RBP22.26■■□□□ 1.15
HMGN1-219ENST00000491183 FTSJ3Q8IY81 847 aaKnown RBP22.26■■□□□ 1.15
HMGN1-219ENST00000491183 SSH3Q8TE77 659 aa22.26■■□□□ 1.15
HMGN1-219ENST00000491183 CNKSR2Q8WXI2 1034 aa22.26■■□□□ 1.15
HMGN1-219ENST00000491183 OPTNQ96CV9 577 aa22.26■■□□□ 1.15
HMGN1-219ENST00000491183 PDS5AQ29RF7 1337 aaKnown RBP22.26■■□□□ 1.15
HMGN1-219ENST00000491183 MYH2Q9UKX2 1941 aa22.25■■□□□ 1.15
HMGN1-219ENST00000491183 NFIAQ12857 509 aa22.25■■□□□ 1.15
HMGN1-219ENST00000491183 CTU1Q7Z7A3 348 aaKnown RBP22.25■■□□□ 1.15
HMGN1-219ENST00000491183 ITPRIPQ8IWB1 547 aa22.25■■□□□ 1.15
HMGN1-219ENST00000491183 FAM151AQ8WW52 585 aa22.25■■□□□ 1.15
HMGN1-219ENST00000491183 USP40Q9NVE5 1235 aa22.25■■□□□ 1.15
HMGN1-219ENST00000491183 TESPA1A2RU30 521 aaPredicted RBP22.24■■□□□ 1.15
HMGN1-219ENST00000491183 ALDH1A1P00352 501 aa22.24■■□□□ 1.15
HMGN1-219ENST00000491183 TCP10Q12799 353 aa22.24■■□□□ 1.15
HMGN1-219ENST00000491183 ZGPATQ8N5A5 531 aaKnown RBP22.24■■□□□ 1.15
HMGN1-219ENST00000491183 PTPN18Q99952 460 aa22.24■■□□□ 1.15
HMGN1-219ENST00000491183 HMG20BQ9P0W2 317 aa22.24■■□□□ 1.15
HMGN1-219ENST00000491183 ABCF2Q9UG63 623 aa22.24■■□□□ 1.15
HMGN1-219ENST00000491183 MS4A4AQ96JQ5 239 aa22.23■■□□□ 1.15
HMGN1-219ENST00000491183 FAM198AQ9UFP1 575 aa22.23■■□□□ 1.15
HMGN1-219ENST00000491183 GAKO14976 1311 aa22.23■■□□□ 1.15
HMGN1-219ENST00000491183 RPAP1Q9BWH6 1393 aaPredicted RBP22.23■■□□□ 1.15
HMGN1-219ENST00000491183 PI16Q6UXB8 463 aa22.22■■□□□ 1.15
HMGN1-219ENST00000491183 MIGA2Q7L4E1 593 aa22.22■■□□□ 1.15
HMGN1-219ENST00000491183 ZFPM1Q8IX07 1006 aa22.22■■□□□ 1.15
HMGN1-219ENST00000491183 PANK1Q8TE04 598 aa22.22■■□□□ 1.15
HMGN1-219ENST00000491183 CSADQ9Y600 493 aa22.22■■□□□ 1.15
HMGN1-219ENST00000491183 GORABQ5T7V8 394 aa22.21■■□□□ 1.15
HMGN1-219ENST00000491183 ZNF384Q8TF68 577 aa22.21■■□□□ 1.15
HMGN1-219ENST00000491183 ZKSCAN4Q969J2 545 aaPredicted RBP22.21■■□□□ 1.15
HMGN1-219ENST00000491183 HOOK2Q96ED9 719 aa22.21■■□□□ 1.15
HMGN1-219ENST00000491183 FAM163AQ96GL9 167 aaPredicted RBP22.21■■□□□ 1.15
HMGN1-219ENST00000491183 WRNIP1Q96S55 665 aa22.21■■□□□ 1.15
HMGN1-219ENST00000491183 SNCAIPQ9Y6H5 919 aa22.21■■□□□ 1.15
HMGN1-219ENST00000491183 AK9Q5TCS8 1911 aa22.21■■□□□ 1.15
HMGN1-219ENST00000491183 FKTNO75072 461 aa22.2■■□□□ 1.14
HMGN1-219ENST00000491183 SURF6O75683 361 aaKnown RBP22.2■■□□□ 1.14
HMGN1-219ENST00000491183 ARID4AP29374 1257 aaPredicted RBP22.2■■□□□ 1.14
HMGN1-219ENST00000491183 DCAF15Q66K64 600 aa22.2■■□□□ 1.14
HMGN1-219ENST00000491183 SPTY2D1Q68D10 685 aaPredicted RBP22.2■■□□□ 1.14
HMGN1-219ENST00000491183 TBC1D9Q6ZT07 1266 aa22.2■■□□□ 1.14
HMGN1-219ENST00000491183 DZIP1Q86YF9 867 aaKnown RBP22.2■■□□□ 1.14
HMGN1-219ENST00000491183 SPATA5Q8NB90 893 aa22.2■■□□□ 1.14
HMGN1-219ENST00000491183 GPR108Q9NPR9 543 aa22.2■■□□□ 1.14
HMGN1-219ENST00000491183 NOP58Q9Y2X3 529 aaKnown RBP22.2■■□□□ 1.14
HMGN1-219ENST00000491183 SPDYE5A6NIY4 337 aa22.19■■□□□ 1.14
HMGN1-219ENST00000491183 MECOMQ03112 1051 aa22.19■■□□□ 1.14
HMGN1-219ENST00000491183 TNNI3KQ59H18 835 aa22.19■■□□□ 1.14
HMGN1-219ENST00000491183 ERICH6Q7L0X2 663 aa22.19■■□□□ 1.14
HMGN1-219ENST00000491183 BRI3BPQ8WY22 251 aa22.19■■□□□ 1.14
HMGN1-219ENST00000491183 OTUD5Q96G74 571 aa22.19■■□□□ 1.14
HMGN1-219ENST00000491183 IDI2Q9BXS1 227 aa22.19■■□□□ 1.14
HMGN1-219ENST00000491183 ZNF341Q9BYN7 854 aa22.19■■□□□ 1.14
HMGN1-219ENST00000491183 FPGT-TNNI3KV9GXZ4 949 aa22.19■■□□□ 1.14
HMGN1-219ENST00000491183 MCAMP43121 646 aa22.18■■□□□ 1.14
HMGN1-219ENST00000491183 ZNF112Q9UJU3 913 aa22.18■■□□□ 1.14
HMGN1-219ENST00000491183 MROH7-TTC4A0A0A0MT08 1334 aa22.17■■□□□ 1.14
HMGN1-219ENST00000491183 INPP5BP32019 993 aa22.17■■□□□ 1.14
HMGN1-219ENST00000491183 RGS19P49795 217 aa22.17■■□□□ 1.14
HMGN1-219ENST00000491183 RGS3P49796 1198 aa22.17■■□□□ 1.14
HMGN1-219ENST00000491183 GTF2A2P52657 109 aa22.17■■□□□ 1.14
HMGN1-219ENST00000491183 CRHR2Q13324 411 aa22.17■■□□□ 1.14
HMGN1-219ENST00000491183 OS9Q13438 667 aaPredicted RBP22.17■■□□□ 1.14
HMGN1-219ENST00000491183 OTUD7BQ6GQQ9 843 aa22.17■■□□□ 1.14
HMGN1-219ENST00000491183 CEP85Q6P2H3 762 aa22.17■■□□□ 1.14
HMGN1-219ENST00000491183 ERO1BQ86YB8 467 aa22.17■■□□□ 1.14
HMGN1-219ENST00000491183 SLF2Q8IX21 1173 aa22.17■■□□□ 1.14
HMGN1-219ENST00000491183 DBNDD2Q9BQY9 259 aa22.17■■□□□ 1.14
HMGN1-219ENST00000491183 RFX7Q2KHR2 1363 aa22.16■■□□□ 1.14
HMGN1-219ENST00000491183 GPR75-ASB3A0A0A6YYF3 556 aa22.16■■□□□ 1.14
HMGN1-219ENST00000491183 CCL15-CCL14A0A0B4J2E2 113 aa22.16■■□□□ 1.14
HMGN1-219ENST00000491183 ENTPD3O75355 529 aa22.16■■□□□ 1.14
HMGN1-219ENST00000491183 WDHD1O75717 1129 aaPredicted RBP22.16■■□□□ 1.14
HMGN1-219ENST00000491183 UQCRFS1P1P0C7P4 283 aa22.16■■□□□ 1.14
HMGN1-219ENST00000491183 BTDP43251 543 aa22.16■■□□□ 1.14
HMGN1-219ENST00000491183 PKN2Q16513 984 aaKnown RBP22.16■■□□□ 1.14
HMGN1-219ENST00000491183 CCL15Q16663 113 aa22.16■■□□□ 1.14
HMGN1-219ENST00000491183 SH3BP5LQ7L8J4 393 aa22.16■■□□□ 1.14
HMGN1-219ENST00000491183 NSUN4Q96CB9 384 aaKnown RBP22.16■■□□□ 1.14
HMGN1-219ENST00000491183 RHBDL3P58872 404 aa22.15■■□□□ 1.14
HMGN1-219ENST00000491183 DDX4Q9NQI0 724 aaKnown RBP22.15■■□□□ 1.14
HMGN1-219ENST00000491183 IRF6O14896 467 aa22.14■■□□□ 1.13
HMGN1-219ENST00000491183 FAM43AQ8N2R8 423 aa22.14■■□□□ 1.13
HMGN1-219ENST00000491183 SNRKQ9NRH2 765 aa22.14■■□□□ 1.13
HMGN1-219ENST00000491183 HPS5Q9UPZ3 1129 aa22.14■■□□□ 1.13
HMGN1-219ENST00000491183 ATRNL1Q5VV63 1379 aa22.13■■□□□ 1.13
HMGN1-219ENST00000491183 DDTLA6NHG4 134 aaPredicted RBP22.13■■□□□ 1.13
HMGN1-219ENST00000491183 PPIL2Q13356 520 aa22.13■■□□□ 1.13
HMGN1-219ENST00000491183 TTC39AQ5SRH9 613 aa22.13■■□□□ 1.13
HMGN1-219ENST00000491183 LDHCP07864 332 aa22.12■■□□□ 1.13
HMGN1-219ENST00000491183 SLURP2P0DP57 97 aa22.12■■□□□ 1.13
HMGN1-219ENST00000491183 PPATQ06203 517 aa22.12■■□□□ 1.13
HMGN1-219ENST00000491183 CCDC158Q5M9N0 1113 aa22.12■■□□□ 1.13
HMGN1-219ENST00000491183 EAF2Q96CJ1 260 aaPredicted RBP22.12■■□□□ 1.13
HMGN1-219ENST00000491183 CCDC8Q9H0W5 538 aaPredicted RBP22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms