RNA–Protein interactions for RNA: ENST00000491062.5

FXR1-220, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2 BASIC

Gene FXR1, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-220ENST00000491062 LINC00301Q8NCQ3 95 aa14.28□□□□□ -0.12
FXR1-220ENST00000491062 OSBP2Q969R2 916 aa14.28□□□□□ -0.12
FXR1-220ENST00000491062 IMPACTQ9P2X3 320 aa14.28□□□□□ -0.12
FXR1-220ENST00000491062 ECM29Q5VYK3 1845 aa14.28□□□□□ -0.12
FXR1-220ENST00000491062 CCDC69A6NI79 296 aa14.27□□□□□ -0.12
FXR1-220ENST00000491062 MB21D2Q8IYB1 491 aaPredicted RBP14.27□□□□□ -0.12
FXR1-220ENST00000491062 AOPEPQ8N6M6 819 aa14.27□□□□□ -0.12
FXR1-220ENST00000491062 CGNQ9P2M7 1197 aaKnown RBP14.27□□□□□ -0.12
FXR1-220ENST00000491062 CCDC9Q9Y3X0 531 aaKnown RBP14.27□□□□□ -0.12
FXR1-220ENST00000491062 PCDH11XQ9BZA7 1347 aa14.27□□□□□ -0.13
FXR1-220ENST00000491062 PCDH11YQ9BZA8 1340 aa14.27□□□□□ -0.13
FXR1-220ENST00000491062 DHX16O60231 1041 aaKnown RBP14.27□□□□□ -0.13
FXR1-220ENST00000491062 SKILP12757 684 aa14.27□□□□□ -0.13
FXR1-220ENST00000491062 GUCY1B3Q02153 619 aa14.27□□□□□ -0.13
FXR1-220ENST00000491062 IMMTQ16891 758 aaKnown RBP14.27□□□□□ -0.13
FXR1-220ENST00000491062 GTPBP4Q9BZE4 634 aaKnown RBP14.27□□□□□ -0.13
FXR1-220ENST00000491062 ATRNO75882 1429 aa14.26□□□□□ -0.13
FXR1-220ENST00000491062 KIF2AO00139 706 aaPredicted RBP14.26□□□□□ -0.13
FXR1-220ENST00000491062 KCNJ6P48051 423 aa14.26□□□□□ -0.13
FXR1-220ENST00000491062 DHX8Q14562 1220 aaKnown RBP14.26□□□□□ -0.13
FXR1-220ENST00000491062 ARID5BQ14865 1188 aa14.26□□□□□ -0.13
FXR1-220ENST00000491062 TTLL5Q6EMB2 1281 aa14.26□□□□□ -0.13
FXR1-220ENST00000491062 C8orf76Q96K31 380 aa14.26□□□□□ -0.13
FXR1-220ENST00000491062 CEP126Q9P2H0 1117 aa14.26□□□□□ -0.13
FXR1-220ENST00000491062 HPS5Q9UPZ3 1129 aa14.26□□□□□ -0.13
FXR1-220ENST00000491062 STRCP1A6NGW2 1772 aa14.26□□□□□ -0.13
FXR1-220ENST00000491062 ERVV-2B6SEH9 535 aa14.25□□□□□ -0.13
FXR1-220ENST00000491062 CBX1P83916 185 aa14.25□□□□□ -0.13
FXR1-220ENST00000491062 STK38Q15208 465 aa14.25□□□□□ -0.13
FXR1-220ENST00000491062 MYSM1Q5VVJ2 828 aa14.25□□□□□ -0.13
FXR1-220ENST00000491062 NBPF11Q86T75 865 aa14.25□□□□□ -0.13
FXR1-220ENST00000491062 CCAR2Q8N163 923 aaKnown RBP14.25□□□□□ -0.13
FXR1-220ENST00000491062 FBXO18Q8NFZ0 1043 aa14.25□□□□□ -0.13
FXR1-220ENST00000491062 APPBP2Q92624 585 aa14.25□□□□□ -0.13
FXR1-220ENST00000491062 ZNF594Q96JF6 807 aaPredicted RBP14.25□□□□□ -0.13
FXR1-220ENST00000491062 ISCA1Q9BUE6 129 aa14.25□□□□□ -0.13
FXR1-220ENST00000491062 PRDM10Q9NQV6 1147 aa14.25□□□□□ -0.13
FXR1-220ENST00000491062 KIAA1468Q9P260 1216 aa14.25□□□□□ -0.13
FXR1-220ENST00000491062 NAP1L2Q9ULW6 460 aaPredicted RBP14.25□□□□□ -0.13
FXR1-220ENST00000491062 AKAP2Q9Y2D5 859 aa14.25□□□□□ -0.13
FXR1-220ENST00000491062 USP27XA6NNY8 438 aa14.24□□□□□ -0.13
FXR1-220ENST00000491062 GOLGA8BA8MQT2 603 aa14.24□□□□□ -0.13
FXR1-220ENST00000491062 PRC1O43663 620 aa14.24□□□□□ -0.13
FXR1-220ENST00000491062 U2AF2P26368 475 aaKnown RBP eCLIP14.24□□□□□ -0.131e-6■■■□□ 14.6
FXR1-220ENST00000491062 NDUFA8P51970 172 aa14.24□□□□□ -0.13
FXR1-220ENST00000491062 PTPN14Q15678 1187 aa14.24□□□□□ -0.13
FXR1-220ENST00000491062 TTC39AQ5SRH9 613 aa14.24□□□□□ -0.13
FXR1-220ENST00000491062 CHST3Q7LGC8 479 aa14.24□□□□□ -0.13
FXR1-220ENST00000491062 CCDC150Q8NCX0 1101 aa14.24□□□□□ -0.13
FXR1-220ENST00000491062 LHX6Q9UPM6 363 aa14.24□□□□□ -0.13
FXR1-220ENST00000491062 PCDHGA10Q9Y5H3 936 aa14.24□□□□□ -0.13
FXR1-220ENST00000491062 CLIC4Q9Y696 253 aa14.24□□□□□ -0.13
FXR1-220ENST00000491062 RIC1Q4ADV7 1423 aa14.24□□□□□ -0.13
FXR1-220ENST00000491062 AKAP11Q9UKA4 1901 aa14.24□□□□□ -0.13
FXR1-220ENST00000491062 TOGARAM1Q9Y4F4 1720 aa14.24□□□□□ -0.13
FXR1-220ENST00000491062 KLF18A0A0U1RQI7 1052 aa14.24□□□□□ -0.13
FXR1-220ENST00000491062 SPTLC2O15270 562 aa14.24□□□□□ -0.13
FXR1-220ENST00000491062 ANTXR2P58335 489 aa14.24□□□□□ -0.13
FXR1-220ENST00000491062 CHRNA2Q15822 529 aa14.24□□□□□ -0.13
FXR1-220ENST00000491062 CCDC158Q5M9N0 1113 aa14.24□□□□□ -0.13
FXR1-220ENST00000491062 SDF4Q9BRK5 362 aa14.24□□□□□ -0.13
FXR1-220ENST00000491062 PLA2G12BQ9BX93 195 aa14.24□□□□□ -0.13
FXR1-220ENST00000491062 PUS3Q9BZE2 481 aaKnown RBP14.24□□□□□ -0.13
FXR1-220ENST00000491062 OGFRQ9NZT2 677 aa14.24□□□□□ -0.13
FXR1-220ENST00000491062 ORC3Q9UBD5 711 aaPredicted RBP14.24□□□□□ -0.13
FXR1-220ENST00000491062 SPATA31A3Q5VYP0 1347 aa14.23□□□□□ -0.13
FXR1-220ENST00000491062 A0A087WWV3 80 aa14.23□□□□□ -0.13
FXR1-220ENST00000491062 A0A1B0GVL5 298 aa14.23□□□□□ -0.13
FXR1-220ENST00000491062 ATF3P18847 181 aa14.23□□□□□ -0.13
FXR1-220ENST00000491062 NLRP12P59046 1061 aa14.23□□□□□ -0.13
FXR1-220ENST00000491062 KIF23Q02241 960 aaPredicted RBP14.23□□□□□ -0.13
FXR1-220ENST00000491062 DPCR1Q3MIW9 517 aa14.23□□□□□ -0.13
FXR1-220ENST00000491062 FILIP1Q7Z7B0 1213 aa14.23□□□□□ -0.13
FXR1-220ENST00000491062 GPIHBP1Q8IV16 184 aa14.23□□□□□ -0.13
FXR1-220ENST00000491062 ZNF454Q8N9F8 522 aa14.23□□□□□ -0.13
FXR1-220ENST00000491062 NCOA7Q8NI08 942 aa14.23□□□□□ -0.13
FXR1-220ENST00000491062 ZC3H15Q8WU90 426 aaKnown RBP14.23□□□□□ -0.13
FXR1-220ENST00000491062 XAGE2Q96GT9 111 aa14.23□□□□□ -0.13
FXR1-220ENST00000491062 FGAP02671 866 aa14.22□□□□□ -0.13
FXR1-220ENST00000491062 A1BGP04217 495 aa14.22□□□□□ -0.13
FXR1-220ENST00000491062 HOXB1P14653 301 aaPredicted RBP14.22□□□□□ -0.13
FXR1-220ENST00000491062 CMA1P23946 247 aa14.22□□□□□ -0.13
FXR1-220ENST00000491062 ADORA1P30542 326 aa14.22□□□□□ -0.13
FXR1-220ENST00000491062 TRIM28Q13263 835 aaKnown RBP14.22□□□□□ -0.13
FXR1-220ENST00000491062 SF3A1Q15459 793 aaKnown RBP14.22□□□□□ -0.13
FXR1-220ENST00000491062 AXDND1Q5T1B0 1012 aaPredicted RBP14.22□□□□□ -0.13
FXR1-220ENST00000491062 TIGD1Q96MW7 591 aa14.22□□□□□ -0.13
FXR1-220ENST00000491062 ZBTB3Q9H5J0 574 aa14.22□□□□□ -0.13
FXR1-220ENST00000491062 ARAP2Q8WZ64 1704 aa14.22□□□□□ -0.13
FXR1-220ENST00000491062 ZMYM6O95789 1325 aa14.22□□□□□ -0.13
FXR1-220ENST00000491062 TPM4P67936 248 aa14.22□□□□□ -0.13
FXR1-220ENST00000491062 FKBP4Q02790 459 aaKnown RBP eCLIP14.22□□□□□ -0.13
FXR1-220ENST00000491062 CCDC57Q2TAC2 916 aa14.22□□□□□ -0.13
FXR1-220ENST00000491062 ANO1Q5XXA6 986 aa14.22□□□□□ -0.13
FXR1-220ENST00000491062 ERO1AQ96HE7 468 aa14.22□□□□□ -0.13
FXR1-220ENST00000491062 ANKRD36CQ5JPF3 1778 aa14.21□□□□□ -0.13
FXR1-220ENST00000491062 WDR17Q8IZU2 1322 aa14.21□□□□□ -0.13
FXR1-220ENST00000491062 LRP5O75197 1615 aa14.21□□□□□ -0.13
FXR1-220ENST00000491062 FAM237AA0A1B0GTK4 181 aa14.21□□□□□ -0.13
FXR1-220ENST00000491062 PSDA5PKW4 1024 aaPredicted RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms