RNA–Protein interactions for RNA: ENST00000490447.6

YIPF3-208, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-208ENST00000490447 ZNF341Q9BYN7 854 aa22.14■■□□□ 1.14
YIPF3-208ENST00000490447 LDHBP07195 334 aaKnown RBP22.13■■□□□ 1.13
YIPF3-208ENST00000490447 FAM151AQ8WW52 585 aa22.13■■□□□ 1.13
YIPF3-208ENST00000490447 IRF6O14896 467 aa22.12■■□□□ 1.13
YIPF3-208ENST00000490447 IL15P40933 162 aaPredicted RBP22.12■■□□□ 1.13
YIPF3-208ENST00000490447 PPIL2Q13356 520 aa22.12■■□□□ 1.13
YIPF3-208ENST00000490447 DIXDC1Q155Q3 683 aa22.12■■□□□ 1.13
YIPF3-208ENST00000490447 MIGA2Q7L4E1 593 aa22.12■■□□□ 1.13
YIPF3-208ENST00000490447 ZCCHC17Q9NP64 241 aaKnown RBP22.12■■□□□ 1.13
YIPF3-208ENST00000490447 DAGLAQ9Y4D2 1042 aa22.12■■□□□ 1.13
YIPF3-208ENST00000490447 BRCA2P51587 3418 aa22.12■■□□□ 1.13
YIPF3-208ENST00000490447 POTEFA5A3E0 1075 aa22.11■■□□□ 1.13
YIPF3-208ENST00000490447 PRDX5P30044 214 aa22.11■■□□□ 1.13
YIPF3-208ENST00000490447 TCP10Q12799 353 aa22.11■■□□□ 1.13
YIPF3-208ENST00000490447 KIF22Q14807 665 aa22.11■■□□□ 1.13
YIPF3-208ENST00000490447 TRMT2AQ8IZ69 625 aaKnown RBP22.11■■□□□ 1.13
YIPF3-208ENST00000490447 ARMC5Q96C12 935 aa22.11■■□□□ 1.13
YIPF3-208ENST00000490447 DENND2AQ9ULE3 1009 aa22.11■■□□□ 1.13
YIPF3-208ENST00000490447 LRRFIP2Q9Y608 721 aaKnown RBP22.11■■□□□ 1.13
YIPF3-208ENST00000490447 MKI67P46013 3256 aaKnown RBP22.11■■□□□ 1.13
YIPF3-208ENST00000490447 MYH13Q9UKX3 1938 aa22.11■■□□□ 1.13
YIPF3-208ENST00000490447 SEMA3EO15041 775 aa22.1■■□□□ 1.13
YIPF3-208ENST00000490447 PPATQ06203 517 aa22.1■■□□□ 1.13
YIPF3-208ENST00000490447 CDC42EP5Q6NZY7 148 aa22.1■■□□□ 1.13
YIPF3-208ENST00000490447 NBPF11Q86T75 865 aa22.1■■□□□ 1.13
YIPF3-208ENST00000490447 BTBD19C9JJ37 291 aa22.09■■□□□ 1.13
YIPF3-208ENST00000490447 TLR2O60603 784 aa22.09■■□□□ 1.13
YIPF3-208ENST00000490447 SLC9C1Q4G0N8 1177 aa22.09■■□□□ 1.13
YIPF3-208ENST00000490447 ZGPATQ8N5A5 531 aaKnown RBP22.09■■□□□ 1.13
YIPF3-208ENST00000490447 TMEM106CQ9BVX2 250 aa22.09■■□□□ 1.13
YIPF3-208ENST00000490447 INPP5BP32019 993 aa22.08■■□□□ 1.13
YIPF3-208ENST00000490447 SALL1Q9NSC2 1324 aa22.08■■□□□ 1.13
YIPF3-208ENST00000490447 USP40Q9NVE5 1235 aa22.08■■□□□ 1.13
YIPF3-208ENST00000490447 PA2G4Q9UQ80 394 aaKnown RBP22.08■■□□□ 1.13
YIPF3-208ENST00000490447 PHKA1P46020 1223 aa22.07■■□□□ 1.12
YIPF3-208ENST00000490447 CAP1Q01518 475 aa22.07■■□□□ 1.12
YIPF3-208ENST00000490447 NFIAQ12857 509 aa22.07■■□□□ 1.12
YIPF3-208ENST00000490447 PTCH2Q9Y6C5 1203 aa22.07■■□□□ 1.12
YIPF3-208ENST00000490447 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.06■■□□□ 1.12
YIPF3-208ENST00000490447 ZNF333Q96JL9 665 aa22.06■■□□□ 1.12
YIPF3-208ENST00000490447 MEIS3Q99687 375 aa22.06■■□□□ 1.12
YIPF3-208ENST00000490447 COPRSQ9NQ92 184 aa22.06■■□□□ 1.12
YIPF3-208ENST00000490447 LACTBP83111 547 aaPredicted RBP22.06■■□□□ 1.12
YIPF3-208ENST00000490447 CCDC102BQ68D86 513 aa22.06■■□□□ 1.12
YIPF3-208ENST00000490447 DZIP1Q86YF9 867 aaKnown RBP22.06■■□□□ 1.12
YIPF3-208ENST00000490447 GNRH1P01148 92 aa22.05■■□□□ 1.12
YIPF3-208ENST00000490447 GNAI3P08754 354 aa22.05■■□□□ 1.12
YIPF3-208ENST00000490447 SLF2Q8IX21 1173 aa22.05■■□□□ 1.12
YIPF3-208ENST00000490447 GCC1Q96CN9 775 aa22.05■■□□□ 1.12
YIPF3-208ENST00000490447 FAM198AQ9UFP1 575 aa22.05■■□□□ 1.12
YIPF3-208ENST00000490447 ZNF112Q9UJU3 913 aa22.05■■□□□ 1.12
YIPF3-208ENST00000490447 ADORA1P30542 326 aa22.04■■□□□ 1.12
YIPF3-208ENST00000490447 RARSP54136 660 aaKnown RBP22.04■■□□□ 1.12
YIPF3-208ENST00000490447 SLC4A8Q2Y0W8 1093 aa22.04■■□□□ 1.12
YIPF3-208ENST00000490447 ANKRD23Q86SG2 305 aa22.04■■□□□ 1.12
YIPF3-208ENST00000490447 ARHGAP45Q92619 1136 aa22.04■■□□□ 1.12
YIPF3-208ENST00000490447 ABCF2Q9UG63 623 aa22.04■■□□□ 1.12
YIPF3-208ENST00000490447 AKAP2Q9Y2D5 859 aa22.04■■□□□ 1.12
YIPF3-208ENST00000490447 PDHXO00330 501 aa22.03■■□□□ 1.12
YIPF3-208ENST00000490447 SRGAP3O43295 1099 aa22.03■■□□□ 1.12
YIPF3-208ENST00000490447 EN2P19622 333 aaPredicted RBP22.03■■□□□ 1.12
YIPF3-208ENST00000490447 NOL9Q5SY16 702 aaKnown RBP22.03■■□□□ 1.12
YIPF3-208ENST00000490447 SPTY2D1Q68D10 685 aaPredicted RBP22.03■■□□□ 1.12
YIPF3-208ENST00000490447 ARHGAP39Q9C0H5 1083 aa22.03■■□□□ 1.12
YIPF3-208ENST00000490447 KCNH4Q9UQ05 1017 aa22.03■■□□□ 1.12
YIPF3-208ENST00000490447 A0A1B0GUL7 405 aa22.02■■□□□ 1.12
YIPF3-208ENST00000490447 ZBTB22O15209 634 aa22.02■■□□□ 1.12
YIPF3-208ENST00000490447 RGS3P49796 1198 aa22.02■■□□□ 1.12
YIPF3-208ENST00000490447 PRMT2P55345 433 aa22.02■■□□□ 1.12
YIPF3-208ENST00000490447 TIMM10P62072 90 aa22.02■■□□□ 1.12
YIPF3-208ENST00000490447 RASGRF1Q13972 1273 aa22.02■■□□□ 1.12
YIPF3-208ENST00000490447 MVPQ14764 893 aaKnown RBP22.02■■□□□ 1.12
YIPF3-208ENST00000490447 ZSCAN29Q8IWY8 852 aaPredicted RBP22.02■■□□□ 1.12
YIPF3-208ENST00000490447 PCDH10Q9P2E7 1040 aa22.02■■□□□ 1.12
YIPF3-208ENST00000490447 CPA4Q9UI42 421 aa22.02■■□□□ 1.12
YIPF3-208ENST00000490447 RBBP6Q7Z6E9 1792 aaKnown RBP22.01■■□□□ 1.11
YIPF3-208ENST00000490447 PDS5AQ29RF7 1337 aaKnown RBP22.01■■□□□ 1.11
YIPF3-208ENST00000490447 CCER2I3L3R5 266 aa22.01■■□□□ 1.11
YIPF3-208ENST00000490447 ENTPD3O75355 529 aa22.01■■□□□ 1.11
YIPF3-208ENST00000490447 ECM2O94769 699 aaPredicted RBP22.01■■□□□ 1.11
YIPF3-208ENST00000490447 C17orf99Q6UX52 265 aa22.01■■□□□ 1.11
YIPF3-208ENST00000490447 IDI2Q9BXS1 227 aa22.01■■□□□ 1.11
YIPF3-208ENST00000490447 PICK1Q9NRD5 415 aa22.01■■□□□ 1.11
YIPF3-208ENST00000490447 AK9Q5TCS8 1911 aa22■■□□□ 1.11
YIPF3-208ENST00000490447 GAKO14976 1311 aa22■■□□□ 1.11
YIPF3-208ENST00000490447 MYCP01106 439 aaPredicted RBP22■■□□□ 1.11
YIPF3-208ENST00000490447 TFCP2Q12800 502 aa22■■□□□ 1.11
YIPF3-208ENST00000490447 ZFPM1Q8IX07 1006 aa22■■□□□ 1.11
YIPF3-208ENST00000490447 SH3TC2Q8TF17 1288 aa22■■□□□ 1.11
YIPF3-208ENST00000490447 PARK7Q99497 189 aaKnown RBP22■■□□□ 1.11
YIPF3-208ENST00000490447 IPO8O15397 1037 aaKnown RBP21.99■■□□□ 1.11
YIPF3-208ENST00000490447 HOXD10P28358 340 aa21.99■■□□□ 1.11
YIPF3-208ENST00000490447 PICALMQ13492 652 aa21.99■■□□□ 1.11
YIPF3-208ENST00000490447 XAGE2Q96GT9 111 aa21.99■■□□□ 1.11
YIPF3-208ENST00000490447 NEUROD6Q96NK8 337 aa21.99■■□□□ 1.11
YIPF3-208ENST00000490447 CXCL11O14625 94 aa21.98■■□□□ 1.11
YIPF3-208ENST00000490447 BTDP43251 543 aa21.98■■□□□ 1.11
YIPF3-208ENST00000490447 PSMC4P43686 418 aa21.98■■□□□ 1.11
YIPF3-208ENST00000490447 MTX1Q13505 466 aa21.98■■□□□ 1.11
YIPF3-208ENST00000490447 GORABQ5T7V8 394 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms