RNA–Protein interactions for RNA: ENST00000489453.1

CHKB-211, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 722 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-211ENST00000489453 E9PSI1 815 aa12.98□□□□□ -0.33
CHKB-211ENST00000489453 TLR2O60603 784 aa12.98□□□□□ -0.33
CHKB-211ENST00000489453 MYCP01106 439 aaPredicted RBP12.98□□□□□ -0.33
CHKB-211ENST00000489453 APOBEC3HQ6NTF7 200 aaKnown RBP12.98□□□□□ -0.33
CHKB-211ENST00000489453 LPIN2Q92539 896 aa12.98□□□□□ -0.33
CHKB-211ENST00000489453 GNL3LQ9NVN8 582 aaKnown RBP12.98□□□□□ -0.33
CHKB-211ENST00000489453 EYA2O00167 538 aa12.97□□□□□ -0.33
CHKB-211ENST00000489453 IRF6O14896 467 aa12.97□□□□□ -0.33
CHKB-211ENST00000489453 ECM2O94769 699 aaPredicted RBP12.97□□□□□ -0.33
CHKB-211ENST00000489453 GNRH1P01148 92 aa12.97□□□□□ -0.33
CHKB-211ENST00000489453 LACTBP83111 547 aaPredicted RBP12.97□□□□□ -0.33
CHKB-211ENST00000489453 CAP1Q01518 475 aa12.97□□□□□ -0.33
CHKB-211ENST00000489453 PPATQ06203 517 aa12.97□□□□□ -0.33
CHKB-211ENST00000489453 HABP4Q5JVS0 413 aaKnown RBP12.97□□□□□ -0.33
CHKB-211ENST00000489453 MIGA2Q7L4E1 593 aa12.97□□□□□ -0.33
CHKB-211ENST00000489453 FAM151AQ8WW52 585 aa12.97□□□□□ -0.33
CHKB-211ENST00000489453 SSH1Q8WYL5 1049 aa12.97□□□□□ -0.33
CHKB-211ENST00000489453 BRCA2P51587 3418 aa12.96□□□□□ -0.33
CHKB-211ENST00000489453 LDHBP07195 334 aaKnown RBP12.96□□□□□ -0.33
CHKB-211ENST00000489453 FGFR2P21802 821 aa12.96□□□□□ -0.33
CHKB-211ENST00000489453 PRMT2P55345 433 aa12.96□□□□□ -0.33
CHKB-211ENST00000489453 TCP10Q12799 353 aa12.96□□□□□ -0.33
CHKB-211ENST00000489453 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.96□□□□□ -0.33
CHKB-211ENST00000489453 SH3TC2Q8TF17 1288 aa12.96□□□□□ -0.33
CHKB-211ENST00000489453 USP44Q9H0E7 712 aa12.96□□□□□ -0.33
CHKB-211ENST00000489453 SIL1Q9H173 461 aa12.96□□□□□ -0.33
CHKB-211ENST00000489453 SMC4Q9NTJ3 1288 aa12.96□□□□□ -0.33
CHKB-211ENST00000489453 ZNF521Q96K83 1311 aa12.95□□□□□ -0.34
CHKB-211ENST00000489453 UBTFL1P0CB47 393 aaPredicted RBP12.95□□□□□ -0.34
CHKB-211ENST00000489453 HOXD10P28358 340 aa12.95□□□□□ -0.34
CHKB-211ENST00000489453 INPP5BP32019 993 aa12.95□□□□□ -0.34
CHKB-211ENST00000489453 ATP2B3Q16720 1220 aa12.95□□□□□ -0.34
CHKB-211ENST00000489453 ANKRD23Q86SG2 305 aa12.95□□□□□ -0.34
CHKB-211ENST00000489453 ARHGAP39Q9C0H5 1083 aa12.95□□□□□ -0.34
CHKB-211ENST00000489453 CEP126Q9P2H0 1117 aa12.95□□□□□ -0.34
CHKB-211ENST00000489453 CPA4Q9UI42 421 aa12.95□□□□□ -0.34
CHKB-211ENST00000489453 DAGLAQ9Y4D2 1042 aa12.95□□□□□ -0.34
CHKB-211ENST00000489453 DOCK1Q14185 1865 aa12.95□□□□□ -0.34
CHKB-211ENST00000489453 PTPRFP10586 1907 aa12.94□□□□□ -0.34
CHKB-211ENST00000489453 FMNL1O95466 1100 aaPredicted RBP12.94□□□□□ -0.34
CHKB-211ENST00000489453 DIXDC1Q155Q3 683 aa12.94□□□□□ -0.34
CHKB-211ENST00000489453 CDC42EP5Q6NZY7 148 aa12.94□□□□□ -0.34
CHKB-211ENST00000489453 RAET1EQ8TD07 263 aa12.94□□□□□ -0.34
CHKB-211ENST00000489453 USP40Q9NVE5 1235 aa12.94□□□□□ -0.34
CHKB-211ENST00000489453 HDAC5Q9UQL6 1122 aa12.94□□□□□ -0.34
CHKB-211ENST00000489453 CEP290O15078 2479 aa12.94□□□□□ -0.34
CHKB-211ENST00000489453 PDHXO00330 501 aa12.93□□□□□ -0.34
CHKB-211ENST00000489453 CIAO1O76071 339 aa12.93□□□□□ -0.34
CHKB-211ENST00000489453 PSMC4P43686 418 aa12.93□□□□□ -0.34
CHKB-211ENST00000489453 RFX5P48382 616 aaPredicted RBP12.93□□□□□ -0.34
CHKB-211ENST00000489453 ALDH1L2Q3SY69 923 aa12.93□□□□□ -0.34
CHKB-211ENST00000489453 ZGPATQ8N5A5 531 aaKnown RBP12.93□□□□□ -0.34
CHKB-211ENST00000489453 PARK7Q99497 189 aaKnown RBP12.93□□□□□ -0.34
CHKB-211ENST00000489453 BIN2Q9UBW5 565 aaPredicted RBP12.93□□□□□ -0.34
CHKB-211ENST00000489453 DENND2AQ9ULE3 1009 aa12.93□□□□□ -0.34
CHKB-211ENST00000489453 SEMA3EO15041 775 aa12.92□□□□□ -0.34
CHKB-211ENST00000489453 PRDX5P30044 214 aa12.92□□□□□ -0.34
CHKB-211ENST00000489453 C17orf99Q6UX52 265 aa12.92□□□□□ -0.34
CHKB-211ENST00000489453 ATG9AQ7Z3C6 839 aa12.92□□□□□ -0.34
CHKB-211ENST00000489453 DZIP1Q86YF9 867 aaKnown RBP12.92□□□□□ -0.34
CHKB-211ENST00000489453 ZSCAN29Q8IWY8 852 aaPredicted RBP12.92□□□□□ -0.34
CHKB-211ENST00000489453 PICK1Q9NRD5 415 aa12.92□□□□□ -0.34
CHKB-211ENST00000489453 ZNF112Q9UJU3 913 aa12.92□□□□□ -0.34
CHKB-211ENST00000489453 FBXO3Q9UK99 471 aa12.92□□□□□ -0.34
CHKB-211ENST00000489453 KCNH4Q9UQ05 1017 aa12.92□□□□□ -0.34
CHKB-211ENST00000489453 ATAD5Q96QE3 1844 aa12.92□□□□□ -0.34
CHKB-211ENST00000489453 MYPNQ86TC9 1320 aa12.91□□□□□ -0.34
CHKB-211ENST00000489453 IL15P40933 162 aaPredicted RBP12.91□□□□□ -0.34
CHKB-211ENST00000489453 SLFN5Q08AF3 891 aa12.91□□□□□ -0.34
CHKB-211ENST00000489453 NFIAQ12857 509 aa12.91□□□□□ -0.34
CHKB-211ENST00000489453 NOL9Q5SY16 702 aaKnown RBP12.91□□□□□ -0.34
CHKB-211ENST00000489453 SLF2Q8IX21 1173 aa12.91□□□□□ -0.34
CHKB-211ENST00000489453 TRIM47Q96LD4 638 aa12.91□□□□□ -0.34
CHKB-211ENST00000489453 SRRDQ9UH36 339 aa12.91□□□□□ -0.34
CHKB-211ENST00000489453 SALL1Q9NSC2 1324 aa12.9□□□□□ -0.34
CHKB-211ENST00000489453 PHIPQ8WWQ0 1821 aa12.9□□□□□ -0.34
CHKB-211ENST00000489453 CXCL11O14625 94 aa12.9□□□□□ -0.34
CHKB-211ENST00000489453 OSBPP22059 807 aa12.9□□□□□ -0.34
CHKB-211ENST00000489453 GRK4P32298 578 aa12.9□□□□□ -0.34
CHKB-211ENST00000489453 PHKA1P46020 1223 aa12.9□□□□□ -0.34
CHKB-211ENST00000489453 FCGRTP55899 365 aa12.9□□□□□ -0.34
CHKB-211ENST00000489453 UBXN2AP68543 259 aa12.9□□□□□ -0.34
CHKB-211ENST00000489453 GADL1Q6ZQY3 521 aa12.9□□□□□ -0.34
CHKB-211ENST00000489453 FASTKD5Q7L8L6 764 aaKnown RBP12.9□□□□□ -0.34
CHKB-211ENST00000489453 NKX2-3Q8TAU0 364 aa12.9□□□□□ -0.34
CHKB-211ENST00000489453 API5Q9BZZ5 524 aaKnown RBP12.9□□□□□ -0.34
CHKB-211ENST00000489453 FAM198AQ9UFP1 575 aa12.9□□□□□ -0.34
CHKB-211ENST00000489453 ABCF2Q9UG63 623 aa12.9□□□□□ -0.34
CHKB-211ENST00000489453 LRRFIP2Q9Y608 721 aaKnown RBP12.9□□□□□ -0.34
CHKB-211ENST00000489453 RGS3P49796 1198 aa12.89□□□□□ -0.35
CHKB-211ENST00000489453 SPTY2D1Q68D10 685 aaPredicted RBP12.89□□□□□ -0.35
CHKB-211ENST00000489453 SCYL3Q8IZE3 742 aa12.89□□□□□ -0.35
CHKB-211ENST00000489453 DPF3Q92784 378 aa12.89□□□□□ -0.35
CHKB-211ENST00000489453 ZHX2Q9Y6X8 837 aa12.89□□□□□ -0.35
CHKB-211ENST00000489453 DOCK3Q8IZD9 2030 aa12.89□□□□□ -0.35
CHKB-211ENST00000489453 ADGRA2Q96PE1 1338 aa12.88□□□□□ -0.35
CHKB-211ENST00000489453 H0YGN5 161 aa12.88□□□□□ -0.35
CHKB-211ENST00000489453 ENTPD3O75355 529 aa12.88□□□□□ -0.35
CHKB-211ENST00000489453 PICALMQ13492 652 aa12.88□□□□□ -0.35
CHKB-211ENST00000489453 MTFR1Q15390 333 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms