RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 APOBEC3HQ6NTF7 200 aaKnown RBP11.7□□□□□ -0.54
SNX17-207ENST00000489402 NBPF11Q86T75 865 aa11.7□□□□□ -0.54
SNX17-207ENST00000489402 FAM43AQ8N2R8 423 aa11.7□□□□□ -0.54
SNX17-207ENST00000489402 LPIN2Q92539 896 aa11.7□□□□□ -0.54
SNX17-207ENST00000489402 TMEM106CQ9BVX2 250 aa11.7□□□□□ -0.54
SNX17-207ENST00000489402 ZCCHC17Q9NP64 241 aaKnown RBP11.7□□□□□ -0.54
SNX17-207ENST00000489402 SNCAIPQ9Y6H5 919 aa11.7□□□□□ -0.54
SNX17-207ENST00000489402 AK9Q5TCS8 1911 aa11.7□□□□□ -0.54
SNX17-207ENST00000489402 PPIL2Q13356 520 aa11.69□□□□□ -0.54
SNX17-207ENST00000489402 ALDH1L2Q3SY69 923 aa11.69□□□□□ -0.54
SNX17-207ENST00000489402 SLC9C1Q4G0N8 1177 aa11.69□□□□□ -0.54
SNX17-207ENST00000489402 ZNF341Q9BYN7 854 aa11.69□□□□□ -0.54
SNX17-207ENST00000489402 SMC4Q9NTJ3 1288 aa11.69□□□□□ -0.54
SNX17-207ENST00000489402 GNL3LQ9NVN8 582 aaKnown RBP11.69□□□□□ -0.54
SNX17-207ENST00000489402 IRF6O14896 467 aa11.68□□□□□ -0.54
SNX17-207ENST00000489402 TLR2O60603 784 aa11.68□□□□□ -0.54
SNX17-207ENST00000489402 UBTFL1P0CB47 393 aaPredicted RBP11.68□□□□□ -0.54
SNX17-207ENST00000489402 SLURP2P0DP57 97 aa11.68□□□□□ -0.54
SNX17-207ENST00000489402 SLFN5Q08AF3 891 aa11.68□□□□□ -0.54
SNX17-207ENST00000489402 ATG9AQ7Z3C6 839 aa11.68□□□□□ -0.54
SNX17-207ENST00000489402 ZKSCAN4Q969J2 545 aaPredicted RBP11.68□□□□□ -0.54
SNX17-207ENST00000489402 FBXO3Q9UK99 471 aa11.68□□□□□ -0.54
SNX17-207ENST00000489402 HDAC5Q9UQL6 1122 aa11.68□□□□□ -0.54
SNX17-207ENST00000489402 PTCH2Q9Y6C5 1203 aa11.68□□□□□ -0.54
SNX17-207ENST00000489402 BTBD19C9JJ37 291 aa11.67□□□□□ -0.54
SNX17-207ENST00000489402 ECM2O94769 699 aaPredicted RBP11.67□□□□□ -0.54
SNX17-207ENST00000489402 GNRH1P01148 92 aa11.67□□□□□ -0.54
SNX17-207ENST00000489402 LDHBP07195 334 aaKnown RBP11.67□□□□□ -0.54
SNX17-207ENST00000489402 EN2P19622 333 aaPredicted RBP11.67□□□□□ -0.54
SNX17-207ENST00000489402 PPATQ06203 517 aa11.67□□□□□ -0.54
SNX17-207ENST00000489402 ATP2B3Q16720 1220 aa11.67□□□□□ -0.54
SNX17-207ENST00000489402 SLC4A8Q2Y0W8 1093 aa11.67□□□□□ -0.54
SNX17-207ENST00000489402 MIGA2Q7L4E1 593 aa11.67□□□□□ -0.54
SNX17-207ENST00000489402 FAM151AQ8WW52 585 aa11.67□□□□□ -0.54
SNX17-207ENST00000489402 ZNF333Q96JL9 665 aa11.67□□□□□ -0.54
SNX17-207ENST00000489402 SIL1Q9H173 461 aa11.67□□□□□ -0.54
SNX17-207ENST00000489402 CEP126Q9P2H0 1117 aa11.67□□□□□ -0.54
SNX17-207ENST00000489402 DAGLAQ9Y4D2 1042 aa11.67□□□□□ -0.54
SNX17-207ENST00000489402 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.67□□□□□ -0.54
SNX17-207ENST00000489402 CIAO1O76071 339 aa11.66□□□□□ -0.54
SNX17-207ENST00000489402 LACTBP83111 547 aaPredicted RBP11.66□□□□□ -0.54
SNX17-207ENST00000489402 TCP10Q12799 353 aa11.66□□□□□ -0.54
SNX17-207ENST00000489402 DIXDC1Q155Q3 683 aa11.66□□□□□ -0.54
SNX17-207ENST00000489402 ZFPM1Q8IX07 1006 aa11.66□□□□□ -0.54
SNX17-207ENST00000489402 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.66□□□□□ -0.54
SNX17-207ENST00000489402 ARHGAP39Q9C0H5 1083 aa11.66□□□□□ -0.54
SNX17-207ENST00000489402 TNNQ9UQP3 1299 aa11.66□□□□□ -0.54
SNX17-207ENST00000489402 SEMA3EO15041 775 aa11.65□□□□□ -0.54
SNX17-207ENST00000489402 PRDX5P30044 214 aa11.65□□□□□ -0.54
SNX17-207ENST00000489402 INPP5BP32019 993 aa11.65□□□□□ -0.54
SNX17-207ENST00000489402 PRMT2P55345 433 aa11.65□□□□□ -0.54
SNX17-207ENST00000489402 CDC42EP5Q6NZY7 148 aa11.65□□□□□ -0.54
SNX17-207ENST00000489402 ANKRD23Q86SG2 305 aa11.65□□□□□ -0.54
SNX17-207ENST00000489402 TRMT2AQ8IZ69 625 aaKnown RBP11.65□□□□□ -0.54
SNX17-207ENST00000489402 DENND2AQ9ULE3 1009 aa11.65□□□□□ -0.54
SNX17-207ENST00000489402 PA2G4Q9UQ80 394 aaKnown RBP11.65□□□□□ -0.54
SNX17-207ENST00000489402 DOCK2Q92608 1830 aa11.65□□□□□ -0.55
SNX17-207ENST00000489402 SALL1Q9NSC2 1324 aa11.64□□□□□ -0.55
SNX17-207ENST00000489402 CT47B1P0C2W7 299 aaPredicted RBP11.64□□□□□ -0.55
SNX17-207ENST00000489402 CTGFP29279 349 aa11.64□□□□□ -0.55
SNX17-207ENST00000489402 ADORA1P30542 326 aa11.64□□□□□ -0.55
SNX17-207ENST00000489402 IL15P40933 162 aaPredicted RBP11.64□□□□□ -0.55
SNX17-207ENST00000489402 NFIAQ12857 509 aa11.64□□□□□ -0.55
SNX17-207ENST00000489402 ZGPATQ8N5A5 531 aaKnown RBP11.64□□□□□ -0.55
SNX17-207ENST00000489402 API5Q9BZZ5 524 aaKnown RBP11.64□□□□□ -0.55
SNX17-207ENST00000489402 USP40Q9NVE5 1235 aa11.64□□□□□ -0.55
SNX17-207ENST00000489402 LRRFIP2Q9Y608 721 aaKnown RBP11.64□□□□□ -0.55
SNX17-207ENST00000489402 KIAA0100Q14667 2235 aaKnown RBP11.64□□□□□ -0.55
SNX17-207ENST00000489402 MYH2Q9UKX2 1941 aa11.64□□□□□ -0.55
SNX17-207ENST00000489402 PDHXO00330 501 aa11.63□□□□□ -0.55
SNX17-207ENST00000489402 MYCP01106 439 aaPredicted RBP11.63□□□□□ -0.55
SNX17-207ENST00000489402 HOXD10P28358 340 aa11.63□□□□□ -0.55
SNX17-207ENST00000489402 PHKA1P46020 1223 aa11.63□□□□□ -0.55
SNX17-207ENST00000489402 HABP4Q5JVS0 413 aaKnown RBP11.63□□□□□ -0.55
SNX17-207ENST00000489402 NOL9Q5SY16 702 aaKnown RBP11.63□□□□□ -0.55
SNX17-207ENST00000489402 SLF2Q8IX21 1173 aa11.63□□□□□ -0.55
SNX17-207ENST00000489402 SH3TC2Q8TF17 1288 aa11.63□□□□□ -0.55
SNX17-207ENST00000489402 CPA4Q9UI42 421 aa11.63□□□□□ -0.55
SNX17-207ENST00000489402 ZNF112Q9UJU3 913 aa11.63□□□□□ -0.55
SNX17-207ENST00000489402 NOB1Q9ULX3 412 aaKnown RBP11.63□□□□□ -0.55
SNX17-207ENST00000489402 KCNH4Q9UQ05 1017 aa11.63□□□□□ -0.55
SNX17-207ENST00000489402 FMNL1O95466 1100 aaPredicted RBP11.62□□□□□ -0.55
SNX17-207ENST00000489402 C17orf99Q6UX52 265 aa11.62□□□□□ -0.55
SNX17-207ENST00000489402 DZIP1Q86YF9 867 aaKnown RBP11.62□□□□□ -0.55
SNX17-207ENST00000489402 ZSCAN29Q8IWY8 852 aaPredicted RBP11.62□□□□□ -0.55
SNX17-207ENST00000489402 PARK7Q99497 189 aaKnown RBP11.62□□□□□ -0.55
SNX17-207ENST00000489402 PICK1Q9NRD5 415 aa11.62□□□□□ -0.55
SNX17-207ENST00000489402 FAM198AQ9UFP1 575 aa11.62□□□□□ -0.55
SNX17-207ENST00000489402 SZT2Q5T011 3432 aa11.61□□□□□ -0.55
SNX17-207ENST00000489402 CXCL11O14625 94 aa11.61□□□□□ -0.55
SNX17-207ENST00000489402 ENTPD3O75355 529 aa11.61□□□□□ -0.55
SNX17-207ENST00000489402 PSMC4P43686 418 aa11.61□□□□□ -0.55
SNX17-207ENST00000489402 RGS3P49796 1198 aa11.61□□□□□ -0.55
SNX17-207ENST00000489402 MOGSQ13724 837 aa11.61□□□□□ -0.55
SNX17-207ENST00000489402 SPTY2D1Q68D10 685 aaPredicted RBP11.61□□□□□ -0.55
SNX17-207ENST00000489402 CCDC102BQ68D86 513 aa11.61□□□□□ -0.55
SNX17-207ENST00000489402 RAET1EQ8TD07 263 aa11.61□□□□□ -0.55
SNX17-207ENST00000489402 MEIS3Q99687 375 aa11.61□□□□□ -0.55
SNX17-207ENST00000489402 IDI2Q9BXS1 227 aa11.61□□□□□ -0.55
SNX17-207ENST00000489402 COPRSQ9NQ92 184 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms