RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 CERS3Q8IU89 383 aa5.64□□□□□ -1.51
CDC42BPA-213ENST00000488131 NPAS4Q8IUM7 802 aa5.64□□□□□ -1.51
CDC42BPA-213ENST00000488131 TRIM22Q8IYM9 498 aa5.64□□□□□ -1.51
CDC42BPA-213ENST00000488131 TXLNBQ8N3L3 684 aa5.64□□□□□ -1.51
CDC42BPA-213ENST00000488131 ZGPATQ8N5A5 531 aaKnown RBP5.64□□□□□ -1.51
CDC42BPA-213ENST00000488131 CCDC112Q8NEF3 446 aa5.64□□□□□ -1.51
CDC42BPA-213ENST00000488131 INTS4Q96HW7 963 aaKnown RBP5.64□□□□□ -1.51
CDC42BPA-213ENST00000488131 TRERF1Q96PN7 1200 aa5.64□□□□□ -1.51
CDC42BPA-213ENST00000488131 USP26Q9BXU7 913 aa5.64□□□□□ -1.51
CDC42BPA-213ENST00000488131 LNPKQ9C0E8 428 aa5.64□□□□□ -1.51
CDC42BPA-213ENST00000488131 ATG3Q9NT62 314 aa5.64□□□□□ -1.51
CDC42BPA-213ENST00000488131 CABP1Q9NZU7 370 aa5.64□□□□□ -1.51
CDC42BPA-213ENST00000488131 RPAP1Q9BWH6 1393 aaPredicted RBP5.63□□□□□ -1.51
CDC42BPA-213ENST00000488131 SERTM1A2A2V5 107 aa5.63□□□□□ -1.51
CDC42BPA-213ENST00000488131 ERICH4A6NGS2 130 aa5.63□□□□□ -1.51
CDC42BPA-213ENST00000488131 H2AFXP16104 143 aaPredicted RBP5.63□□□□□ -1.51
CDC42BPA-213ENST00000488131 GUCY2CP25092 1073 aa5.63□□□□□ -1.51
CDC42BPA-213ENST00000488131 CASQ1P31415 396 aa5.63□□□□□ -1.51
CDC42BPA-213ENST00000488131 MCM2P49736 904 aa5.63□□□□□ -1.51
CDC42BPA-213ENST00000488131 RNF144AP50876 292 aaPredicted RBP5.63□□□□□ -1.51
CDC42BPA-213ENST00000488131 HIRAP54198 1017 aaPredicted RBP5.63□□□□□ -1.51
CDC42BPA-213ENST00000488131 ALDH16A1Q8IZ83 802 aa5.63□□□□□ -1.51
CDC42BPA-213ENST00000488131 C7orf43Q8WVR3 580 aa5.63□□□□□ -1.51
CDC42BPA-213ENST00000488131 VTI1AQ96AJ9 217 aa5.63□□□□□ -1.51
CDC42BPA-213ENST00000488131 IL17RAQ96F46 866 aa5.63□□□□□ -1.51
CDC42BPA-213ENST00000488131 MYO19Q96H55 970 aa5.63□□□□□ -1.51
CDC42BPA-213ENST00000488131 NGLY1Q96IV0 654 aa5.63□□□□□ -1.51
CDC42BPA-213ENST00000488131 NLRP3Q96P20 1036 aa5.63□□□□□ -1.51
CDC42BPA-213ENST00000488131 ZSCAN10Q96SZ4 725 aaPredicted RBP5.63□□□□□ -1.51
CDC42BPA-213ENST00000488131 NOL10Q9BSC4 688 aaKnown RBP5.63□□□□□ -1.51
CDC42BPA-213ENST00000488131 BCL2L13Q9BXK5 485 aa5.63□□□□□ -1.51
CDC42BPA-213ENST00000488131 LRRC4BQ9NT99 713 aa5.63□□□□□ -1.51
CDC42BPA-213ENST00000488131 CFDP1Q9UEE9 299 aaPredicted RBP5.63□□□□□ -1.51
CDC42BPA-213ENST00000488131 RSPH14Q9UHP6 348 aa5.63□□□□□ -1.51
CDC42BPA-213ENST00000488131 PTCH1Q13635 1447 aa5.63□□□□□ -1.51
CDC42BPA-213ENST00000488131 PTPRCP08575 1304 aa5.63□□□□□ -1.51
CDC42BPA-213ENST00000488131 IL16Q14005 1332 aa5.63□□□□□ -1.51
CDC42BPA-213ENST00000488131 ERVK-7P63135 1459 aa5.63□□□□□ -1.51
CDC42BPA-213ENST00000488131 AATKQ6ZMQ8 1374 aa5.62□□□□□ -1.51
CDC42BPA-213ENST00000488131 TXLNAP40222 546 aa5.62□□□□□ -1.51
CDC42BPA-213ENST00000488131 TAGLNQ01995 201 aaKnown RBP5.62□□□□□ -1.51
CDC42BPA-213ENST00000488131 FBXO38Q6PIJ6 1188 aa5.62□□□□□ -1.51
CDC42BPA-213ENST00000488131 ITPRIPQ8IWB1 547 aa5.62□□□□□ -1.51
CDC42BPA-213ENST00000488131 TCP11L2Q8N4U5 519 aa5.62□□□□□ -1.51
CDC42BPA-213ENST00000488131 ERO1AQ96HE7 468 aa5.62□□□□□ -1.51
CDC42BPA-213ENST00000488131 ZNF446Q9NWS9 450 aa5.62□□□□□ -1.51
CDC42BPA-213ENST00000488131 POLKQ9UBT6 870 aa5.62□□□□□ -1.51
CDC42BPA-213ENST00000488131 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.62□□□□□ -1.51
CDC42BPA-213ENST00000488131 PRG4Q92954 1404 aaPredicted RBP5.62□□□□□ -1.51
CDC42BPA-213ENST00000488131 TRAPPC8Q9Y2L5 1435 aa5.62□□□□□ -1.51
CDC42BPA-213ENST00000488131 ZC3H13Q5T200 1668 aaKnown RBP5.62□□□□□ -1.51
CDC42BPA-213ENST00000488131 TUBGCP6Q96RT7 1819 aa5.62□□□□□ -1.51
CDC42BPA-213ENST00000488131 RTL1A6NKG5 1358 aa5.62□□□□□ -1.51
CDC42BPA-213ENST00000488131 TARBP1Q13395 1621 aaKnown RBP5.62□□□□□ -1.51
CDC42BPA-213ENST00000488131 SBNO2Q9Y2G9 1366 aa5.62□□□□□ -1.51
CDC42BPA-213ENST00000488131 RBM47A0AV96 593 aaKnown RBP5.62□□□□□ -1.51
CDC42BPA-213ENST00000488131 FZD6O60353 706 aa5.62□□□□□ -1.51
CDC42BPA-213ENST00000488131 HCLS1P14317 486 aaPredicted RBP5.62□□□□□ -1.51
CDC42BPA-213ENST00000488131 GSPT1P15170 499 aaKnown RBP5.62□□□□□ -1.51
CDC42BPA-213ENST00000488131 MX1P20591 662 aa5.62□□□□□ -1.51
CDC42BPA-213ENST00000488131 MAPK1P28482 360 aa5.62□□□□□ -1.51
CDC42BPA-213ENST00000488131 TNNT3P45378 269 aaPredicted RBP5.62□□□□□ -1.51
CDC42BPA-213ENST00000488131 EIF1AXP47813 144 aaKnown RBP5.62□□□□□ -1.51
CDC42BPA-213ENST00000488131 GTF2A1P52655 376 aaPredicted RBP5.62□□□□□ -1.51
CDC42BPA-213ENST00000488131 BMS1Q14692 1282 aaKnown RBP5.62□□□□□ -1.51
CDC42BPA-213ENST00000488131 C4orf17Q53FE4 359 aa5.62□□□□□ -1.51
CDC42BPA-213ENST00000488131 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.62□□□□□ -1.51
CDC42BPA-213ENST00000488131 TMEM57Q8N5G2 664 aa5.62□□□□□ -1.51
CDC42BPA-213ENST00000488131 CEP120Q8N960 986 aa5.62□□□□□ -1.51
CDC42BPA-213ENST00000488131 IQUBQ8NA54 791 aa5.62□□□□□ -1.51
CDC42BPA-213ENST00000488131 SLC26A8Q96RN1 970 aa5.62□□□□□ -1.51
CDC42BPA-213ENST00000488131 UBXN6Q9BZV1 441 aa5.62□□□□□ -1.51
CDC42BPA-213ENST00000488131 KCND1Q9NSA2 647 aa5.62□□□□□ -1.51
CDC42BPA-213ENST00000488131 SMC4Q9NTJ3 1288 aa5.62□□□□□ -1.51
CDC42BPA-213ENST00000488131 CCDC87Q9NVE4 849 aa5.62□□□□□ -1.51
CDC42BPA-213ENST00000488131 KLK14Q9P0G3 267 aa5.62□□□□□ -1.51
CDC42BPA-213ENST00000488131 STIM2Q9P246 746 aa5.62□□□□□ -1.51
CDC42BPA-213ENST00000488131 DCTN4Q9UJW0 460 aa5.62□□□□□ -1.51
CDC42BPA-213ENST00000488131 ZNF232Q9UNY5 417 aa5.62□□□□□ -1.51
CDC42BPA-213ENST00000488131 CCDC171Q6TFL3 1326 aa5.61□□□□□ -1.51
CDC42BPA-213ENST00000488131 URB2Q14146 1524 aaKnown RBP5.61□□□□□ -1.51
CDC42BPA-213ENST00000488131 MYO1CO00159 1063 aa5.61□□□□□ -1.51
CDC42BPA-213ENST00000488131 AP5Z1O43299 807 aa5.61□□□□□ -1.51
CDC42BPA-213ENST00000488131 FAM13AO94988 1023 aa5.61□□□□□ -1.51
CDC42BPA-213ENST00000488131 TNNT1P13805 278 aa5.61□□□□□ -1.51
CDC42BPA-213ENST00000488131 GPC1P35052 558 aa5.61□□□□□ -1.51
CDC42BPA-213ENST00000488131 INTS3Q68E01 1043 aaKnown RBP5.61□□□□□ -1.51
CDC42BPA-213ENST00000488131 ATCAYQ86WG3 371 aa5.61□□□□□ -1.51
CDC42BPA-213ENST00000488131 ETFBKMTQ8IXQ9 262 aa5.61□□□□□ -1.51
CDC42BPA-213ENST00000488131 PHACTR1Q9C0D0 580 aa5.61□□□□□ -1.51
CDC42BPA-213ENST00000488131 GOLGA2P5Q9HBQ8 144 aa5.61□□□□□ -1.51
CDC42BPA-213ENST00000488131 BCS1LQ9Y276 419 aa5.61□□□□□ -1.51
CDC42BPA-213ENST00000488131 FHOD1Q9Y613 1164 aa5.61□□□□□ -1.51
CDC42BPA-213ENST00000488131 RGS12O14924 1447 aa5.61□□□□□ -1.51
CDC42BPA-213ENST00000488131 KNDC1Q76NI1 1749 aa5.61□□□□□ -1.51
CDC42BPA-213ENST00000488131 CDC42BPBQ9Y5S2 1711 aa5.61□□□□□ -1.51
CDC42BPA-213ENST00000488131 TRPM2O94759 1503 aa5.61□□□□□ -1.51
CDC42BPA-213ENST00000488131 PLEKHG2Q9H7P9 1386 aa5.61□□□□□ -1.51
CDC42BPA-213ENST00000488131 IPO8O15397 1037 aaKnown RBP5.6□□□□□ -1.51
CDC42BPA-213ENST00000488131 IGHA2P01877 340 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms