RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 ZDHHC9Q9Y397 364 aa13.53□□□□□ -0.24
TRA2B-214ENST00000487615 CALML3P27482 149 aa13.53□□□□□ -0.24
TRA2B-214ENST00000487615 CCDC96Q2M329 555 aa13.53□□□□□ -0.24
TRA2B-214ENST00000487615 DIS3L2Q8IYB7 885 aaKnown RBP13.53□□□□□ -0.24
TRA2B-214ENST00000487615 CAGE1Q8TC20 777 aa13.53□□□□□ -0.24
TRA2B-214ENST00000487615 UBXN4Q92575 508 aa13.53□□□□□ -0.24
TRA2B-214ENST00000487615 OSBP2Q969R2 916 aa13.53□□□□□ -0.24
TRA2B-214ENST00000487615 VAT1LQ9HCJ6 419 aa13.53□□□□□ -0.24
TRA2B-214ENST00000487615 FER1L4A9Z1Z3 1794 aa13.53□□□□□ -0.24
TRA2B-214ENST00000487615 RABL6Q3YEC7 729 aaPredicted RBP13.53□□□□□ -0.24
TRA2B-214ENST00000487615 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.53□□□□□ -0.24
TRA2B-214ENST00000487615 JAG2Q9Y219 1238 aa13.53□□□□□ -0.24
TRA2B-214ENST00000487615 NBPF26B4DH59 902 aa13.52□□□□□ -0.24
TRA2B-214ENST00000487615 NR1I2O75469 434 aa13.52□□□□□ -0.24
TRA2B-214ENST00000487615 CRKLP46109 303 aaKnown RBP13.52□□□□□ -0.24
TRA2B-214ENST00000487615 TMEM266Q2M3C6 531 aa13.52□□□□□ -0.24
TRA2B-214ENST00000487615 NBPF14Q5TI25 921 aa13.52□□□□□ -0.24
TRA2B-214ENST00000487615 NBPF10Q6P3W6 841 aaKnown RBP13.52□□□□□ -0.24
TRA2B-214ENST00000487615 IFNL3Q8IZI9 196 aa13.52□□□□□ -0.24
TRA2B-214ENST00000487615 NBPF15Q8N660 670 aa13.52□□□□□ -0.24
TRA2B-214ENST00000487615 NSUN7Q8NE18 718 aaKnown RBP13.52□□□□□ -0.24
TRA2B-214ENST00000487615 ERVV-1B6SEH8 477 aa13.52□□□□□ -0.25
TRA2B-214ENST00000487615 M0R2C6 588 aa13.52□□□□□ -0.25
TRA2B-214ENST00000487615 CYP2E1P05181 493 aaPredicted RBP13.52□□□□□ -0.25
TRA2B-214ENST00000487615 SNW1Q13573 536 aaKnown RBP13.52□□□□□ -0.25
TRA2B-214ENST00000487615 TANGO6Q9C0B7 1094 aa13.52□□□□□ -0.25
TRA2B-214ENST00000487615 PAXBP1Q9Y5B6 917 aa13.52□□□□□ -0.25
TRA2B-214ENST00000487615 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.52□□□□□ -0.25
TRA2B-214ENST00000487615 TMOD2Q9NZR1 351 aa13.52□□□□□ -0.25
TRA2B-214ENST00000487615 RIMS1Q86UR5 1692 aaKnown RBP13.52□□□□□ -0.25
TRA2B-214ENST00000487615 PRDM1O75626 825 aa13.51□□□□□ -0.25
TRA2B-214ENST00000487615 TRAPPC3LQ5T215 181 aa13.51□□□□□ -0.25
TRA2B-214ENST00000487615 CEP135Q66GS9 1140 aa13.51□□□□□ -0.25
TRA2B-214ENST00000487615 PI16Q6UXB8 463 aa13.51□□□□□ -0.25
TRA2B-214ENST00000487615 DHX58Q96C10 678 aa13.51□□□□□ -0.25
TRA2B-214ENST00000487615 ACBD3Q9H3P7 528 aa13.51□□□□□ -0.25
TRA2B-214ENST00000487615 DEF6Q9H4E7 631 aa13.51□□□□□ -0.25
TRA2B-214ENST00000487615 RFX7Q2KHR2 1363 aa13.51□□□□□ -0.25
TRA2B-214ENST00000487615 PPP2R5BQ15173 497 aa13.51□□□□□ -0.25
TRA2B-214ENST00000487615 ADALQ6DHV7 355 aa13.51□□□□□ -0.25
TRA2B-214ENST00000487615 TTLL11Q8NHH1 800 aa13.51□□□□□ -0.25
TRA2B-214ENST00000487615 CABP5Q9NP86 173 aa13.51□□□□□ -0.25
TRA2B-214ENST00000487615 URI1O94763 535 aaPredicted RBP13.51□□□□□ -0.25
TRA2B-214ENST00000487615 ZNF202O95125 648 aa13.51□□□□□ -0.25
TRA2B-214ENST00000487615 ADD1P35611 737 aaKnown RBP13.51□□□□□ -0.25
TRA2B-214ENST00000487615 BCAMP50895 628 aa13.51□□□□□ -0.25
TRA2B-214ENST00000487615 HSP90AA4PQ58FG1 418 aa13.51□□□□□ -0.25
TRA2B-214ENST00000487615 CNBD1Q8NA66 436 aa13.51□□□□□ -0.25
TRA2B-214ENST00000487615 CPLX3Q8WVH0 158 aa13.51□□□□□ -0.25
TRA2B-214ENST00000487615 IFNKQ9P0W0 207 aa13.51□□□□□ -0.25
TRA2B-214ENST00000487615 PLCG2P16885 1265 aa13.51□□□□□ -0.25
TRA2B-214ENST00000487615 TMEM87AQ8NBN3 555 aa13.51□□□□□ -0.25
TRA2B-214ENST00000487615 PDCL3Q9H2J4 239 aa13.51□□□□□ -0.25
TRA2B-214ENST00000487615 RPS8P62241 208 aaKnown RBP13.5□□□□□ -0.25
TRA2B-214ENST00000487615 HSP90B2PQ58FF3 399 aa13.5□□□□□ -0.25
TRA2B-214ENST00000487615 CUTAO60888 179 aa13.5□□□□□ -0.25
TRA2B-214ENST00000487615 ADD2P35612 726 aa13.5□□□□□ -0.25
TRA2B-214ENST00000487615 HEATR3Q7Z4Q2 680 aa13.5□□□□□ -0.25
TRA2B-214ENST00000487615 FBXO18Q8NFZ0 1043 aa13.5□□□□□ -0.25
TRA2B-214ENST00000487615 KCNH3Q9ULD8 1083 aa13.5□□□□□ -0.25
TRA2B-214ENST00000487615 HLA-DOAP06340 250 aa13.5□□□□□ -0.25
TRA2B-214ENST00000487615 ZNF75DP51815 510 aa13.5□□□□□ -0.25
TRA2B-214ENST00000487615 MYL5Q02045 173 aa13.5□□□□□ -0.25
TRA2B-214ENST00000487615 PDIA6Q15084 440 aa13.5□□□□□ -0.25
TRA2B-214ENST00000487615 RMND1Q9NWS8 449 aa13.5□□□□□ -0.25
TRA2B-214ENST00000487615 NCOA3Q9Y6Q9 1424 aa13.5□□□□□ -0.25
TRA2B-214ENST00000487615 UBR1Q8IWV7 1749 aa13.49□□□□□ -0.25
TRA2B-214ENST00000487615 ZMYM6O95789 1325 aa13.49□□□□□ -0.25
TRA2B-214ENST00000487615 CHRNDQ07001 517 aa13.49□□□□□ -0.25
TRA2B-214ENST00000487615 TOB2Q14106 344 aaPredicted RBP13.49□□□□□ -0.25
TRA2B-214ENST00000487615 CALML4Q96GE6 196 aa13.49□□□□□ -0.25
TRA2B-214ENST00000487615 ISCA1Q9BUE6 129 aa13.49□□□□□ -0.25
TRA2B-214ENST00000487615 PUS7LQ9H0K6 701 aaKnown RBP13.49□□□□□ -0.25
TRA2B-214ENST00000487615 UTYO14607 1347 aa13.49□□□□□ -0.25
TRA2B-214ENST00000487615 GOLGA6L9A6NEM1 432 aa13.49□□□□□ -0.25
TRA2B-214ENST00000487615 AMPD3Q01432 767 aa13.49□□□□□ -0.25
TRA2B-214ENST00000487615 PPARAQ07869 468 aa13.49□□□□□ -0.25
TRA2B-214ENST00000487615 HLFQ16534 295 aa13.49□□□□□ -0.25
TRA2B-214ENST00000487615 LUC7LQ9NQ29 371 aaKnown RBP13.49□□□□□ -0.25
TRA2B-214ENST00000487615 TFCP2L1Q9NZI6 479 aa13.49□□□□□ -0.25
TRA2B-214ENST00000487615 GYG1P46976 350 aa13.49□□□□□ -0.25
TRA2B-214ENST00000487615 FOXO4P98177 505 aa13.49□□□□□ -0.25
TRA2B-214ENST00000487615 NUP88Q99567 741 aaPredicted RBP13.49□□□□□ -0.25
TRA2B-214ENST00000487615 AATFQ9NY61 560 aaKnown RBP eCLIP13.49□□□□□ -0.25
TRA2B-214ENST00000487615 V9GY48 417 aaPredicted RBP13.49□□□□□ -0.25
TRA2B-214ENST00000487615 OVOS2A0A0G2JMS6 1433 aa13.48□□□□□ -0.25
TRA2B-214ENST00000487615 STAT6P42226 847 aa13.48□□□□□ -0.25
TRA2B-214ENST00000487615 MED23Q9ULK4 1368 aa13.48□□□□□ -0.25
TRA2B-214ENST00000487615 KIF5CO60282 957 aa13.48□□□□□ -0.25
TRA2B-214ENST00000487615 ZNF76P36508 570 aa13.48□□□□□ -0.25
TRA2B-214ENST00000487615 WDR66Q8TBY9 1149 aa13.48□□□□□ -0.25
TRA2B-214ENST00000487615 IL25Q9H293 177 aa13.48□□□□□ -0.25
TRA2B-214ENST00000487615 CARMIL3Q8ND23 1372 aa13.48□□□□□ -0.25
TRA2B-214ENST00000487615 SALL3Q9BXA9 1300 aa13.48□□□□□ -0.25
TRA2B-214ENST00000487615 N4BP3O15049 544 aa13.48□□□□□ -0.25
TRA2B-214ENST00000487615 DDIT3P35638 169 aa13.48□□□□□ -0.25
TRA2B-214ENST00000487615 TRIM28Q13263 835 aaKnown RBP13.48□□□□□ -0.25
TRA2B-214ENST00000487615 RRAGBQ5VZM2 374 aa13.48□□□□□ -0.25
TRA2B-214ENST00000487615 ZNF654Q8IZM8 581 aa13.48□□□□□ -0.25
TRA2B-214ENST00000487615 KLHL34Q8N239 644 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms