RNA–Protein interactions for RNA: ENST00000487485.1

TOP3B-216, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 725 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-216ENST00000487485 CFHR5Q9BXR6 569 aa13.05□□□□□ -0.32
TOP3B-216ENST00000487485 CENPFP49454 3210 aa13.04□□□□□ -0.32
TOP3B-216ENST00000487485 NF2P35240 595 aa13.04□□□□□ -0.32
TOP3B-216ENST00000487485 MCAMP43121 646 aa13.04□□□□□ -0.32
TOP3B-216ENST00000487485 SREBF2Q12772 1141 aa13.04□□□□□ -0.32
TOP3B-216ENST00000487485 HABP4Q5JVS0 413 aaKnown RBP13.04□□□□□ -0.32
TOP3B-216ENST00000487485 MFSD14BQ5SR56 506 aa13.04□□□□□ -0.32
TOP3B-216ENST00000487485 SPRYD7Q5W111 196 aa13.04□□□□□ -0.32
TOP3B-216ENST00000487485 CERS5Q8N5B7 392 aa13.04□□□□□ -0.32
TOP3B-216ENST00000487485 SPATA5Q8NB90 893 aa13.04□□□□□ -0.32
TOP3B-216ENST00000487485 WDR66Q8TBY9 1149 aa13.04□□□□□ -0.32
TOP3B-216ENST00000487485 TBC1D22AQ8WUA7 517 aa13.04□□□□□ -0.32
TOP3B-216ENST00000487485 LNPKQ9C0E8 428 aa13.04□□□□□ -0.32
TOP3B-216ENST00000487485 PPP4R2Q9NY27 417 aa13.04□□□□□ -0.32
TOP3B-216ENST00000487485 HMG20BQ9P0W2 317 aa13.04□□□□□ -0.32
TOP3B-216ENST00000487485 FZD1Q9UP38 647 aa13.04□□□□□ -0.32
TOP3B-216ENST00000487485 MYO3BQ8WXR4 1341 aa13.04□□□□□ -0.32
TOP3B-216ENST00000487485 MYO5AQ9Y4I1 1855 aaKnown RBP13.04□□□□□ -0.32
TOP3B-216ENST00000487485 COL1A1P02452 1464 aaPredicted RBP13.04□□□□□ -0.32
TOP3B-216ENST00000487485 TRIOBPQ9H2D6 2365 aa13.03□□□□□ -0.32
TOP3B-216ENST00000487485 POTEFA5A3E0 1075 aa13.03□□□□□ -0.32
TOP3B-216ENST00000487485 LDLRAD1Q5T700 205 aa13.03□□□□□ -0.32
TOP3B-216ENST00000487485 PI16Q6UXB8 463 aa13.03□□□□□ -0.32
TOP3B-216ENST00000487485 CENPQQ7L2Z9 268 aaPredicted RBP13.03□□□□□ -0.32
TOP3B-216ENST00000487485 ARMC9Q7Z3E5 817 aa13.03□□□□□ -0.32
TOP3B-216ENST00000487485 OGFOD1Q8N543 542 aa13.03□□□□□ -0.32
TOP3B-216ENST00000487485 SNRKQ9NRH2 765 aa13.03□□□□□ -0.32
TOP3B-216ENST00000487485 PDS5AQ29RF7 1337 aaKnown RBP13.03□□□□□ -0.32
TOP3B-216ENST00000487485 ATP5JP18859 108 aa13.02□□□□□ -0.33
TOP3B-216ENST00000487485 KIAA0825Q8IV33 1275 aa13.02□□□□□ -0.33
TOP3B-216ENST00000487485 OTUD7AQ8TE49 926 aaPredicted RBP13.02□□□□□ -0.33
TOP3B-216ENST00000487485 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.02□□□□□ -0.33
TOP3B-216ENST00000487485 GPATCH3Q96I76 525 aa13.02□□□□□ -0.33
TOP3B-216ENST00000487485 ECHDC1Q9NTX5 307 aa13.02□□□□□ -0.33
TOP3B-216ENST00000487485 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.02□□□□□ -0.33
TOP3B-216ENST00000487485 ANGEL1Q9UNK9 670 aaKnown RBP13.02□□□□□ -0.33
TOP3B-216ENST00000487485 TRIM17Q9Y577 477 aa13.02□□□□□ -0.33
TOP3B-216ENST00000487485 F8W031 263 aaPredicted RBP13.01□□□□□ -0.33
TOP3B-216ENST00000487485 CYP2E1P05181 493 aaPredicted RBP13.01□□□□□ -0.33
TOP3B-216ENST00000487485 MX1P20591 662 aa13.01□□□□□ -0.33
TOP3B-216ENST00000487485 ZAP70P43403 619 aa13.01□□□□□ -0.33
TOP3B-216ENST00000487485 TBC1D9Q6ZT07 1266 aa13.01□□□□□ -0.33
TOP3B-216ENST00000487485 OTOP1Q7RTM1 612 aa13.01□□□□□ -0.33
TOP3B-216ENST00000487485 BOLA2Q9H3K6 86 aa13.01□□□□□ -0.33
TOP3B-216ENST00000487485 ABCF2Q9UG63 623 aa13.01□□□□□ -0.33
TOP3B-216ENST00000487485 NDUFB9Q9Y6M9 179 aa13.01□□□□□ -0.33
TOP3B-216ENST00000487485 TTC41PQ6P2S7 1318 aa13.01□□□□□ -0.33
TOP3B-216ENST00000487485 SALL3Q9BXA9 1300 aa13.01□□□□□ -0.33
TOP3B-216ENST00000487485 SALL1Q9NSC2 1324 aa13.01□□□□□ -0.33
TOP3B-216ENST00000487485 ALDH1A1P00352 501 aa13□□□□□ -0.33
TOP3B-216ENST00000487485 GRIK5Q16478 980 aa13□□□□□ -0.33
TOP3B-216ENST00000487485 TSHZ3Q63HK5 1081 aa13□□□□□ -0.33
TOP3B-216ENST00000487485 IFNL1Q8IU54 200 aa13□□□□□ -0.33
TOP3B-216ENST00000487485 ZGPATQ8N5A5 531 aaKnown RBP13□□□□□ -0.33
TOP3B-216ENST00000487485 SLC10A4Q96EP9 437 aa13□□□□□ -0.33
TOP3B-216ENST00000487485 ZBED3Q96IU2 234 aaPredicted RBP13□□□□□ -0.33
TOP3B-216ENST00000487485 TTF2Q9UNY4 1162 aaKnown RBP13□□□□□ -0.33
TOP3B-216ENST00000487485 SUGT1Q9Y2Z0 365 aa13□□□□□ -0.33
TOP3B-216ENST00000487485 MANSC4A6NHS7 340 aaPredicted RBP12.99□□□□□ -0.33
TOP3B-216ENST00000487485 IGF2BP3O00425 579 aaKnown RBP eCLIP12.99□□□□□ -0.33
TOP3B-216ENST00000487485 ERC2O15083 957 aa12.99□□□□□ -0.33
TOP3B-216ENST00000487485 LDHBP07195 334 aaKnown RBP12.99□□□□□ -0.33
TOP3B-216ENST00000487485 PRDX5P30044 214 aa12.99□□□□□ -0.33
TOP3B-216ENST00000487485 MMP14P50281 582 aa12.99□□□□□ -0.33
TOP3B-216ENST00000487485 PDE1AP54750 535 aa12.99□□□□□ -0.33
TOP3B-216ENST00000487485 SPTY2D1Q68D10 685 aaPredicted RBP12.99□□□□□ -0.33
TOP3B-216ENST00000487485 APOBEC3FQ8IUX4 373 aaKnown RBP12.99□□□□□ -0.33
TOP3B-216ENST00000487485 CLMNQ96JQ2 1002 aa12.99□□□□□ -0.33
TOP3B-216ENST00000487485 DNAJC2Q99543 621 aaKnown RBP12.99□□□□□ -0.33
TOP3B-216ENST00000487485 HAUS7Q99871 368 aa12.99□□□□□ -0.33
TOP3B-216ENST00000487485 DEFB129Q9H1M3 183 aa12.99□□□□□ -0.33
TOP3B-216ENST00000487485 STAP2Q9UGK3 403 aa12.99□□□□□ -0.33
TOP3B-216ENST00000487485 MYH2Q9UKX2 1941 aa12.99□□□□□ -0.33
TOP3B-216ENST00000487485 DOCK2Q92608 1830 aa12.99□□□□□ -0.33
TOP3B-216ENST00000487485 GLRX3O76003 335 aaKnown RBP12.98□□□□□ -0.33
TOP3B-216ENST00000487485 EN2P19622 333 aaPredicted RBP12.98□□□□□ -0.33
TOP3B-216ENST00000487485 PDE4AP27815 886 aa12.98□□□□□ -0.33
TOP3B-216ENST00000487485 INHBEP58166 350 aa12.98□□□□□ -0.33
TOP3B-216ENST00000487485 ERICH6Q7L0X2 663 aa12.98□□□□□ -0.33
TOP3B-216ENST00000487485 PLEKHM2Q8IWE5 1019 aa12.98□□□□□ -0.33
TOP3B-216ENST00000487485 PI4K2BQ8TCG2 481 aa12.98□□□□□ -0.33
TOP3B-216ENST00000487485 ANTXR1Q9H6X2 564 aa12.98□□□□□ -0.33
TOP3B-216ENST00000487485 LRP2BPQ9P2M1 347 aa12.98□□□□□ -0.33
TOP3B-216ENST00000487485 BRCA2P51587 3418 aa12.97□□□□□ -0.33
TOP3B-216ENST00000487485 MAST3O60307 1309 aa12.97□□□□□ -0.33
TOP3B-216ENST00000487485 GOLIM4O00461 696 aa12.97□□□□□ -0.33
TOP3B-216ENST00000487485 CAP1Q01518 475 aa12.97□□□□□ -0.33
TOP3B-216ENST00000487485 TTF1Q15361 905 aaPredicted RBP12.97□□□□□ -0.33
TOP3B-216ENST00000487485 MAP3K11Q16584 847 aa12.97□□□□□ -0.33
TOP3B-216ENST00000487485 CD99L2Q8TCZ2 262 aa12.97□□□□□ -0.33
TOP3B-216ENST00000487485 WNK4Q96J92 1243 aa12.97□□□□□ -0.33
TOP3B-216ENST00000487485 PIH1D3Q9NQM4 214 aaKnown RBP12.97□□□□□ -0.33
TOP3B-216ENST00000487485 PAG1Q9NWQ8 432 aa12.97□□□□□ -0.33
TOP3B-216ENST00000487485 RAI14Q9P0K7 980 aa12.97□□□□□ -0.33
TOP3B-216ENST00000487485 PTPN22Q9Y2R2 807 aa12.97□□□□□ -0.33
TOP3B-216ENST00000487485 PCDHAC2Q9Y5I4 1007 aa12.97□□□□□ -0.33
TOP3B-216ENST00000487485 ECM29Q5VYK3 1845 aa12.97□□□□□ -0.33
TOP3B-216ENST00000487485 MYH7P12883 1935 aa12.96□□□□□ -0.33
TOP3B-216ENST00000487485 MAP4K4O95819 1239 aaPredicted RBP12.96□□□□□ -0.33
TOP3B-216ENST00000487485 CRKP46108 304 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms