RNA–Protein interactions for RNA: ENST00000487300.1

SRM-205, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 611 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-205ENST00000487300 ZBTB7BO15156 539 aaPredicted RBP27.71■■■□□ 2.03
SRM-205ENST00000487300 TBC1D8O95759 1140 aa27.71■■■□□ 2.03
SRM-205ENST00000487300 CDC42EP5Q6NZY7 148 aa27.71■■■□□ 2.03
SRM-205ENST00000487300 IFNL1Q8IU54 200 aa27.71■■■□□ 2.03
SRM-205ENST00000487300 FTSJ3Q8IY81 847 aaKnown RBP27.71■■■□□ 2.03
SRM-205ENST00000487300 TESPA1A2RU30 521 aaPredicted RBP27.7■■■□□ 2.02
SRM-205ENST00000487300 IGF2BP3O00425 579 aaKnown RBP eCLIP27.7■■■□□ 2.02
SRM-205ENST00000487300 ALDH1A1P00352 501 aa27.7■■■□□ 2.02
SRM-205ENST00000487300 VGLL4Q14135 290 aa27.7■■■□□ 2.02
SRM-205ENST00000487300 CDK5RAP2Q96SN8 1893 aa27.7■■■□□ 2.02
SRM-205ENST00000487300 ZNF296Q8WUU4 475 aaPredicted RBP27.69■■■□□ 2.02
SRM-205ENST00000487300 FAM151AQ8WW52 585 aa27.69■■■□□ 2.02
SRM-205ENST00000487300 OPTNQ96CV9 577 aa27.69■■■□□ 2.02
SRM-205ENST00000487300 GPR25O00155 361 aa27.68■■■□□ 2.02
SRM-205ENST00000487300 ARID4AP29374 1257 aaPredicted RBP27.68■■■□□ 2.02
SRM-205ENST00000487300 MAP3K9P80192 1104 aa27.68■■■□□ 2.02
SRM-205ENST00000487300 ATP8B2P98198 1209 aa27.68■■■□□ 2.02
SRM-205ENST00000487300 CTU1Q7Z7A3 348 aaKnown RBP27.68■■■□□ 2.02
SRM-205ENST00000487300 HOOK2Q96ED9 719 aa27.68■■■□□ 2.02
SRM-205ENST00000487300 R3HDMLQ9H3Y0 253 aa27.68■■■□□ 2.02
SRM-205ENST00000487300 ELP3Q9H9T3 547 aa27.68■■■□□ 2.02
SRM-205ENST00000487300 FOCADQ5VW36 1801 aa27.68■■■□□ 2.02
SRM-205ENST00000487300 TNRC18O15417 2968 aaPredicted RBP27.67■■■□□ 2.02
SRM-205ENST00000487300 NFIAQ12857 509 aa27.67■■■□□ 2.02
SRM-205ENST00000487300 G3BP1Q13283 466 aaKnown RBP eCLIP27.67■■■□□ 2.02
SRM-205ENST00000487300 ITPRIPQ8IWB1 547 aa27.67■■■□□ 2.02
SRM-205ENST00000487300 FAM163AQ96GL9 167 aaPredicted RBP27.67■■■□□ 2.02
SRM-205ENST00000487300 MS4A4AQ96JQ5 239 aa27.67■■■□□ 2.02
SRM-205ENST00000487300 GPR108Q9NPR9 543 aa27.67■■■□□ 2.02
SRM-205ENST00000487300 ATRNL1Q5VV63 1379 aa27.66■■■□□ 2.02
SRM-205ENST00000487300 C1orf115Q9H7X2 142 aa27.66■■■□□ 2.02
SRM-205ENST00000487300 HMG20BQ9P0W2 317 aa27.66■■■□□ 2.02
SRM-205ENST00000487300 FAM198AQ9UFP1 575 aa27.66■■■□□ 2.02
SRM-205ENST00000487300 SNCAIPQ9Y6H5 919 aa27.66■■■□□ 2.02
SRM-205ENST00000487300 SPDYE5A6NIY4 337 aa27.65■■■□□ 2.02
SRM-205ENST00000487300 ZNF384Q8TF68 577 aa27.65■■■□□ 2.02
SRM-205ENST00000487300 CNKSR2Q8WXI2 1034 aa27.65■■■□□ 2.02
SRM-205ENST00000487300 NEUROD6Q96NK8 337 aa27.65■■■□□ 2.02
SRM-205ENST00000487300 PTPN18Q99952 460 aa27.65■■■□□ 2.02
SRM-205ENST00000487300 NOP58Q9Y2X3 529 aaKnown RBP27.65■■■□□ 2.02
SRM-205ENST00000487300 CSADQ9Y600 493 aa27.65■■■□□ 2.02
SRM-205ENST00000487300 DOCK1Q14185 1865 aa27.64■■■□□ 2.02
SRM-205ENST00000487300 IDI2Q9BXS1 227 aa27.64■■■□□ 2.02
SRM-205ENST00000487300 CENPFP49454 3210 aa27.63■■■□□ 2.01
SRM-205ENST00000487300 PTPRFP10586 1907 aa27.63■■■□□ 2.01
SRM-205ENST00000487300 PHIPQ8WWQ0 1821 aa27.63■■■□□ 2.01
SRM-205ENST00000487300 DCAF15Q66K64 600 aa27.63■■■□□ 2.01
SRM-205ENST00000487300 SPTY2D1Q68D10 685 aaPredicted RBP27.63■■■□□ 2.01
SRM-205ENST00000487300 DZIP1Q86YF9 867 aaKnown RBP27.63■■■□□ 2.01
SRM-205ENST00000487300 SPATA5Q8NB90 893 aa27.63■■■□□ 2.01
SRM-205ENST00000487300 WRNIP1Q96S55 665 aa27.63■■■□□ 2.01
SRM-205ENST00000487300 USP40Q9NVE5 1235 aa27.63■■■□□ 2.01
SRM-205ENST00000487300 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.63■■■□□ 2.01
SRM-205ENST00000487300 ABCF2Q9UG63 623 aa27.63■■■□□ 2.01
SRM-205ENST00000487300 MROH7-TTC4A0A0A0MT08 1334 aa27.63■■■□□ 2.01
SRM-205ENST00000487300 CCDC85CA6NKD9 419 aa27.62■■■□□ 2.01
SRM-205ENST00000487300 TNNI3KQ59H18 835 aa27.62■■■□□ 2.01
SRM-205ENST00000487300 PI16Q6UXB8 463 aa27.62■■■□□ 2.01
SRM-205ENST00000487300 ZNF112Q9UJU3 913 aa27.62■■■□□ 2.01
SRM-205ENST00000487300 FPGT-TNNI3KV9GXZ4 949 aa27.62■■■□□ 2.01
SRM-205ENST00000487300 MCAMP43121 646 aa27.61■■■□□ 2.01
SRM-205ENST00000487300 RGS19P49795 217 aa27.61■■■□□ 2.01
SRM-205ENST00000487300 MECOMQ03112 1051 aa27.61■■■□□ 2.01
SRM-205ENST00000487300 TCP10Q12799 353 aa27.61■■■□□ 2.01
SRM-205ENST00000487300 SLF2Q8IX21 1173 aa27.61■■■□□ 2.01
SRM-205ENST00000487300 ZNF341Q9BYN7 854 aa27.61■■■□□ 2.01
SRM-205ENST00000487300 FKTNO75072 461 aa27.6■■■□□ 2.01
SRM-205ENST00000487300 CEP85Q6P2H3 762 aa27.6■■■□□ 2.01
SRM-205ENST00000487300 PANK1Q8TE04 598 aa27.6■■■□□ 2.01
SRM-205ENST00000487300 BRI3BPQ8WY22 251 aa27.6■■■□□ 2.01
SRM-205ENST00000487300 ZKSCAN4Q969J2 545 aaPredicted RBP27.6■■■□□ 2.01
SRM-205ENST00000487300 ATAD5Q96QE3 1844 aa27.6■■■□□ 2.01
SRM-205ENST00000487300 ENTPD3O75355 529 aa27.59■■■□□ 2.01
SRM-205ENST00000487300 SURF6O75683 361 aaKnown RBP27.59■■■□□ 2.01
SRM-205ENST00000487300 WDHD1O75717 1129 aaPredicted RBP27.59■■■□□ 2.01
SRM-205ENST00000487300 UQCRFS1P1P0C7P4 283 aa27.59■■■□□ 2.01
SRM-205ENST00000487300 PKN2Q16513 984 aaKnown RBP27.59■■■□□ 2.01
SRM-205ENST00000487300 GORABQ5T7V8 394 aa27.59■■■□□ 2.01
SRM-205ENST00000487300 ERICH6Q7L0X2 663 aa27.59■■■□□ 2.01
SRM-205ENST00000487300 ERO1BQ86YB8 467 aa27.59■■■□□ 2.01
SRM-205ENST00000487300 OTUD5Q96G74 571 aa27.59■■■□□ 2.01
SRM-205ENST00000487300 SIPA1L1O43166 1804 aa27.59■■■□□ 2.01
SRM-205ENST00000487300 COL2A1P02458 1487 aaPredicted RBP27.58■■■□□ 2.01
SRM-205ENST00000487300 GPR75-ASB3A0A0A6YYF3 556 aa27.58■■■□□ 2.01
SRM-205ENST00000487300 RGS3P49796 1198 aa27.58■■■□□ 2.01
SRM-205ENST00000487300 GTF2A2P52657 109 aa27.58■■■□□ 2.01
SRM-205ENST00000487300 CRHR2Q13324 411 aa27.58■■■□□ 2.01
SRM-205ENST00000487300 OTUD7BQ6GQQ9 843 aa27.58■■■□□ 2.01
SRM-205ENST00000487300 ZFPM1Q8IX07 1006 aa27.58■■■□□ 2.01
SRM-205ENST00000487300 NSUN4Q96CB9 384 aaKnown RBP27.58■■■□□ 2.01
SRM-205ENST00000487300 BTDP43251 543 aa27.57■■■□□ 2
SRM-205ENST00000487300 RHBDL3P58872 404 aa27.57■■■□□ 2
SRM-205ENST00000487300 MIGA2Q7L4E1 593 aa27.57■■■□□ 2
SRM-205ENST00000487300 ZNF512BQ96KM6 892 aaPredicted RBP27.57■■■□□ 2
SRM-205ENST00000487300 DBNDD2Q9BQY9 259 aa27.57■■■□□ 2
SRM-205ENST00000487300 INPP5BP32019 993 aa27.56■■■□□ 2
SRM-205ENST00000487300 PPIL2Q13356 520 aa27.56■■■□□ 2
SRM-205ENST00000487300 NOL9Q5SY16 702 aaKnown RBP27.56■■■□□ 2
SRM-205ENST00000487300 DDX4Q9NQI0 724 aaKnown RBP27.56■■■□□ 2
SRM-205ENST00000487300 RBBP6Q7Z6E9 1792 aaKnown RBP27.55■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms